Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is pgpA [H]
Identifier: 78355688
GI number: 78355688
Start: 659436
End: 659909
Strand: Direct
Name: pgpA [H]
Synonym: Dde_0641
Alternate gene names: 78355688
Gene position: 659436-659909 (Clockwise)
Preceding gene: 78355687
Following gene: 78355690
Centisome position: 17.68
GC content: 60.97
Gene sequence:
>474_bases ATGACTGAGCAGCGTTCTTTTATGGACAGAACGGCCCTGTTTGTGGCCAGAGGTCTGGGAGCAGGGTTGTTTCCCGTGGC ACCGGGAACATGCGGCACTGCGCTGGGGGCATTGCTGGCTCCCTGGCTGTTTCTGCCGCTGTCTTTTCCCGCGCGCCTTG TGGTGGTGATTCTTGTGTTTATGCTGGGCTGCTGGGCCGCCGACAGAGCGGAACACCTGTTGGGCCGCAAAGACCCCGGC GAGGTGGTTATCGATGAGATTTTCGGCTTGTGGCTTTGTCTGCTGCCTTTTGCGCAGGTGAGCACGCAGGGGCTTGCCTG GGCGTTTGTGCTGTTCCGCATTTTTGACATTGCCAAACCGTGGCCTGTGCGTCAGGCGGAATCGTGGCTGCCGGGCGGCG GCGGCGTGATGATTGACGACGGTGTGGCCGGTCTGTGGGCCATGGTTGTGTTTGCGGCCATACACGGCGTCTGA
Upstream 100 bases:
>100_bases AACAAGACGGACATGCCCCGGATGTGCGGGACTGACACACCTGTCCGGGCGGCGTCGCGGGGTACGCGGTGCGCGGCAGC CGGACGGAGGAGAAGACAAG
Downstream 100 bases:
>100_bases TGATGTCTGCTGCTGCGGCAGGGCCATGACGGGCGCTTCTTTGCCGGAGCGCCGTATGTGGCCTTTGGCCGCAGGGCTGC CGGTTGCCGGTGTGCGCAGT
Product: phosphatidylglycerophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTEQRSFMDRTALFVARGLGAGLFPVAPGTCGTALGALLAPWLFLPLSFPARLVVVILVFMLGCWAADRAEHLLGRKDPG EVVIDEIFGLWLCLLPFAQVSTQGLAWAFVLFRIFDIAKPWPVRQAESWLPGGGGVMIDDGVAGLWAMVVFAAIHGV
Sequences:
>Translated_157_residues MTEQRSFMDRTALFVARGLGAGLFPVAPGTCGTALGALLAPWLFLPLSFPARLVVVILVFMLGCWAADRAEHLLGRKDPG EVVIDEIFGLWLCLLPFAQVSTQGLAWAFVLFRIFDIAKPWPVRQAESWLPGGGGVMIDDGVAGLWAMVVFAAIHGV >Mature_156_residues TEQRSFMDRTALFVARGLGAGLFPVAPGTCGTALGALLAPWLFLPLSFPARLVVVILVFMLGCWAADRAEHLLGRKDPGE VVIDEIFGLWLCLLPFAQVSTQGLAWAFVLFRIFDIAKPWPVRQAESWLPGGGGVMIDDGVAGLWAMVVFAAIHGV
Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786620, Length=145, Percent_Identity=37.2413793103448, Blast_Score=86, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: =3.1.3.27 [H]
Molecular weight: Translated: 16938; Mature: 16807
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQRSFMDRTALFVARGLGAGLFPVAPGTCGTALGALLAPWLFLPLSFPARLVVVILVF CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MLGCWAADRAEHLLGRKDPGEVVIDEIFGLWLCLLPFAQVSTQGLAWAFVLFRIFDIAKP HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WPVRQAESWLPGGGGVMIDDGVAGLWAMVVFAAIHGV CCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TEQRSFMDRTALFVARGLGAGLFPVAPGTCGTALGALLAPWLFLPLSFPARLVVVILVF CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MLGCWAADRAEHLLGRKDPGEVVIDEIFGLWLCLLPFAQVSTQGLAWAFVLFRIFDIAKP HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WPVRQAESWLPGGGGVMIDDGVAGLWAMVVFAAIHGV CCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]