Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355684
Identifier: 78355684
GI number: 78355684
Start: 655986
End: 657356
Strand: Direct
Name: 78355684
Synonym: Dde_0637
Alternate gene names: NA
Gene position: 655986-657356 (Clockwise)
Preceding gene: 78355683
Following gene: 78355687
Centisome position: 17.59
GC content: 59.45
Gene sequence:
>1371_bases ATGGCGTATACGGCAATCCGCCGACGGGTGTCTGTTGCATTGTGCATGGTCTCGGCATGCATTGTATCACTTTGCATGCT GACGGGCGCGGCCGGTCAGGCTTTTGCTGGTTCCGCCGCGGCACAGGCTTTCAACGATGGCCGCACCGTGCTGCGCGTTG CACTGTATCCCGACATTCCCGGTGATCTGGAGTCCATGCTGCGCTGGGTGGAACGGCATTTCGAGGCGGAGAATCCCGAT GTGGATCTTGAACTGGTGGCGGTGCCCGTGATGGACATGTACGAGGTGAGTAATATTGCCTCGTGGCTGACACAGCCCGT GTCCGGCGGAGGCATGCATCTGCTGGAAATAGACAGCCTGCTGCTGGGCGCGGCAGTGGCAACGGGCAGCGTGGCGCAGC AGACGCTGGTCATGCCTGACTGGCATCCGGCAGCCTATGCCACAGCCCATGTGGACGGCAGACAGTACGGGGTGACGCAC TGGCTGTGCGGGTATTTTCTGATGACACCTCACAGGGCCGCCGCAGAGGCTGACAGCATGCAGCAGATGCTGGAAGCATT GCAGATAGTCCGGCCCGAGCCGCCGTATCTGGGGGCGGATTATACCAGCAGCTGGTTCATATCCGGCTATTATCTGCAAA GCTGGATGGACAACTTCGGTCGTGATTCGGTGCGTGTGGGCGTATATGCCCCGGTGAACGAGGTGCCTGCATCGGCTGTG GGCGATGTGGCGCACATGTGCGTCTCGCGGGGGAATAATCCCTGCGTGGACGGTACATACGCTGATTTTTCCGTCATGGT TGCTGACGCTCTGCAGGGCAGACTTGCAGGTCTTGCCGGTTTTTCCGAGACCATGCGCGAGGTGGTGGCGCAGGGCGGCG ATGCTGCGGACTGGTATGTCACGCCGTTTGTGCTGGGGCCGGAAAAAGACATGATGCTGATGTCCGACGTGTTCGTGGGC CGGAAAAATATGACACCGGATGAAACGGACGCTGCGGAGCGTTTCATGCGTTTTATGCTTGAAGACAGCACCTATGCCGG AATTCTGTTTCCTCAGGGTGCGCCGCCGCGGTATGTGATTCCCGCAAGAATGGATGTGCTGCAGGAAGGGCCTTTTGCAG CAGATGTCTATTACAGCCGCCTGCGCGATGCTATCCGTACGGCGGGACATTTTCCCAATCAGGGAGTGCCGGAGAACAGA GAGCGGATTTTCAGCGGTGTGCTGCCGTACCTGCGGGACGATGCCCTGCCGGAGGATTTTCCTGCCAAGGACGTAAAGAG AACGTCAGTGCCTGTGCACCGCAAGGCCCGCTGGCAGCGGCACAAGGGACATTTTGTTGTGGATGAACCCATGCTGCCGC TGCATCCGTAG
Upstream 100 bases:
>100_bases CGCGCGTATATATCCGGTAATACTCTGCCTTGGCCCGGCGGTATGCATTGTGCCGCCGTGCAATCCGTTACTGCAACCAG TATAAAAGGGGGTGAACGTG
Downstream 100 bases:
>100_bases CCCCGTGCCACCGCATGTTGCGGCTGTAAGGGCAGCCCCTGCCCCGCGGCGCGGAGAAGCGGCCCCGTATATGCGGGTAT CTGCAGACAGCAGGCTTATA
Product: ABC-type sugar transport system periplasmic component-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MAYTAIRRRVSVALCMVSACIVSLCMLTGAAGQAFAGSAAAQAFNDGRTVLRVALYPDIPGDLESMLRWVERHFEAENPD VDLELVAVPVMDMYEVSNIASWLTQPVSGGGMHLLEIDSLLLGAAVATGSVAQQTLVMPDWHPAAYATAHVDGRQYGVTH WLCGYFLMTPHRAAAEADSMQQMLEALQIVRPEPPYLGADYTSSWFISGYYLQSWMDNFGRDSVRVGVYAPVNEVPASAV GDVAHMCVSRGNNPCVDGTYADFSVMVADALQGRLAGLAGFSETMREVVAQGGDAADWYVTPFVLGPEKDMMLMSDVFVG RKNMTPDETDAAERFMRFMLEDSTYAGILFPQGAPPRYVIPARMDVLQEGPFAADVYYSRLRDAIRTAGHFPNQGVPENR ERIFSGVLPYLRDDALPEDFPAKDVKRTSVPVHRKARWQRHKGHFVVDEPMLPLHP
Sequences:
>Translated_456_residues MAYTAIRRRVSVALCMVSACIVSLCMLTGAAGQAFAGSAAAQAFNDGRTVLRVALYPDIPGDLESMLRWVERHFEAENPD VDLELVAVPVMDMYEVSNIASWLTQPVSGGGMHLLEIDSLLLGAAVATGSVAQQTLVMPDWHPAAYATAHVDGRQYGVTH WLCGYFLMTPHRAAAEADSMQQMLEALQIVRPEPPYLGADYTSSWFISGYYLQSWMDNFGRDSVRVGVYAPVNEVPASAV GDVAHMCVSRGNNPCVDGTYADFSVMVADALQGRLAGLAGFSETMREVVAQGGDAADWYVTPFVLGPEKDMMLMSDVFVG RKNMTPDETDAAERFMRFMLEDSTYAGILFPQGAPPRYVIPARMDVLQEGPFAADVYYSRLRDAIRTAGHFPNQGVPENR ERIFSGVLPYLRDDALPEDFPAKDVKRTSVPVHRKARWQRHKGHFVVDEPMLPLHP >Mature_455_residues AYTAIRRRVSVALCMVSACIVSLCMLTGAAGQAFAGSAAAQAFNDGRTVLRVALYPDIPGDLESMLRWVERHFEAENPDV DLELVAVPVMDMYEVSNIASWLTQPVSGGGMHLLEIDSLLLGAAVATGSVAQQTLVMPDWHPAAYATAHVDGRQYGVTHW LCGYFLMTPHRAAAEADSMQQMLEALQIVRPEPPYLGADYTSSWFISGYYLQSWMDNFGRDSVRVGVYAPVNEVPASAVG DVAHMCVSRGNNPCVDGTYADFSVMVADALQGRLAGLAGFSETMREVVAQGGDAADWYVTPFVLGPEKDMMLMSDVFVGR KNMTPDETDAAERFMRFMLEDSTYAGILFPQGAPPRYVIPARMDVLQEGPFAADVYYSRLRDAIRTAGHFPNQGVPENRE RIFSGVLPYLRDDALPEDFPAKDVKRTSVPVHRKARWQRHKGHFVVDEPMLPLHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50210; Mature: 50079
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTAIRRRVSVALCMVSACIVSLCMLTGAAGQAFAGSAAAQAFNDGRTVLRVALYPDIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHCCCCEEEEEEECCCCC GDLESMLRWVERHFEAENPDVDLELVAVPVMDMYEVSNIASWLTQPVSGGGMHLLEIDSL CCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH LLGAAVATGSVAQQTLVMPDWHPAAYATAHVDGRQYGVTHWLCGYFLMTPHRAAAEADSM HHHHHHHCCHHHHHEECCCCCCCHHEEEEECCCCHHCHHHHHHHHHHHCCCHHHHHHHHH QQMLEALQIVRPEPPYLGADYTSSWFISGYYLQSWMDNFGRDSVRVGVYAPVNEVPASAV HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCHHHH GDVAHMCVSRGNNPCVDGTYADFSVMVADALQGRLAGLAGFSETMREVVAQGGDAADWYV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE TPFVLGPEKDMMLMSDVFVGRKNMTPDETDAAERFMRFMLEDSTYAGILFPQGAPPRYVI EEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEC PARMDVLQEGPFAADVYYSRLRDAIRTAGHFPNQGVPENRERIFSGVLPYLRDDALPEDF CHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PAKDVKRTSVPVHRKARWQRHKGHFVVDEPMLPLHP CCCHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure AYTAIRRRVSVALCMVSACIVSLCMLTGAAGQAFAGSAAAQAFNDGRTVLRVALYPDIP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHCCCCEEEEEEECCCCC GDLESMLRWVERHFEAENPDVDLELVAVPVMDMYEVSNIASWLTQPVSGGGMHLLEIDSL CCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH LLGAAVATGSVAQQTLVMPDWHPAAYATAHVDGRQYGVTHWLCGYFLMTPHRAAAEADSM HHHHHHHCCHHHHHEECCCCCCCHHEEEEECCCCHHCHHHHHHHHHHHCCCHHHHHHHHH QQMLEALQIVRPEPPYLGADYTSSWFISGYYLQSWMDNFGRDSVRVGVYAPVNEVPASAV HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCHHHH GDVAHMCVSRGNNPCVDGTYADFSVMVADALQGRLAGLAGFSETMREVVAQGGDAADWYV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE TPFVLGPEKDMMLMSDVFVGRKNMTPDETDAAERFMRFMLEDSTYAGILFPQGAPPRYVI EEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEC PARMDVLQEGPFAADVYYSRLRDAIRTAGHFPNQGVPENRERIFSGVLPYLRDDALPEDF CHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PAKDVKRTSVPVHRKARWQRHKGHFVVDEPMLPLHP CCCHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA