Click here to switch to the map view.

The map label for this gene is yiaN [C]

Identifier: 78355683

GI number: 78355683

Start: 654558

End: 655859

Strand: Direct

Name: yiaN [C]

Synonym: Dde_0636

Alternate gene names: 78355683

Gene position: 654558-655859 (Clockwise)

Preceding gene: 78355682

Following gene: 78355684

Centisome position: 17.55

GC content: 60.45

Gene sequence:

>1302_bases
GTGGAGCCGGTGACTCTGGGGGTTCTTTCCGTAGGTGTTCTTCTGGCGGCCATTCTGGCATCACGCATTCCGGTGGGGTT
TGCCATGGCGGTCACGGGGCTTGGCGGGTATGCCGCAGCCATGGGGCCTGCTGCCGCATGGTCCATGCTGGGGGGCGAAG
TGTGGGAGGTGTTTTCCTCTTACGGGCTTACGGTTATCCCGTTTTTCATTTTCATGGGGCAGATCTGTTTTTATTCCGGC
GTCAACGAACGCCTGTACAGGGCGGTATATGCATGGATGGGACATATCCGCGGGGGCATAGCCTACGCAACGGTGCTTGC
CTGTGCGGGGTTTTCGGCCATCTGCGGGTCAAATACCGCCACGGCCGCCACCATGTCTGCCGTGGCCCTGCCGGAAATGA
AAAAATACGGCTATGCACCGGTGCTTTCCACCGGCTGCGTGGCGGCAGGAGCCACTCTGGGGGTGCTGATTCCGCCCAGC
GTGGTGCTCATTGTCATCGGGCTGCAGACCGGTCTTTCCATTTCCACGCTGTTTATGGCGGGCATTATGCCCGGCCTGCT
GCTTACGGGGCTTTTTCTGGCTGTGGTCTGGCTGTTGTGCCGGCGGCACCCTCAGTGGGGTCCGGCCGGAGAAAAAAGCA
GCTGGCGCAGCAGAATGCGCGCACTACCCGGCGCGGGCGAGATTCTGATTCTTTTTGTTCTTGTCATAGGCGGGCTGTTC
ATGGGGGTGTTCACCCCCACGGAGGCAGGTGCTGCGGGGTCGGCCATTGCTCTGCTGCTCAGCCTTGCGGGGCGCAGGCT
GTCGTTGCGGGGGCTGGTGGATGCTGTAAACGACACGCTGCGTATTTCCAGCATGATTATGGTCATCATTCTGGGGGCCG
TGCTGTACGGGCGCTTTCTGGCCGTAACCCGTCTGCCATTTGCCGTGGCGGAGTGGACGGCTTCGCTGCCGCTGCCGCCG
CTGGGCATTCTGCTGCTGATCTGCGGGGTGTACATTGTGGGCGGCATGATGATGGATGCGCTGGCGTTGCTGCTGGTCAC
CATTCCCATTTTCTTTCCGGTGGTGCAGGCCATGGGGTACGACCCCGTGTGGTTCAGTGTGTTCATTACCGTGATAACCA
CCATGGGGGCCATCACGCCGCCTGTGGGGGTGACCGCGTTTGTGGTGGCCTCCGCTGCCGGAGACGTGGGAGTGCAGGAT
GTCTTCAGAGGGGTGACCTTTTTTCTGGCGGCGTATGCGGTATGTGCTCTGCTGTTGCTGCTGGTGCCCCAGATAGTTCT
TTTTATACCATCCCTTATGTAA

Upstream 100 bases:

>100_bases
GCCCCGTTTGTCTATGTGGTGTCGGCCGGTTGCGGGGTTATGGCGTATATTCTTTCGGTTTCGTTTCTGAAAACCGTTCT
TCTGGGCAGAGAGGTGTGAT

Downstream 100 bases:

>100_bases
ATAATTAGCTTGTCGATGCGGTACTGCGCGCGTATATATCCGGTAATACTCTGCCTTGGCCCGGCGGTATGCATTGTGCC
GCCGTGCAATCCGTTACTGC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MEPVTLGVLSVGVLLAAILASRIPVGFAMAVTGLGGYAAAMGPAAAWSMLGGEVWEVFSSYGLTVIPFFIFMGQICFYSG
VNERLYRAVYAWMGHIRGGIAYATVLACAGFSAICGSNTATAATMSAVALPEMKKYGYAPVLSTGCVAAGATLGVLIPPS
VVLIVIGLQTGLSISTLFMAGIMPGLLLTGLFLAVVWLLCRRHPQWGPAGEKSSWRSRMRALPGAGEILILFVLVIGGLF
MGVFTPTEAGAAGSAIALLLSLAGRRLSLRGLVDAVNDTLRISSMIMVIILGAVLYGRFLAVTRLPFAVAEWTASLPLPP
LGILLLICGVYIVGGMMMDALALLLVTIPIFFPVVQAMGYDPVWFSVFITVITTMGAITPPVGVTAFVVASAAGDVGVQD
VFRGVTFFLAAYAVCALLLLLVPQIVLFIPSLM

Sequences:

>Translated_433_residues
MEPVTLGVLSVGVLLAAILASRIPVGFAMAVTGLGGYAAAMGPAAAWSMLGGEVWEVFSSYGLTVIPFFIFMGQICFYSG
VNERLYRAVYAWMGHIRGGIAYATVLACAGFSAICGSNTATAATMSAVALPEMKKYGYAPVLSTGCVAAGATLGVLIPPS
VVLIVIGLQTGLSISTLFMAGIMPGLLLTGLFLAVVWLLCRRHPQWGPAGEKSSWRSRMRALPGAGEILILFVLVIGGLF
MGVFTPTEAGAAGSAIALLLSLAGRRLSLRGLVDAVNDTLRISSMIMVIILGAVLYGRFLAVTRLPFAVAEWTASLPLPP
LGILLLICGVYIVGGMMMDALALLLVTIPIFFPVVQAMGYDPVWFSVFITVITTMGAITPPVGVTAFVVASAAGDVGVQD
VFRGVTFFLAAYAVCALLLLLVPQIVLFIPSLM
>Mature_433_residues
MEPVTLGVLSVGVLLAAILASRIPVGFAMAVTGLGGYAAAMGPAAAWSMLGGEVWEVFSSYGLTVIPFFIFMGQICFYSG
VNERLYRAVYAWMGHIRGGIAYATVLACAGFSAICGSNTATAATMSAVALPEMKKYGYAPVLSTGCVAAGATLGVLIPPS
VVLIVIGLQTGLSISTLFMAGIMPGLLLTGLFLAVVWLLCRRHPQWGPAGEKSSWRSRMRALPGAGEILILFVLVIGGLF
MGVFTPTEAGAAGSAIALLLSLAGRRLSLRGLVDAVNDTLRISSMIMVIILGAVLYGRFLAVTRLPFAVAEWTASLPLPP
LGILLLICGVYIVGGMMMDALALLLVTIPIFFPVVQAMGYDPVWFSVFITVITTMGAITPPVGVTAFVVASAAGDVGVQD
VFRGVTFFLAAYAVCALLLLLVPQIVLFIPSLM

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=350, Percent_Identity=30.5714285714286, Blast_Score=140, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45184; Mature: 45184

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPVTLGVLSVGVLLAAILASRIPVGFAMAVTGLGGYAAAMGPAAAWSMLGGEVWEVFSS
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YGLTVIPFFIFMGQICFYSGVNERLYRAVYAWMGHIRGGIAYATVLACAGFSAICGSNTA
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCH
TAATMSAVALPEMKKYGYAPVLSTGCVAAGATLGVLIPPSVVLIVIGLQTGLSISTLFMA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCEECCCHHHHHHHHHHCCCHHHHHHHH
GIMPGLLLTGLFLAVVWLLCRRHPQWGPAGEKSSWRSRMRALPGAGEILILFVLVIGGLF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
MGVFTPTEAGAAGSAIALLLSLAGRRLSLRGLVDAVNDTLRISSMIMVIILGAVLYGRFL
HHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTRLPFAVAEWTASLPLPPLGILLLICGVYIVGGMMMDALALLLVTIPIFFPVVQAMGY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPVWFSVFITVITTMGAITPPVGVTAFVVASAAGDVGVQDVFRGVTFFLAAYAVCALLLL
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVPQIVLFIPSLM
HHHHHHHHHCCCC
>Mature Secondary Structure
MEPVTLGVLSVGVLLAAILASRIPVGFAMAVTGLGGYAAAMGPAAAWSMLGGEVWEVFSS
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YGLTVIPFFIFMGQICFYSGVNERLYRAVYAWMGHIRGGIAYATVLACAGFSAICGSNTA
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCH
TAATMSAVALPEMKKYGYAPVLSTGCVAAGATLGVLIPPSVVLIVIGLQTGLSISTLFMA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCEECCCHHHHHHHHHHCCCHHHHHHHH
GIMPGLLLTGLFLAVVWLLCRRHPQWGPAGEKSSWRSRMRALPGAGEILILFVLVIGGLF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
MGVFTPTEAGAAGSAIALLLSLAGRRLSLRGLVDAVNDTLRISSMIMVIILGAVLYGRFL
HHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVTRLPFAVAEWTASLPLPPLGILLLICGVYIVGGMMMDALALLLVTIPIFFPVVQAMGY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DPVWFSVFITVITTMGAITPPVGVTAFVVASAAGDVGVQDVFRGVTFFLAAYAVCALLLL
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVPQIVLFIPSLM
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]