Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355672
Identifier: 78355672
GI number: 78355672
Start: 644421
End: 645134
Strand: Direct
Name: 78355672
Synonym: Dde_0625
Alternate gene names: NA
Gene position: 644421-645134 (Clockwise)
Preceding gene: 78355671
Following gene: 78355679
Centisome position: 17.28
GC content: 63.73
Gene sequence:
>714_bases ATGGCATTCCAGGGGCTTAACCCTTGGGTGACGCTGCTGCATACCTTCGGGTACGCCAGCCTGTTTCAGGTGCTGTTCAA CGTGATTGCCGCGCTGTTTGTTCCTTCATGGGGGCTGGGCGTCATGAGCATACAAGGCATGAATATGGAACCGGGGTGCT GGGTGGCCATGCTGGCTCTTGCTGTGGGTCCCACGCTGCTGGGTATGGGTATGTACAACGTGTCGCTGGGCATGCTCTCT GTAGGGGTGGCCAACACCATCCTGCTGCTTGAACCGGCGCTGGCCGCCACTTTTGCCTATTTTACCATCGGCGAGATGCT TACACCCATGCAGTGGGCCGGCATAGCCATGATAACCGGCGGTGTGGCCGTTCTGCCCCGTTCATCTTCGCCTGCCCGGC TGACAGAAGAACACGCGGCGGCCGTGGCAGACGCCGTGGGTGCCGTGGGTGCGGCTGTTCAGGCTGTGCCCGGAGTGGTG GGCAACGCCGTGCAGTCGTTGCCGGAAGTGCTGCCCGATGCCATAACCGATGCCGTGACAGCCGCTGTGAACGCCGTGCC GGGGGCAGTGGACGCAGTGGTGCAGGCAGTTGCCGCACCGCAGGGGCAGACAGCAGCTGCCGGTATGACCGCAGCGACAC AGGCTGCGGCCTGCACCGGCACAGACAGGCCGGTTTCTCCGGCCATGGGCGGTGCCGCCGTGCACAGTGCGTAA
Upstream 100 bases:
>100_bases CCTTTCTTGGCTACCAAAGTCCGGAGGCATTCGAACAATTGTTTTATCAGGCCAAGCAAAAACAGGCGGCGTAATCTCTC GGCCACTGTCCGTTTTTCTT
Downstream 100 bases:
>100_bases GCGCGCCGCCGGATGTTTTCTGTCGCCGGATGTCTTTCGCCGGATGTCTTCCGCCGGATGTCTTCCGCCGCATGTGTGAA TGCGGCCGTTACTGTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MAFQGLNPWVTLLHTFGYASLFQVLFNVIAALFVPSWGLGVMSIQGMNMEPGCWVAMLALAVGPTLLGMGMYNVSLGMLS VGVANTILLLEPALAATFAYFTIGEMLTPMQWAGIAMITGGVAVLPRSSSPARLTEEHAAAVADAVGAVGAAVQAVPGVV GNAVQSLPEVLPDAITDAVTAAVNAVPGAVDAVVQAVAAPQGQTAAAGMTAATQAAACTGTDRPVSPAMGGAAVHSA
Sequences:
>Translated_237_residues MAFQGLNPWVTLLHTFGYASLFQVLFNVIAALFVPSWGLGVMSIQGMNMEPGCWVAMLALAVGPTLLGMGMYNVSLGMLS VGVANTILLLEPALAATFAYFTIGEMLTPMQWAGIAMITGGVAVLPRSSSPARLTEEHAAAVADAVGAVGAAVQAVPGVV GNAVQSLPEVLPDAITDAVTAAVNAVPGAVDAVVQAVAAPQGQTAAAGMTAATQAAACTGTDRPVSPAMGGAAVHSA >Mature_236_residues AFQGLNPWVTLLHTFGYASLFQVLFNVIAALFVPSWGLGVMSIQGMNMEPGCWVAMLALAVGPTLLGMGMYNVSLGMLSV GVANTILLLEPALAATFAYFTIGEMLTPMQWAGIAMITGGVAVLPRSSSPARLTEEHAAAVADAVGAVGAAVQAVPGVVG NAVQSLPEVLPDAITDAVTAAVNAVPGAVDAVVQAVAAPQGQTAAAGMTAATQAAACTGTDRPVSPAMGGAAVHSA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23631; Mature: 23500
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFQGLNPWVTLLHTFGYASLFQVLFNVIAALFVPSWGLGVMSIQGMNMEPGCWVAMLAL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH AVGPTLLGMGMYNVSLGMLSVGVANTILLLEPALAATFAYFTIGEMLTPMQWAGIAMITG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEC GVAVLPRSSSPARLTEEHAAAVADAVGAVGAAVQAVPGVVGNAVQSLPEVLPDAITDAVT CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVNAVPGAVDAVVQAVAAPQGQTAAAGMTAATQAAACTGTDRPVSPAMGGAAVHSA HHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure AFQGLNPWVTLLHTFGYASLFQVLFNVIAALFVPSWGLGVMSIQGMNMEPGCWVAMLAL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH AVGPTLLGMGMYNVSLGMLSVGVANTILLLEPALAATFAYFTIGEMLTPMQWAGIAMITG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHEEC GVAVLPRSSSPARLTEEHAAAVADAVGAVGAAVQAVPGVVGNAVQSLPEVLPDAITDAVT CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAVNAVPGAVDAVVQAVAAPQGQTAAAGMTAATQAAACTGTDRPVSPAMGGAAVHSA HHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA