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The map label for this gene is dsvB [H]

Identifier: 78355574

GI number: 78355574

Start: 533423

End: 534568

Strand: Direct

Name: dsvB [H]

Synonym: Dde_0527

Alternate gene names: 78355574

Gene position: 533423-534568 (Clockwise)

Preceding gene: 78355573

Following gene: 304570580

Centisome position: 14.3

GC content: 57.33

Gene sequence:

>1146_bases
ATGGCATTCATCTCTTCTGGATACAATCCCGAAAAACCGATGGAAGGTCGGATTACCGACATTGGCCCGCAGCATTACGC
ACAGTTCTACCCGCCTGTTATCGCACGTAACAAGGGTAAGTGGCTGTACCACGAAATCATCGAACCCGGCGTTCTGGTGC
ACGTGGCTGAATCCGGCGAAAAAGTGTACACCGTCCGTGTGGGCGCTGCACGTCTGATGTCCATCACCCACATCCGCGAA
ATCTGCGAAATCGCAGACAAGCATTGCGGCGGACATCTGCGTTTCACCACCCGTAACAACGTTGAATTCATGGTGGAAAC
CGAAGAAGCCATGAAAGCTCTGCGTGACGACCTTGCTTCGCGCAAGTTCGACGGTGGTTCCAAGAAGTTCCCCGTGGGCG
GCACCGGTGCTGGTATTTCCAACATCGTGCACACTCAGGGCTGGGTACACTGCCACACCCCCGCCACCGACGCTTCCGGT
CCGGTTAAGGCCATCATGGACGAAGTCTTCGAAGACTTCCAGAGCATGCGCCTTCCCGCTCCCGTGCGTATTTCGCTGGC
CTGCTGCATCAACATGTGCGGCGCCGTTCACTGCTCCGACATCGGCGTTGTGGGTATCCACCGCAAGCCCCCGATGATCG
ACCACGCATGGACCGACCAGCTGTGCGAAATCCCGCTGGCCGTTGCTTCCTGCCCCACCGCCGCTGTTCGTCCCACCAAG
GTTGAACTGGACGGCAAAAAGGTGAACAGCATCGCCATCAAGAACGAACGCTGCATGTACTGCGGTAACTGCTACACCAT
GTGCCCCGCACTGCCCATCTCCGACGGTGAAGGCGACGGTTGCGTGATCATGGTCGGCGGTAAGGTTTCCAACCGTATCA
GCATGCCCAAGTTCTCCAAGGTTGTGGTTGCGTACATCCCCAACGAGGCTCCTCGCTGGCCCACGCTGACCAATACCATC
AAGCACATCATCGAAGTCTACTCGGAAAACGCTATGAAATACGAGCGTCTGGGCGACTGGGCTGAACGTATCGGCTGGGA
ACGCTTCTTCCAGCTGACCGGTCTTGAGTTCACCCACCACCTGATCGACGACTTCCGCGATCCGGCCTACTACACCTGGC
GTCAGAGCACCCAGTTCAAGTTCTAG

Upstream 100 bases:

>100_bases
CATCTTCTTCAAGGAAGAAGAAGTTCCCGGTGGTTGGGATCGTGACATCACGGAATACCGTAAGAGACACCAGCGCTAAA
CTTAAGAGGGGTACCCAAAA

Downstream 100 bases:

>100_bases
GCCACTGAGCCAATTATGCCGGGCGGAGATTTTCTCCGCCCGGTTCATCCCAGAGAGGATACAATCATGGATGACAAGCA
GATTATTGTGGACTTCATCG

Product: sulfite reductase, dissimilatory-type subunit beta

Products: NA

Alternate protein names: Desulfoviridin subunit beta; Hydrogensulfite reductase subunit beta [H]

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAFISSGYNPEKPMEGRITDIGPQHYAQFYPPVIARNKGKWLYHEIIEPGVLVHVAESGEKVYTVRVGAARLMSITHIRE
ICEIADKHCGGHLRFTTRNNVEFMVETEEAMKALRDDLASRKFDGGSKKFPVGGTGAGISNIVHTQGWVHCHTPATDASG
PVKAIMDEVFEDFQSMRLPAPVRISLACCINMCGAVHCSDIGVVGIHRKPPMIDHAWTDQLCEIPLAVASCPTAAVRPTK
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGCVIMVGGKVSNRISMPKFSKVVVAYIPNEAPRWPTLTNTI
KHIIEVYSENAMKYERLGDWAERIGWERFFQLTGLEFTHHLIDDFRDPAYYTWRQSTQFKF

Sequences:

>Translated_381_residues
MAFISSGYNPEKPMEGRITDIGPQHYAQFYPPVIARNKGKWLYHEIIEPGVLVHVAESGEKVYTVRVGAARLMSITHIRE
ICEIADKHCGGHLRFTTRNNVEFMVETEEAMKALRDDLASRKFDGGSKKFPVGGTGAGISNIVHTQGWVHCHTPATDASG
PVKAIMDEVFEDFQSMRLPAPVRISLACCINMCGAVHCSDIGVVGIHRKPPMIDHAWTDQLCEIPLAVASCPTAAVRPTK
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGCVIMVGGKVSNRISMPKFSKVVVAYIPNEAPRWPTLTNTI
KHIIEVYSENAMKYERLGDWAERIGWERFFQLTGLEFTHHLIDDFRDPAYYTWRQSTQFKF
>Mature_380_residues
AFISSGYNPEKPMEGRITDIGPQHYAQFYPPVIARNKGKWLYHEIIEPGVLVHVAESGEKVYTVRVGAARLMSITHIREI
CEIADKHCGGHLRFTTRNNVEFMVETEEAMKALRDDLASRKFDGGSKKFPVGGTGAGISNIVHTQGWVHCHTPATDASGP
VKAIMDEVFEDFQSMRLPAPVRISLACCINMCGAVHCSDIGVVGIHRKPPMIDHAWTDQLCEIPLAVASCPTAAVRPTKV
ELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGCVIMVGGKVSNRISMPKFSKVVVAYIPNEAPRWPTLTNTIK
HIIEVYSENAMKYERLGDWAERIGWERFFQLTGLEFTHHLIDDFRDPAYYTWRQSTQFKF

Specific function: Catalyzes the reduction of sulfite to sulfide. This is the terminal oxidation reaction in sulfate respiration, a process catalyzed by the sulfate-reducing bacteria [H]

COG id: COG2221

COG function: function code C; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011808
- InterPro:   IPR005117
- InterPro:   IPR006067 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.8.99.3 [H]

Molecular weight: Translated: 42583; Mature: 42451

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFISSGYNPEKPMEGRITDIGPQHYAQFYPPVIARNKGKWLYHEIIEPGVLVHVAESGE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCHHHHHCCCCEEEEEECCCC
KVYTVRVGAARLMSITHIREICEIADKHCGGHLRFTTRNNVEFMVETEEAMKALRDDLAS
EEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHHHHHHHHHHH
RKFDGGSKKFPVGGTGAGISNIVHTQGWVHCHTPATDASGPVKAIMDEVFEDFQSMRLPA
CCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
PVRISLACCINMCGAVHCSDIGVVGIHRKPPMIDHAWTDQLCEIPLAVASCPTAAVRPTK
CCEEHHHHHHHHHCCCEECCCCEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCEE
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGCVIMVGGKVSNRISMPKFSK
EEECCCEEEEEEEECCCEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
VVVAYIPNEAPRWPTLTNTIKHIIEVYSENAMKYERLGDWAERIGWERFFQLTGLEFTHH
EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LIDDFRDPAYYTWRQSTQFKF
HHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
AFISSGYNPEKPMEGRITDIGPQHYAQFYPPVIARNKGKWLYHEIIEPGVLVHVAESGE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCHHHHHCCCCEEEEEECCCC
KVYTVRVGAARLMSITHIREICEIADKHCGGHLRFTTRNNVEFMVETEEAMKALRDDLAS
EEEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECHHHHHHHHHHHHH
RKFDGGSKKFPVGGTGAGISNIVHTQGWVHCHTPATDASGPVKAIMDEVFEDFQSMRLPA
CCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
PVRISLACCINMCGAVHCSDIGVVGIHRKPPMIDHAWTDQLCEIPLAVASCPTAAVRPTK
CCEEHHHHHHHHHCCCEECCCCEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCEE
VELDGKKVNSIAIKNERCMYCGNCYTMCPALPISDGEGDGCVIMVGGKVSNRISMPKFSK
EEECCCEEEEEEEECCCEEEECCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
VVVAYIPNEAPRWPTLTNTIKHIIEVYSENAMKYERLGDWAERIGWERFFQLTGLEFTHH
EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LIDDFRDPAYYTWRQSTQFKF
HHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7887608; 1555572 [H]