| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is iorA [H]
Identifier: 78355514
GI number: 78355514
Start: 476519
End: 479017
Strand: Direct
Name: iorA [H]
Synonym: Dde_0467
Alternate gene names: 78355514
Gene position: 476519-479017 (Clockwise)
Preceding gene: 78355513
Following gene: 78355515
Centisome position: 12.77
GC content: 60.46
Gene sequence:
>2499_bases GTGAATCCCATTGAGAAACTGTGTAGGGACGAGGCCGGCAACTCTGCCGTGCTTCAGGGGAACATCGCTTTTGCCGTGGG CTGCGTGCGCGCCGGCATCCATGCCGCGGACGGTTATCCCGGCACACCCAGTTCCGAAGTGATAGATAAAGGCCTTTCGC AGGTGCAGGACATGATCACCGTGGGATGGTCCGTCAGCGAGGCCGTGGCCGCCGGTGTGGGGCACGGACATTCTCTGGCC GGACGCGACTGCGTCGTGACCATGAAAATACCCGGCCTGTATCAGGCGGGTGACATATTCACCAGCGTGGCCACCTATAC CGCTGACCGCGGCGGGCTGATATTTTATGTGGCCGCCGACTATACACCCAGTTCCACGCAGCACGTCATCGACCCCCGCT ACCTGTACAAAAGCTGCTTTGTTCCCGTTTTCGAGCCGCGAACCCATCAGGAACTGCACGAGTCGGCGCTGGTGGCGGTG GAAATAGCCCGCCGGTTCAATACGCCCGTGGTTATCCAGCCCAGCGGCGTGCTGTGCCACAGCGAAGGCCTCGTGCGCAT GATGCCCGTCACTTCCCGCGAGCCTGCTCCGGTGTCTCCGCTGCGGCTGCAGAACTCTCTGCCCGTGTTTGCCCGCGCCA ACTACGACAAAGTGATGGCCGAACGCATGCCCGGTCTGCTGGAAATGGTGGAGCAGAGCCCCCTCAATGTGCATATCAAA GGTTCGGGCAAGCGCGGTGTCATCACCCACGGCATCAACTCCATGTACATGGATGAGTACCGGGCGCTGTTCGACAAGGA CATCGATATCCTCTCGCTGGGATTCACCAACCCGCTGCCCATGGAAAAAATCCGCAATTTCTGCGAATCCATCGAAGGCG AAGTTTTTGTCATCGAGGACGGCTACCGCTTTATTCAGGAAGCATGCGGTGCCGCAGGTCTGAAGGTGACCGGCAAGGAA GAATACAGCAACGTGACGGAATGGACGCCTGCCAGCATTGCGGCATTTCTGGGCCAGCAGGCCACGGCGGCTCCCCGTCC GCAGGCTGCGCCTGTGCCGCGTCCGCCCATGATATGCGCCGGATGCCCGTACCGCCTGTTCGGCGAAGTGGTTGCCCGTA TGAAGCGCAAAGGCGAGATTGAAGCCGTTTTCGGTGACATAGGCTGTAATACGCTGCTGTATTTTCTGGGTGCGCTTGAT ACAGGCCTTGCCATGGGCGCCAGCGAAAGCAAGCGTACCGGCTATGTTCTTTCCAAGCCCGAATCGGTGAGCAAATGCAT CAGCCTGCTGGGCGACGGCACAGAATGCCACAGCGGCATGGATGCCACCAGAAATGCCGTGTTCCGCAACGTGGCCGGTG TAAAGGTGGTGCTGGACAACGAATGGACAGCCATGACCGGCGGTCAGCCCGGTCCTACTTCTCCCGTCAACCTTGCGGGC GACCCCACACGGTTTGATCTTGTGGCATCGCTCAAGGCGCAGGGGGCGGAAGTGGCGCTCATCGACGCATACGACATGAA AAGCGTGCGCAAAGGGCTCAGGGCAGCGTTGAAAGCCGCGGAAGACGGCACCTTTACCACGCTTGTCATCCGCGGCACCT GTATCCGCAAGGTACCCGCAGCCGATTACGGCCAGAAGCTTATCGTGGATACCGAAAAATGCGTGCAGTGCGGCGCGTGC AATATCTGCTCGGGCATTCAGCCTGATGAAAACGGTGTGCCTTTCTGGAACAACCTGTGCACCGGCTGCGTTTCCAAGAC TCCGGCCTGTCTGCAGATGTGCCCCAAGGGTGCCATAGCGGTGGATACGGAATGCAGCACCGGCGCCTGTGCCGAAAAGC CCGTACTGCCCGAAGCTCCTGAACATATCGATGTGCCTGTGCTTACCGATGCCCAGCGTCCCGCTCGTCTCAGCCTCGGC ATCCGCGGTGTGGGCGGGCAGGGCAACCTGTTCTTCGGCAAGGCGCTGGCGCAGATGGCGTTCATCGCCGGTTACGGCGA AAAGAATATCCTGAAGGGCGAAACCCACGGTATGGCCCAGATGGGCGGTCCCGTCATTTCCACATTTGCCTGCGGCGACG TGCACAGCACCCAGTTTGTGCCGGGTACGGCTGATGCGCTTATCGTCATGGAGCAAAGCGAAGTGCTGCGCCCCGGTTTT CTTGATATGCTGCGCCCCGAAGGCACTGTTCTGCTGGCGGAAACCGTCATTGTGCCGCAGGGCTTCGACCCGGAAAAATA CCCCACCAGACAGGCCATTGACGAGCTGCTTTCGGGCTGCAACGTGGTGCGTATAGACGTGCTGAAGATGGCCCTTGCAC TGGGAGACGAACGCGGCCGCTGCGCCAACGTGGTCATGCTGGGTGCGCTCAGCAGGCTGTCGCCGTTTGACGCCTTCCCC GTTGAGGTATGGCTGCAGGCGCTTAAAAAAGTCAGCCCCCGTCCCGCGGTATGGACGCTGAACCACGCCGCCTTTCTGCA GGGGCGCACACTGGTGTAG
Upstream 100 bases:
>100_bases AAGACAGGGGCGGTTCTCAGCCGCCCTATCTGCAGCATTGTGGCGGCAGGTTCCCCGACAGGAGTCAGGAGAGCGAACTT ATTTTTCCGGAGGATAAACC
Downstream 100 bases:
>100_bases GCCCATGTGATACCAAGGCCCGGAGTGTGACGCTTCGGGCCTTTTTTTACCCCGCAACACACTGTAAAAAATTTGAAAGA GCCTCCGCATGAGCATGACC
Product: pyruvate ferredoxin/flavodoxin oxidoreductase family protein
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 832; Mature: 832
Protein sequence:
>832_residues MNPIEKLCRDEAGNSAVLQGNIAFAVGCVRAGIHAADGYPGTPSSEVIDKGLSQVQDMITVGWSVSEAVAAGVGHGHSLA GRDCVVTMKIPGLYQAGDIFTSVATYTADRGGLIFYVAADYTPSSTQHVIDPRYLYKSCFVPVFEPRTHQELHESALVAV EIARRFNTPVVIQPSGVLCHSEGLVRMMPVTSREPAPVSPLRLQNSLPVFARANYDKVMAERMPGLLEMVEQSPLNVHIK GSGKRGVITHGINSMYMDEYRALFDKDIDILSLGFTNPLPMEKIRNFCESIEGEVFVIEDGYRFIQEACGAAGLKVTGKE EYSNVTEWTPASIAAFLGQQATAAPRPQAAPVPRPPMICAGCPYRLFGEVVARMKRKGEIEAVFGDIGCNTLLYFLGALD TGLAMGASESKRTGYVLSKPESVSKCISLLGDGTECHSGMDATRNAVFRNVAGVKVVLDNEWTAMTGGQPGPTSPVNLAG DPTRFDLVASLKAQGAEVALIDAYDMKSVRKGLRAALKAAEDGTFTTLVIRGTCIRKVPAADYGQKLIVDTEKCVQCGAC NICSGIQPDENGVPFWNNLCTGCVSKTPACLQMCPKGAIAVDTECSTGACAEKPVLPEAPEHIDVPVLTDAQRPARLSLG IRGVGGQGNLFFGKALAQMAFIAGYGEKNILKGETHGMAQMGGPVISTFACGDVHSTQFVPGTADALIVMEQSEVLRPGF LDMLRPEGTVLLAETVIVPQGFDPEKYPTRQAIDELLSGCNVVRIDVLKMALALGDERGRCANVVMLGALSRLSPFDAFP VEVWLQALKKVSPRPAVWTLNHAAFLQGRTLV
Sequences:
>Translated_832_residues MNPIEKLCRDEAGNSAVLQGNIAFAVGCVRAGIHAADGYPGTPSSEVIDKGLSQVQDMITVGWSVSEAVAAGVGHGHSLA GRDCVVTMKIPGLYQAGDIFTSVATYTADRGGLIFYVAADYTPSSTQHVIDPRYLYKSCFVPVFEPRTHQELHESALVAV EIARRFNTPVVIQPSGVLCHSEGLVRMMPVTSREPAPVSPLRLQNSLPVFARANYDKVMAERMPGLLEMVEQSPLNVHIK GSGKRGVITHGINSMYMDEYRALFDKDIDILSLGFTNPLPMEKIRNFCESIEGEVFVIEDGYRFIQEACGAAGLKVTGKE EYSNVTEWTPASIAAFLGQQATAAPRPQAAPVPRPPMICAGCPYRLFGEVVARMKRKGEIEAVFGDIGCNTLLYFLGALD TGLAMGASESKRTGYVLSKPESVSKCISLLGDGTECHSGMDATRNAVFRNVAGVKVVLDNEWTAMTGGQPGPTSPVNLAG DPTRFDLVASLKAQGAEVALIDAYDMKSVRKGLRAALKAAEDGTFTTLVIRGTCIRKVPAADYGQKLIVDTEKCVQCGAC NICSGIQPDENGVPFWNNLCTGCVSKTPACLQMCPKGAIAVDTECSTGACAEKPVLPEAPEHIDVPVLTDAQRPARLSLG IRGVGGQGNLFFGKALAQMAFIAGYGEKNILKGETHGMAQMGGPVISTFACGDVHSTQFVPGTADALIVMEQSEVLRPGF LDMLRPEGTVLLAETVIVPQGFDPEKYPTRQAIDELLSGCNVVRIDVLKMALALGDERGRCANVVMLGALSRLSPFDAFP VEVWLQALKKVSPRPAVWTLNHAAFLQGRTLV >Mature_832_residues MNPIEKLCRDEAGNSAVLQGNIAFAVGCVRAGIHAADGYPGTPSSEVIDKGLSQVQDMITVGWSVSEAVAAGVGHGHSLA GRDCVVTMKIPGLYQAGDIFTSVATYTADRGGLIFYVAADYTPSSTQHVIDPRYLYKSCFVPVFEPRTHQELHESALVAV EIARRFNTPVVIQPSGVLCHSEGLVRMMPVTSREPAPVSPLRLQNSLPVFARANYDKVMAERMPGLLEMVEQSPLNVHIK GSGKRGVITHGINSMYMDEYRALFDKDIDILSLGFTNPLPMEKIRNFCESIEGEVFVIEDGYRFIQEACGAAGLKVTGKE EYSNVTEWTPASIAAFLGQQATAAPRPQAAPVPRPPMICAGCPYRLFGEVVARMKRKGEIEAVFGDIGCNTLLYFLGALD TGLAMGASESKRTGYVLSKPESVSKCISLLGDGTECHSGMDATRNAVFRNVAGVKVVLDNEWTAMTGGQPGPTSPVNLAG DPTRFDLVASLKAQGAEVALIDAYDMKSVRKGLRAALKAAEDGTFTTLVIRGTCIRKVPAADYGQKLIVDTEKCVQCGAC NICSGIQPDENGVPFWNNLCTGCVSKTPACLQMCPKGAIAVDTECSTGACAEKPVLPEAPEHIDVPVLTDAQRPARLSLG IRGVGGQGNLFFGKALAQMAFIAGYGEKNILKGETHGMAQMGGPVISTFACGDVHSTQFVPGTADALIVMEQSEVLRPGF LDMLRPEGTVLLAETVIVPQGFDPEKYPTRQAIDELLSGCNVVRIDVLKMALALGDERGRCANVVMLGALSRLSPFDAFP VEVWLQALKKVSPRPAVWTLNHAAFLQGRTLV
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 89008; Mature: 89008
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01121 CASPASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIEKLCRDEAGNSAVLQGNIAFAVGCVRAGIHAADGYPGTPSSEVIDKGLSQVQDMIT CCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VGWSVSEAVAAGVGHGHSLAGRDCVVTMKIPGLYQAGDIFTSVATYTADRGGLIFYVAAD HCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC YTPSSTQHVIDPRYLYKSCFVPVFEPRTHQELHESALVAVEIARRFNTPVVIQPSGVLCH CCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEC SEGLVRMMPVTSREPAPVSPLRLQNSLPVFARANYDKVMAERMPGLLEMVEQSPLNVHIK CCCCEEEECCCCCCCCCCCCHHHCCCCCEEEECCHHHHHHHHCCHHHHHHHCCCCEEEEE GSGKRGVITHGINSMYMDEYRALFDKDIDILSLGFTNPLPMEKIRNFCESIEGEVFVIED CCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEC GYRFIQEACGAAGLKVTGKEEYSNVTEWTPASIAAFLGQQATAAPRPQAAPVPRPPMICA CHHHHHHHCCCCCEEEECHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC GCPYRLFGEVVARMKRKGEIEAVFGDIGCNTLLYFLGALDTGLAMGASESKRTGYVLSKP CCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC ESVSKCISLLGDGTECHSGMDATRNAVFRNVAGVKVVLDNEWTAMTGGQPGPTSPVNLAG HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCC DPTRFDLVASLKAQGAEVALIDAYDMKSVRKGLRAALKAAEDGTFTTLVIRGTCIRKVPA CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCC ADYGQKLIVDTEKCVQCGACNICSGIQPDENGVPFWNNLCTGCVSKTPACLQMCPKGAIA CCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCEE VDTECSTGACAEKPVLPEAPEHIDVPVLTDAQRPARLSLGIRGVGGQGNLFFGKALAQMA EECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHH FIAGYGEKNILKGETHGMAQMGGPVISTFACGDVHSTQFVPGTADALIVMEQSEVLRPGF HHHCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCH LDMLRPEGTVLLAETVIVPQGFDPEKYPTRQAIDELLSGCNVVRIDVLKMALALGDERGR HHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCC CANVVMLGALSRLSPFDAFPVEVWLQALKKVSPRPAVWTLNHAAFLQGRTLV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHCCCCCCC >Mature Secondary Structure MNPIEKLCRDEAGNSAVLQGNIAFAVGCVRAGIHAADGYPGTPSSEVIDKGLSQVQDMIT CCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VGWSVSEAVAAGVGHGHSLAGRDCVVTMKIPGLYQAGDIFTSVATYTADRGGLIFYVAAD HCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC YTPSSTQHVIDPRYLYKSCFVPVFEPRTHQELHESALVAVEIARRFNTPVVIQPSGVLCH CCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEC SEGLVRMMPVTSREPAPVSPLRLQNSLPVFARANYDKVMAERMPGLLEMVEQSPLNVHIK CCCCEEEECCCCCCCCCCCCHHHCCCCCEEEECCHHHHHHHHCCHHHHHHHCCCCEEEEE GSGKRGVITHGINSMYMDEYRALFDKDIDILSLGFTNPLPMEKIRNFCESIEGEVFVIED CCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEC GYRFIQEACGAAGLKVTGKEEYSNVTEWTPASIAAFLGQQATAAPRPQAAPVPRPPMICA CHHHHHHHCCCCCEEEECHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEC GCPYRLFGEVVARMKRKGEIEAVFGDIGCNTLLYFLGALDTGLAMGASESKRTGYVLSKP CCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECC ESVSKCISLLGDGTECHSGMDATRNAVFRNVAGVKVVLDNEWTAMTGGQPGPTSPVNLAG HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCEEEEECCCEEEECCCCCCCCCCCCCCC DPTRFDLVASLKAQGAEVALIDAYDMKSVRKGLRAALKAAEDGTFTTLVIRGTCIRKVPA CCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCC ADYGQKLIVDTEKCVQCGACNICSGIQPDENGVPFWNNLCTGCVSKTPACLQMCPKGAIA CCCCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCEE VDTECSTGACAEKPVLPEAPEHIDVPVLTDAQRPARLSLGIRGVGGQGNLFFGKALAQMA EECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHH FIAGYGEKNILKGETHGMAQMGGPVISTFACGDVHSTQFVPGTADALIVMEQSEVLRPGF HHHCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCH LDMLRPEGTVLLAETVIVPQGFDPEKYPTRQAIDELLSGCNVVRIDVLKMALALGDERGR HHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCC CANVVMLGALSRLSPFDAFPVEVWLQALKKVSPRPAVWTLNHAAFLQGRTLV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]