Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355499
Identifier: 78355499
GI number: 78355499
Start: 461877
End: 462665
Strand: Direct
Name: 78355499
Synonym: Dde_0452
Alternate gene names: NA
Gene position: 461877-462665 (Clockwise)
Preceding gene: 78355498
Following gene: 78355500
Centisome position: 12.38
GC content: 62.74
Gene sequence:
>789_bases ATGAACCGTATCATGATGAACCGCGCCGTTCCGACGGGCTGCGCGGCATTGGCCCTGTGCCTTGTTGTTATGTGGGGCGG CTGCCGCGCTCTGGCGGCCCCGGCGTCACCGGATGCACTGCTGGACACAGTGACATCGGCCATCGCCATAGAAAAAGCAG CGCATGAACGCGGCTCCGAATGGGAGCGCGAGCAGGCTCTGCTGCAGGAAGAACTGCGGCAGGCGCGTCTGGAAGAGGCG TGGTACGCGCTGCAGGTAAATACTTTTACCCGTTATGTGGATACGGCCCGCAGCCGTGTGGATGAGCTGACGAAAACCCG TGACGAGCTGGTGCGCATGGAGACAGAGCTTGAGGGGGCGCTGGTGGAAAGCGTGGAGGCGCTGGAAAACTTTGTGCGGC AGGATATGCCTTTTCTGCAGCAGGAGCGGGACCAGCGTCTGCGGTTTCTGCATGCAAGCATGAATGACTATGAACTGGGC GGAGCGGAAAAGCTGCGCAGGGTGCTGGAGGCGTTGCAGGCGGAACTCGGCTATGGCCGGGGTGTGGAACTGGCCGCCGC GCAGATAGACGTGCAGGGCGTTTCCCGCCGTGTGCAGTTGCTGAGGACGGGACGCGCAGGGCTGTATGCGCTGTCGCCGG ACGGTTCCGCCGCATGGCGCTGGACCCGTGCCGCGGGGTTTGTACCCGTGGAAGACGTGTATCTGGATTCGCTGCGTGAG GCTGCGGAAATGACGGAATCGGGCAGTGCATTCTCGCTGCCGGTGTTGCCTTTCGGGGAGGTGTGGTAA
Upstream 100 bases:
>100_bases ATACTGCAACAGTGTTTGCCGCACCGCGGCATGCTTATACACGCCGCCTGCTCGAGGCCGCTCCGGCGGGGCTGCAGAGT GCGGCGGGAGGAATAACCGG
Downstream 100 bases:
>100_bases TGCGGCGTTTGTTAACGGCAGTGATGCTGGTGGTGCTGGCCGCATGGCCTGTATACGGCGCCGAAAGGCAGGAAAAACCC GTACTCGGGCGCGTGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNRIMMNRAVPTGCAALALCLVVMWGGCRALAAPASPDALLDTVTSAIAIEKAAHERGSEWEREQALLQEELRQARLEEA WYALQVNTFTRYVDTARSRVDELTKTRDELVRMETELEGALVESVEALENFVRQDMPFLQQERDQRLRFLHASMNDYELG GAEKLRRVLEALQAELGYGRGVELAAAQIDVQGVSRRVQLLRTGRAGLYALSPDGSAAWRWTRAAGFVPVEDVYLDSLRE AAEMTESGSAFSLPVLPFGEVW
Sequences:
>Translated_262_residues MNRIMMNRAVPTGCAALALCLVVMWGGCRALAAPASPDALLDTVTSAIAIEKAAHERGSEWEREQALLQEELRQARLEEA WYALQVNTFTRYVDTARSRVDELTKTRDELVRMETELEGALVESVEALENFVRQDMPFLQQERDQRLRFLHASMNDYELG GAEKLRRVLEALQAELGYGRGVELAAAQIDVQGVSRRVQLLRTGRAGLYALSPDGSAAWRWTRAAGFVPVEDVYLDSLRE AAEMTESGSAFSLPVLPFGEVW >Mature_262_residues MNRIMMNRAVPTGCAALALCLVVMWGGCRALAAPASPDALLDTVTSAIAIEKAAHERGSEWEREQALLQEELRQARLEEA WYALQVNTFTRYVDTARSRVDELTKTRDELVRMETELEGALVESVEALENFVRQDMPFLQQERDQRLRFLHASMNDYELG GAEKLRRVLEALQAELGYGRGVELAAAQIDVQGVSRRVQLLRTGRAGLYALSPDGSAAWRWTRAAGFVPVEDVYLDSLRE AAEMTESGSAFSLPVLPFGEVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29248; Mature: 29248
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIMMNRAVPTGCAALALCLVVMWGGCRALAAPASPDALLDTVTSAIAIEKAAHERGSE CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH WEREQALLQEELRQARLEEAWYALQVNTFTRYVDTARSRVDELTKTRDELVRMETELEGA HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVESVEALENFVRQDMPFLQQERDQRLRFLHASMNDYELGGAEKLRRVLEALQAELGYGR HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC GVELAAAQIDVQGVSRRVQLLRTGRAGLYALSPDGSAAWRWTRAAGFVPVEDVYLDSLRE CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEHHHCCCCCHHHHHHHHHHH AAEMTESGSAFSLPVLPFGEVW HHHHHCCCCEEECCCCCCCCCC >Mature Secondary Structure MNRIMMNRAVPTGCAALALCLVVMWGGCRALAAPASPDALLDTVTSAIAIEKAAHERGSE CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH WEREQALLQEELRQARLEEAWYALQVNTFTRYVDTARSRVDELTKTRDELVRMETELEGA HHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVESVEALENFVRQDMPFLQQERDQRLRFLHASMNDYELGGAEKLRRVLEALQAELGYGR HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC GVELAAAQIDVQGVSRRVQLLRTGRAGLYALSPDGSAAWRWTRAAGFVPVEDVYLDSLRE CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEHHHCCCCCHHHHHHHHHHH AAEMTESGSAFSLPVLPFGEVW HHHHHCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA