The gene/protein map for NC_007519 is currently unavailable.
Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is nodI [H]

Identifier: 78355492

GI number: 78355492

Start: 450446

End: 451333

Strand: Direct

Name: nodI [H]

Synonym: Dde_0445

Alternate gene names: 78355492

Gene position: 450446-451333 (Clockwise)

Preceding gene: 78355491

Following gene: 78355493

Centisome position: 12.08

GC content: 57.66

Gene sequence:

>888_bases
ATGAGCGTACTCATCGAATGCCGTGACCTGAGCCATTCCTACGGCGAAAAAACGGTTCTGCACGACCTGTCGTTCACCGT
GCGGCAGGGAGGTGTGTTCGGGCTGCTGGGAAAAAACGGCGCGGGCAAAAGCACGACGATCAACATTCTGATGGGATTCC
TCAGACCCGGCAGCGGCAGCTGCCGGGTGCTGGGGGAGCCCAGCCACGCCCTGAGTCCCCATGCGCGCAGGCGTATCGGC
CTGCTGCACGAAGGATTCATCCAGTATGATTTCATGACCATAGCCGAACTGGAACGCTATTATGCCGCGTTTTACCCGTT
GTGGGACCGCAGCGTGTTTTTTGACCTGACAGACCGCCTGCAGGTGCCCTACAGCCGCCGCATATCGTGTCTGTCATGCG
GCCAGCGTTCACAGGTGGTGCTGGGGCTTATCATGGCCCAGCAGCCGCAGCTTATGATTCTGGATGACTACAGCATGGGG
CTGGATGTGGGCTACCGCAGGCTGTTCATCGATTTTCTGCGCGAATATGTGGCCAAACGGGGAACAACGGTGCTGCTTAC
CTCGCATGTGGTGCAGGAACTGGACAAAATCGTGGACAACATGATCGTGCTCCGCGAGGGAAGAGTGGCCGTTTCCGGTT
CCAAAAAAGAATTCATGGATTCTTTCCGGTGCTATTCTTTCGCCCGTTCGCCCGCCTCGGACGCGCTGCATGCCGACACG
GTGCTGGAAAACGTGGAACATATGGGTTCCGTAACCACCGTATATGCCTTTGCCGACGGCGAACCCGTCGCACGCCACCT
GAGGGACCGCGGAGTTGACCCGCAGAACATGACTCCGGTTCCCATGGATTTTGAAGACGCCTTTGTCGGACTGACCGGAA
AATACTGA

Upstream 100 bases:

>100_bases
AACCGTGAGGCCCGTGCCGCCTTTACGGAAGATTCCAGAGCCGTTCTGACAGTCACCGAATCCGGAACCGCCCCTCAGGC
ATCTGCGGAGTGACAGAGCA

Downstream 100 bases:

>100_bases
TTCCGGACAGGGCGCAGACACACAGCGGGCGGGGGTAAGCCCTGCCCGCCGGTCCGCTGCATCCTGTGTGCGGCTTCATG
GACTTTTTAAAAATGCCTAA

Product: ATPase

Products: NA

Alternate protein names: Nodulation ATP-binding protein I [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSVLIECRDLSHSYGEKTVLHDLSFTVRQGGVFGLLGKNGAGKSTTINILMGFLRPGSGSCRVLGEPSHALSPHARRRIG
LLHEGFIQYDFMTIAELERYYAAFYPLWDRSVFFDLTDRLQVPYSRRISCLSCGQRSQVVLGLIMAQQPQLMILDDYSMG
LDVGYRRLFIDFLREYVAKRGTTVLLTSHVVQELDKIVDNMIVLREGRVAVSGSKKEFMDSFRCYSFARSPASDALHADT
VLENVEHMGSVTTVYAFADGEPVARHLRDRGVDPQNMTPVPMDFEDAFVGLTGKY

Sequences:

>Translated_295_residues
MSVLIECRDLSHSYGEKTVLHDLSFTVRQGGVFGLLGKNGAGKSTTINILMGFLRPGSGSCRVLGEPSHALSPHARRRIG
LLHEGFIQYDFMTIAELERYYAAFYPLWDRSVFFDLTDRLQVPYSRRISCLSCGQRSQVVLGLIMAQQPQLMILDDYSMG
LDVGYRRLFIDFLREYVAKRGTTVLLTSHVVQELDKIVDNMIVLREGRVAVSGSKKEFMDSFRCYSFARSPASDALHADT
VLENVEHMGSVTTVYAFADGEPVARHLRDRGVDPQNMTPVPMDFEDAFVGLTGKY
>Mature_294_residues
SVLIECRDLSHSYGEKTVLHDLSFTVRQGGVFGLLGKNGAGKSTTINILMGFLRPGSGSCRVLGEPSHALSPHARRRIGL
LHEGFIQYDFMTIAELERYYAAFYPLWDRSVFFDLTDRLQVPYSRRISCLSCGQRSQVVLGLIMAQQPQLMILDDYSMGL
DVGYRRLFIDFLREYVAKRGTTVLLTSHVVQELDKIVDNMIVLREGRVAVSGSKKEFMDSFRCYSFARSPASDALHADTV
LENVEHMGSVTTVYAFADGEPVARHLRDRGVDPQNMTPVPMDFEDAFVGLTGKY

Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=204, Percent_Identity=27.9411764705882, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI47078218, Length=241, Percent_Identity=26.5560165975104, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI21536376, Length=206, Percent_Identity=27.1844660194175, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI45446740, Length=241, Percent_Identity=26.5560165975104, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI31657092, Length=251, Percent_Identity=25.8964143426295, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI153792144, Length=224, Percent_Identity=26.7857142857143, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI27262624, Length=204, Percent_Identity=27.9411764705882, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI27262626, Length=204, Percent_Identity=27.9411764705882, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI27477115, Length=224, Percent_Identity=27.2321428571429, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI27881501, Length=247, Percent_Identity=24.6963562753036, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI30795238, Length=247, Percent_Identity=24.6963562753036, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI150417984, Length=248, Percent_Identity=28.2258064516129, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI105990541, Length=205, Percent_Identity=26.3414634146341, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27436953, Length=221, Percent_Identity=25.7918552036199, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI9665248, Length=245, Percent_Identity=27.3469387755102, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI6005701, Length=216, Percent_Identity=26.8518518518519, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI48994943, Length=259, Percent_Identity=23.9382239382239, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786319, Length=233, Percent_Identity=26.6094420600858, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI87081782, Length=221, Percent_Identity=28.9592760180996, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=28.9473684210526, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786803, Length=222, Percent_Identity=27.027027027027, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1786345, Length=224, Percent_Identity=27.2321428571429, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI87081791, Length=228, Percent_Identity=25.8771929824561, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=26.5116279069767, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1786253, Length=209, Percent_Identity=27.7511961722488, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787759, Length=243, Percent_Identity=26.7489711934156, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790467, Length=221, Percent_Identity=25.3393665158371, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=23.9669421487603, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787370, Length=231, Percent_Identity=23.8095238095238, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788165, Length=230, Percent_Identity=24.3478260869565, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787712, Length=237, Percent_Identity=23.6286919831224, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI48994883, Length=260, Percent_Identity=23.4615384615385, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789593, Length=230, Percent_Identity=24.7826086956522, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787029, Length=228, Percent_Identity=24.5614035087719, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082268, Length=222, Percent_Identity=27.027027027027, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788472, Length=227, Percent_Identity=25.1101321585903, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788897, Length=208, Percent_Identity=28.3653846153846, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI48995001, Length=215, Percent_Identity=26.046511627907, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786563, Length=215, Percent_Identity=26.046511627907, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786698, Length=213, Percent_Identity=23.943661971831, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790190, Length=220, Percent_Identity=25, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1788450, Length=226, Percent_Identity=23.8938053097345, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786703, Length=205, Percent_Identity=25.8536585365854, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=24.8888888888889, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789586, Length=225, Percent_Identity=24, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1789672, Length=231, Percent_Identity=22.5108225108225, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788053, Length=194, Percent_Identity=27.319587628866, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=215, Percent_Identity=28.8372093023256, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115533608, Length=230, Percent_Identity=30.4347826086957, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25146777, Length=271, Percent_Identity=24.3542435424354, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71983523, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=213, Percent_Identity=26.2910798122066, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17510237, Length=223, Percent_Identity=30.0448430493274, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322177, Length=208, Percent_Identity=24.5192307692308, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=193, Percent_Identity=29.0155440414508, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=212, Percent_Identity=25.9433962264151, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24582014, Length=227, Percent_Identity=30.3964757709251, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24582012, Length=227, Percent_Identity=30.3964757709251, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24643674, Length=235, Percent_Identity=26.8085106382979, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24666092, Length=215, Percent_Identity=26.5116279069767, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24650853, Length=232, Percent_Identity=25.4310344827586, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24650855, Length=232, Percent_Identity=25.4310344827586, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI281362751, Length=232, Percent_Identity=25.4310344827586, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI221512771, Length=228, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI85725262, Length=188, Percent_Identity=30.8510638297872, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI28574150, Length=218, Percent_Identity=27.9816513761468, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007328, Length=217, Percent_Identity=28.110599078341, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281363262, Length=221, Percent_Identity=26.6968325791855, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24653245, Length=221, Percent_Identity=26.6968325791855, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24648314, Length=219, Percent_Identity=24.2009132420091, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221500365, Length=202, Percent_Identity=28.2178217821782, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007184, Length=202, Percent_Identity=28.2178217821782, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24641565, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI28573571, Length=227, Percent_Identity=23.7885462555066, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28573573, Length=227, Percent_Identity=23.7885462555066, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015851
- InterPro:   IPR005978
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33124; Mature: 32992

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSVLIECRDLSHSYGEKTVLHDLSFTVRQGGVFGLLGKNGAGKSTTINILMGFLRPGSGS
CCEEEEEECCCCCCCCHHHHHHHHHHEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCC
CRVLGEPSHALSPHARRRIGLLHEGFIQYDFMTIAELERYYAAFYPLWDRSVFFDLTDRL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHH
QVPYSRRISCLSCGQRSQVVLGLIMAQQPQLMILDDYSMGLDVGYRRLFIDFLREYVAKR
CCCHHHCCHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
GTTVLLTSHVVQELDKIVDNMIVLREGRVAVSGSKKEFMDSFRCYSFARSPASDALHADT
CCEEEEHHHHHHHHHHHHHHEEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHH
VLENVEHMGSVTTVYAFADGEPVARHLRDRGVDPQNMTPVPMDFEDAFVGLTGKY
HHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCC
>Mature Secondary Structure 
SVLIECRDLSHSYGEKTVLHDLSFTVRQGGVFGLLGKNGAGKSTTINILMGFLRPGSGS
CEEEEEECCCCCCCCHHHHHHHHHHEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCC
CRVLGEPSHALSPHARRRIGLLHEGFIQYDFMTIAELERYYAAFYPLWDRSVFFDLTDRL
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHH
QVPYSRRISCLSCGQRSQVVLGLIMAQQPQLMILDDYSMGLDVGYRRLFIDFLREYVAKR
CCCHHHCCHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
GTTVLLTSHVVQELDKIVDNMIVLREGRVAVSGSKKEFMDSFRCYSFARSPASDALHADT
CCEEEEHHHHHHHHHHHHHHEEEEECCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHH
VLENVEHMGSVTTVYAFADGEPVARHLRDRGVDPQNMTPVPMDFEDAFVGLTGKY
HHHHHHHCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]