| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355473
Identifier: 78355473
GI number: 78355473
Start: 424437
End: 425663
Strand: Direct
Name: 78355473
Synonym: Dde_0426
Alternate gene names: NA
Gene position: 424437-425663 (Clockwise)
Preceding gene: 78355472
Following gene: 78355474
Centisome position: 11.38
GC content: 60.72
Gene sequence:
>1227_bases ATGACACAGGAATACGGCGGGCTGAAGCTGTCAGTAATTATTCCCACGCATAACCGCATGGATATCGTGGTGAAAAATTT GCTGTGCCTTGCACGGCAGACGCTGCCGGCGGACAGCTTTGAGGTGCTGGTCTGTGACGATGCATCGACGGACGGCACAT GGGAAGCGCTTCAGTCGCTGTCCACCCCGTATGCGCTGCGTCTGTTCCGCCTGCCGCAATGCGGGGGGCCGGGCAGGGCC AGAAATCTGCTTATCCGCGAGGCGCGCGCAGAAGCGCTGGTTATCCTTAACGATGACGCGCTGCTGACACCTGCCGGACT GGCCATGCACGCGGCGGCGCTTGAAATGACCAGAGGTGAGCGCATAGCGGTGCTGGGTCGTTTTTCCTTTCCTGCCGATT ACCAGCGCACGCCTTTCGGCTGTCTGCTGGAACATACAGACCTGTCTTTCCGTTTTCCGCTGTTCACGCCGGGTAACTTT TACGGTGCCAACGCGTTTTATTCCTGCAATCTTGGCATTTATGCCGAAGCCGTGGCCGAAGCAGGGTATTTTGATGAAGG ATACGCCGGTGCCGGTGCCGAAGACATGGAACTGGGCGACAGGCTGGCGAAGCTGGGCAATATGGTGGTGTATCTGGATA AATGCGTTGCCGTGCACGAGCACAGACTTACCGTGCATGACTTCTGCCGTTCGCAGATAGGCAGAGGCGGCGGCGGAGTG GTGCGCTGCATGAATGATTTCAGTCAGGTGTTTCATTACGATGACATGGACACAGCCGCGCTGGAACGGCTGCGCAGGGG GCTGCACAGGGCCGAGGATGCGGTGCTGCGTCTGAAAGATGCCGTACACGCGCTGCACCGGCGTGCTGCCGTAGGCGAAG ATGTGGCGCCGCAGGACATTCCGTGGCGGGGCGTGCCGCTGCGGTACAGCGCGCATGACCAGTGGCGCATGCCGCCGCGC GCCGTGGAGCGCGAGGCGCAGCAGGCACTGGCGGATATGGTACCGCTGCTGAAAAGCAGAGAACTTTCCGCCGGCGATAT GGGCGCGCTGTATCAGGTGTGCTCTTTTCTTAAATGGCGGTACGACACTGTGGGCATTTCCCGTTCGCCGTGGATTGACG AATACGCGGCCCGCAAGGCCGAGCGTCAGGCTTCGAGACAGGCGGGACAGTCCTTGTGCGCAGCGGCGCAGAATCAGGAA TCCCCGGCCGGGCGGCAGGAGACATGA
Upstream 100 bases:
>100_bases GGCATTGCACAGGTGTACCGCTGGTATCTTGACCGGCTGGAAAGCGCGGCATGAGGCATGCCGCAGACGGGCTGCCGTGC AGGCCGCAACGGAGAATCCG
Downstream 100 bases:
>100_bases TGGTTAAAACGGTTCTGGTGACAGGGGTCAACGGCTTTATCGGCAGCCATGTGGCCGCGCTGCTGGGCAAAAGTCACCGT GTATACGGCACGGGCGGCGC
Product: glycosyl transferase, group 1/2 family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Family 2 Glycosyl Transferase; Group 2 Family Glycosyl Transferase; Glycosyl Transferase Group 1/2 Family Protein; Glycosyl Transferase Family 2 Protein; Glycosly Transferase; Cell Wall Biosynthesis Glycosyltransferase
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MTQEYGGLKLSVIIPTHNRMDIVVKNLLCLARQTLPADSFEVLVCDDASTDGTWEALQSLSTPYALRLFRLPQCGGPGRA RNLLIREARAEALVILNDDALLTPAGLAMHAAALEMTRGERIAVLGRFSFPADYQRTPFGCLLEHTDLSFRFPLFTPGNF YGANAFYSCNLGIYAEAVAEAGYFDEGYAGAGAEDMELGDRLAKLGNMVVYLDKCVAVHEHRLTVHDFCRSQIGRGGGGV VRCMNDFSQVFHYDDMDTAALERLRRGLHRAEDAVLRLKDAVHALHRRAAVGEDVAPQDIPWRGVPLRYSAHDQWRMPPR AVEREAQQALADMVPLLKSRELSAGDMGALYQVCSFLKWRYDTVGISRSPWIDEYAARKAERQASRQAGQSLCAAAQNQE SPAGRQET
Sequences:
>Translated_408_residues MTQEYGGLKLSVIIPTHNRMDIVVKNLLCLARQTLPADSFEVLVCDDASTDGTWEALQSLSTPYALRLFRLPQCGGPGRA RNLLIREARAEALVILNDDALLTPAGLAMHAAALEMTRGERIAVLGRFSFPADYQRTPFGCLLEHTDLSFRFPLFTPGNF YGANAFYSCNLGIYAEAVAEAGYFDEGYAGAGAEDMELGDRLAKLGNMVVYLDKCVAVHEHRLTVHDFCRSQIGRGGGGV VRCMNDFSQVFHYDDMDTAALERLRRGLHRAEDAVLRLKDAVHALHRRAAVGEDVAPQDIPWRGVPLRYSAHDQWRMPPR AVEREAQQALADMVPLLKSRELSAGDMGALYQVCSFLKWRYDTVGISRSPWIDEYAARKAERQASRQAGQSLCAAAQNQE SPAGRQET >Mature_407_residues TQEYGGLKLSVIIPTHNRMDIVVKNLLCLARQTLPADSFEVLVCDDASTDGTWEALQSLSTPYALRLFRLPQCGGPGRAR NLLIREARAEALVILNDDALLTPAGLAMHAAALEMTRGERIAVLGRFSFPADYQRTPFGCLLEHTDLSFRFPLFTPGNFY GANAFYSCNLGIYAEAVAEAGYFDEGYAGAGAEDMELGDRLAKLGNMVVYLDKCVAVHEHRLTVHDFCRSQIGRGGGGVV RCMNDFSQVFHYDDMDTAALERLRRGLHRAEDAVLRLKDAVHALHRRAAVGEDVAPQDIPWRGVPLRYSAHDQWRMPPRA VEREAQQALADMVPLLKSRELSAGDMGALYQVCSFLKWRYDTVGISRSPWIDEYAARKAERQASRQAGQSLCAAAQNQES PAGRQET
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45210; Mature: 45079
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEYGGLKLSVIIPTHNRMDIVVKNLLCLARQTLPADSFEVLVCDDASTDGTWEALQSL CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH STPYALRLFRLPQCGGPGRARNLLIREARAEALVILNDDALLTPAGLAMHAAALEMTRGE CCCHHHHEEECCCCCCCCHHHHHHHEECCCCEEEEECCCCEECCCHHHHHHHHHHHCCCC RIAVLGRFSFPADYQRTPFGCLLEHTDLSFRFPLFTPGNFYGANAFYSCNLGIYAEAVAE EEEEEEECCCCCCCCCCCHHHEEEECCCEEEECCCCCCCCCCCCCEEECCCCHHHHHHHH AGYFDEGYAGAGAEDMELGDRLAKLGNMVVYLDKCVAVHEHRLTVHDFCRSQIGRGGGGV CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCHH VRCMNDFSQVFHYDDMDTAALERLRRGLHRAEDAVLRLKDAVHALHRRAAVGEDVAPQDI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PWRGVPLRYSAHDQWRMPPRAVEREAQQALADMVPLLKSRELSAGDMGALYQVCSFLKWR CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YDTVGISRSPWIDEYAARKAERQASRQAGQSLCAAAQNQESPAGRQET HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TQEYGGLKLSVIIPTHNRMDIVVKNLLCLARQTLPADSFEVLVCDDASTDGTWEALQSL CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH STPYALRLFRLPQCGGPGRARNLLIREARAEALVILNDDALLTPAGLAMHAAALEMTRGE CCCHHHHEEECCCCCCCCHHHHHHHEECCCCEEEEECCCCEECCCHHHHHHHHHHHCCCC RIAVLGRFSFPADYQRTPFGCLLEHTDLSFRFPLFTPGNFYGANAFYSCNLGIYAEAVAE EEEEEEECCCCCCCCCCCHHHEEEECCCEEEECCCCCCCCCCCCCEEECCCCHHHHHHHH AGYFDEGYAGAGAEDMELGDRLAKLGNMVVYLDKCVAVHEHRLTVHDFCRSQIGRGGGGV CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCHH VRCMNDFSQVFHYDDMDTAALERLRRGLHRAEDAVLRLKDAVHALHRRAAVGEDVAPQDI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PWRGVPLRYSAHDQWRMPPRAVEREAQQALADMVPLLKSRELSAGDMGALYQVCSFLKWR CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YDTVGISRSPWIDEYAARKAERQASRQAGQSLCAAAQNQESPAGRQET HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA