Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is epsM [H]
Identifier: 78355406
GI number: 78355406
Start: 347992
End: 348633
Strand: Direct
Name: epsM [H]
Synonym: Dde_0359
Alternate gene names: 78355406
Gene position: 347992-348633 (Clockwise)
Preceding gene: 78355404
Following gene: 78355412
Centisome position: 9.33
GC content: 64.8
Gene sequence:
>642_bases ATGGATTCACTTGTTCTTTTTGGTGCGGGCGGCCACGGCAAAGTGCTGCTTGATGCGGCGCGTGCCGGCGGCGGGCGTGT GCTTTTCTGCGCGGACGATGATGCGGCACGTGCCGGAACGGTTTTCTGCGGTCTGGAAGTGAAACCGGCCGCGCAGCTGG GCAGTTTTTGCAATTGCGGCAACGTCGCACTGCTGAACGGCATCGGGTATGTGGGCGGCCGCAATGTGCGGGCACATGTC CATGCCCGTCTGACAGCCGGGGGCTGGCGTTTTGCGACGGTGTGTCATCCGGCGGCCGTCATAGCGCAGGATGCCGTGCT GGCGGATGGCGTGCAGGTGCTTGCAGGCGCTGTGGTGGCGCCGTCGGTCAGAGTGGGGGTGAATTCCATCATTAATCACC GTGCGGTTGTCGACCATGATTGCGTGGTGGGCGAACATTGCCATGTGGCGCCCGGAGTCACGCTGTGCGGCGGGGTGCGG CTGGGCAGCGGTGTTTTTGTGGGAGCCGGAGCCACCGTTGTTCCGGGGGTCAGCATAGGCGACGGTGCGGTCATAGGCGC GGGGGCCACTGTTCTGCGCCATGTGTCCGCAGGCAGTGTGGTGGCGGGCACTCCGGCCATACCCCTTGCGGGCAAAGTGT GA
Upstream 100 bases:
>100_bases TGAGCGCCGGAGGGAAGCACGGTCTTGTTCCGGCGACTGATACACCATTACGGGCGCTGCGTCCATTCACTGCATTTTCT GTACTGGCGGTTGGATTATC
Downstream 100 bases:
>100_bases TATTTTTTTATATTTCATGATCATAAAAAAGCGGCCCCGGCGTCATGCCGGGGCCGTTTGTTTTATCTGCGGGGCAGCGA ACGTCACGCAGGTTCCGGCC
Product: hexapeptide transferase family protein
Products: CoA; acetylmaltose [C]
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDSLVLFGAGGHGKVLLDAARAGGGRVLFCADDDAARAGTVFCGLEVKPAAQLGSFCNCGNVALLNGIGYVGGRNVRAHV HARLTAGGWRFATVCHPAAVIAQDAVLADGVQVLAGAVVAPSVRVGVNSIINHRAVVDHDCVVGEHCHVAPGVTLCGGVR LGSGVFVGAGATVVPGVSIGDGAVIGAGATVLRHVSAGSVVAGTPAIPLAGKV
Sequences:
>Translated_213_residues MDSLVLFGAGGHGKVLLDAARAGGGRVLFCADDDAARAGTVFCGLEVKPAAQLGSFCNCGNVALLNGIGYVGGRNVRAHV HARLTAGGWRFATVCHPAAVIAQDAVLADGVQVLAGAVVAPSVRVGVNSIINHRAVVDHDCVVGEHCHVAPGVTLCGGVR LGSGVFVGAGATVVPGVSIGDGAVIGAGATVLRHVSAGSVVAGTPAIPLAGKV >Mature_213_residues MDSLVLFGAGGHGKVLLDAARAGGGRVLFCADDDAARAGTVFCGLEVKPAAQLGSFCNCGNVALLNGIGYVGGRNVRAHV HARLTAGGWRFATVCHPAAVIAQDAVLADGVQVLAGAVVAPSVRVGVNSIINHRAVVDHDCVVGEHCHVAPGVTLCGGVR LGSGVFVGAGATVVPGVSIGDGAVIGAGATVLRHVSAGSVVAGTPAIPLAGKV
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR013817 - InterPro: IPR020019 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.79 [C]
Molecular weight: Translated: 20847; Mature: 20847
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLVLFGAGGHGKVLLDAARAGGGRVLFCADDDAARAGTVFCGLEVKPAAQLGSFCNCG CCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHCCCCCCC NVALLNGIGYVGGRNVRAHVHARLTAGGWRFATVCHPAAVIAQDAVLADGVQVLAGAVVA CEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHC PSVRVGVNSIINHRAVVDHDCVVGEHCHVAPGVTLCGGVRLGSGVFVGAGATVVPGVSIG CCHHCCHHHHHCCCEEECCCCEECCCCCCCCCCEEECCEEECCCEEEECCCEEECCCCCC DGAVIGAGATVLRHVSAGSVVAGTPAIPLAGKV CCEEEECCHHHHHCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MDSLVLFGAGGHGKVLLDAARAGGGRVLFCADDDAARAGTVFCGLEVKPAAQLGSFCNCG CCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCHHHHCCCCCCC NVALLNGIGYVGGRNVRAHVHARLTAGGWRFATVCHPAAVIAQDAVLADGVQVLAGAVVA CEEEEECCCCCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHC PSVRVGVNSIINHRAVVDHDCVVGEHCHVAPGVTLCGGVRLGSGVFVGAGATVVPGVSIG CCHHCCHHHHHCCCEEECCCCEECCCCCCCCCCEEECCEEECCCEEEECCCEEECCCCCC DGAVIGAGATVLRHVSAGSVVAGTPAIPLAGKV CCEEEECCHHHHHCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: 0.20 {glucose} 0.11 {maltose}
Km value (mM): 0.018 {acetyl-CoA}} 62 {glucose}} 40 {triethanolamine}} 90 {maltose}} [C]
Substrates: Acetyl-CoA; maltose [C]
Specific reaction: Acetyl-CoA + maltose = CoA + acetylmaltose [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]