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The map label for this gene is yciA [C]

Identifier: 78355383

GI number: 78355383

Start: 325803

End: 326333

Strand: Direct

Name: yciA [C]

Synonym: Dde_0336

Alternate gene names: 78355383

Gene position: 325803-326333 (Clockwise)

Preceding gene: 78355382

Following gene: 78355384

Centisome position: 8.73

GC content: 60.08

Gene sequence:

>531_bases
ATGAATGATCGTAAGGTGAGCGACAGCGATACCATTATGACGCACAGAGGCTTGCCGCAGGATGCCAACCCCGCCGGCAA
CATCCACGGCGGCACCATTCTGAAGCATATCGATCTTGCCGGTGCCGTGGCGGCCATGCGTCACGCCAGAGGCCGCACGG
TGGTCACCGCGTCCATTGACAGGATGGAATTCAAGGCTGCCGTACATGTGGGAGAGCTTATGGTGCTGAAGGCCAGCGTG
AACATGGTCAGTAATACGTCCATGGAAGTGGGGGTACGTGTGGAGGCTGAAAACCTGCTCACGGGCGAGGTGCGGCATGC
TGCTTCGGCATACCTGACATTTGTGGCCATGGATGAAAACCGCAGACCGACTGCAGTGCCGGGCCTGATACTGGAAACGC
CCGAGCAGCACCGCCGTAACCGCGAAGCCCTGATGCGGCGCGAGGTGCGGCGCGAAGAGCGGCGGCGCGAAAAACTGTCG
CAGGAAGGGCAGACTCTGGCCCGTGATGAAGGCGTGAAAGAACTGTACTGA

Upstream 100 bases:

>100_bases
TGCTGTGTACGGGACGCGGCTGCGGCGGTGCATACCCTGTTGTCTGCGGGCGCGTGCACCGTATGCAGGCCGCGCTGCCG
GCAGGATACCGGAGGTAATT

Downstream 100 bases:

>100_bases
TGCACCGCGGACGGGCAGTGATTTTTTTGTGGAGTGCTGTGTGTGCATGCCGCGCTGCGCCTGTTGCGGAACATTTTTTG
CTTTTTTTATCCTGCCGTAC

Product: thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNDRKVSDSDTIMTHRGLPQDANPAGNIHGGTILKHIDLAGAVAAMRHARGRTVVTASIDRMEFKAAVHVGELMVLKASV
NMVSNTSMEVGVRVEAENLLTGEVRHAASAYLTFVAMDENRRPTAVPGLILETPEQHRRNREALMRREVRREERRREKLS
QEGQTLARDEGVKELY

Sequences:

>Translated_176_residues
MNDRKVSDSDTIMTHRGLPQDANPAGNIHGGTILKHIDLAGAVAAMRHARGRTVVTASIDRMEFKAAVHVGELMVLKASV
NMVSNTSMEVGVRVEAENLLTGEVRHAASAYLTFVAMDENRRPTAVPGLILETPEQHRRNREALMRREVRREERRREKLS
QEGQTLARDEGVKELY
>Mature_176_residues
MNDRKVSDSDTIMTHRGLPQDANPAGNIHGGTILKHIDLAGAVAAMRHARGRTVVTASIDRMEFKAAVHVGELMVLKASV
NMVSNTSMEVGVRVEAENLLTGEVRHAASAYLTFVAMDENRRPTAVPGLILETPEQHRRNREALMRREVRREERRREKLS
QEGQTLARDEGVKELY

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI18640736, Length=141, Percent_Identity=32.6241134751773, Blast_Score=81, Evalue=4e-16,
Organism=Homo sapiens, GI22165400, Length=138, Percent_Identity=36.231884057971, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI22165355, Length=138, Percent_Identity=36.231884057971, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI32528284, Length=140, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI32528286, Length=140, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI32528282, Length=140, Percent_Identity=32.1428571428571, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI75709208, Length=140, Percent_Identity=32.1428571428571, Blast_Score=78, Evalue=3e-15,
Organism=Escherichia coli, GI1787506, Length=125, Percent_Identity=29.6, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 19648; Mature: 19648

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRKVSDSDTIMTHRGLPQDANPAGNIHGGTILKHIDLAGAVAAMRHARGRTVVTASID
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
RMEFKAAVHVGELMVLKASVNMVSNTSMEVGVRVEAENLLTGEVRHAASAYLTFVAMDEN
HHHHHHHHHHHHEEEEEEHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHEEEEEEECCC
RRPTAVPGLILETPEQHRRNREALMRREVRREERRREKLSQEGQTLARDEGVKELY
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHCC
>Mature Secondary Structure
MNDRKVSDSDTIMTHRGLPQDANPAGNIHGGTILKHIDLAGAVAAMRHARGRTVVTASID
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
RMEFKAAVHVGELMVLKASVNMVSNTSMEVGVRVEAENLLTGEVRHAASAYLTFVAMDEN
HHHHHHHHHHHHEEEEEEHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHEEEEEEECCC
RRPTAVPGLILETPEQHRRNREALMRREVRREERRREKLSQEGQTLARDEGVKELY
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]