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The map label for this gene is ykoG [H]

Identifier: 78355371

GI number: 78355371

Start: 312945

End: 313328

Strand: Direct

Name: ykoG [H]

Synonym: Dde_0324

Alternate gene names: 78355371

Gene position: 312945-313328 (Clockwise)

Preceding gene: 78355370

Following gene: 78355372

Centisome position: 8.39

GC content: 57.29

Gene sequence:

>384_bases
ATGACTATTCACGTTTTGCTGGTGGATGACGAGGTCGACTTTGTACAGACCTTGGCCGAACGTCTGCGAATCCGCGGCAT
GACCGTGGACACGGCTCATGACGGGGAGCACGCATTGCAGATTGTGAATGACTGCGGGGCATCGGTGATGGTTCTTGATC
TCAGGCTTCCCGGCATGGACGGGCTGGAAGTGCTGCGTCATGTCCGCAAACAATGTCCGCGGATGCAGGTTATTATGCTG
ACAGGGCACGGAGGCCGTAAGGACGAGGATTCTGCCAGGGTTATTGGTGCTTACGAGTATCTTAATAAGCCGGTGGACAT
CAGTCAGCTCTCTGAGGTCATTGCGGCGGCTGCCGAGGAAGCGGCGCTGCAGGGCGCGGAGTAG

Upstream 100 bases:

>100_bases
CAAAGCTTGCCAGACGCCGCAGACAATGCACAGGCGTGCAGCAGTCCGGCAAAGGCAGCCCGCAGGGGCGCGGTTAGGGA
AAACAAGGGTGGAGACTGAC

Downstream 100 bases:

>100_bases
GCCCCTTGCAGGGCCGCCTAGCAATGGAGGATGTATGGAAACACCCTTAGTACGGGATGTTATGATCCCTGTTTCCGAGT
ATGTTGTCATCGAAGAAGGC

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTIHVLLVDDEVDFVQTLAERLRIRGMTVDTAHDGEHALQIVNDCGASVMVLDLRLPGMDGLEVLRHVRKQCPRMQVIML
TGHGGRKDEDSARVIGAYEYLNKPVDISQLSEVIAAAAEEAALQGAE

Sequences:

>Translated_127_residues
MTIHVLLVDDEVDFVQTLAERLRIRGMTVDTAHDGEHALQIVNDCGASVMVLDLRLPGMDGLEVLRHVRKQCPRMQVIML
TGHGGRKDEDSARVIGAYEYLNKPVDISQLSEVIAAAAEEAALQGAE
>Mature_126_residues
TIHVLLVDDEVDFVQTLAERLRIRGMTVDTAHDGEHALQIVNDCGASVMVLDLRLPGMDGLEVLRHVRKQCPRMQVIMLT
GHGGRKDEDSARVIGAYEYLNKPVDISQLSEVIAAAAEEAALQGAE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788905, Length=119, Percent_Identity=36.9747899159664, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=105, Percent_Identity=34.2857142857143, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1788550, Length=113, Percent_Identity=30.0884955752212, Blast_Score=68, Evalue=1e-13,
Organism=Escherichia coli, GI1789809, Length=127, Percent_Identity=33.0708661417323, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 13919; Mature: 13788

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHVLLVDDEVDFVQTLAERLRIRGMTVDTAHDGEHALQIVNDCGASVMVLDLRLPGMD
CEEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCC
GLEVLRHVRKQCPRMQVIMLTGHGGRKDEDSARVIGAYEYLNKPVDISQLSEVIAAAAEE
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHEEEHHHHHCCCCCHHHHHHHHHHHHHH
AALQGAE
HHCCCCC
>Mature Secondary Structure 
TIHVLLVDDEVDFVQTLAERLRIRGMTVDTAHDGEHALQIVNDCGASVMVLDLRLPGMD
EEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCC
GLEVLRHVRKQCPRMQVIMLTGHGGRKDEDSARVIGAYEYLNKPVDISQLSEVIAAAAEE
HHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHEEEHHHHHCCCCCHHHHHHHHHHHHHH
AALQGAE
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]