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The map label for this gene is ybjT [H]

Identifier: 78355283

GI number: 78355283

Start: 220779

End: 222395

Strand: Direct

Name: ybjT [H]

Synonym: Dde_0236

Alternate gene names: 78355283

Gene position: 220779-222395 (Clockwise)

Preceding gene: 78355273

Following gene: 78355285

Centisome position: 5.92

GC content: 65.43

Gene sequence:

>1617_bases
ATGGATAACAGTGAGACAGCATCTGCAGGGCGTGCGGCCGCACATGGTCCGGGAACAGTGCTTGTGCTGGGGGCGTCGGG
CTATGTGGGGGGGCGCCTTGTTCCCCTGCTGCTGGAAAAAGGATGGCATGTGCGTGCCGCCGGGCGTTCCGCGGAAAAGC
TGCGCTGCCGCCCGTGGGCGGCACATCCGGCGTGCAGCATAACCGAGGCTGATGCACGGGATGCGGGTTCGCTGCTGCAG
GCCATGCGCGGCTGCGAGGCAGCGTACTATCTGGTGCATTCCATGTCGCCGGGGGGCAGGGGGTTCGAGGGGGCGGACAG
GCAGGCCGCCTGTGCCATGGTGGAGGCCGCCAACGCCAGTGCCGCGGAATCAACCGCGGCGGACGGCGGGGCCGGTTTGC
GGCGTATAATCTATCTGAGCGGGCTGGTGCCGGATGATCCGCAACTCAGTGCGCATCTGCGTTCGCGGGCGGAAGTTGCC
CGTATTCTCGCGCTGGGCAGGGTGCCTGTGACAACTCTGCGCGCCGCCCAGATTCTGGGTTCCGGCAGTGCCTCCTTTGA
GATTCTGCGCTATCTTGCCGACAGACTGCCCGTGATGATCACTCCCCGCTGGGTGCGCACGCAGACTCAGCCCATAGCTG
TGTCCGACGTGCTTGCCTATCTGGCAGGGTGCCTTGAGCATCCCGAAACCACGGGGCGTACATATGATATCGGCGGGCCG
GACATCCTCAGCTATACGGAATTATTCGCTCTGTATGCCGATGTGGCGGGGCTGCGGCGGCGGGTGATTATTCCCGTGCC
GTTTCTTTCACCCGCACTGAGCGCACACTGGCTCAATGTGGTCACGCCGGTTCCGCGCGCACTGGCTGCGCCGCTGGTCG
AGGGGTTGCGCAACAGGGTGGTCTGCGCCGAAAATTCCATCCGTGATGTCATTCCGCTGCAGCTTACTGACTGCCGTACG
GCCATAAGTATGGCTCTGGACAAGGTACGCCAGCATGCCGTGGCCACCTGCTGGACCGACGCCGGAGCCATCACCCGCCC
CGAATGGCTGGCGGAAGGCGATGCCCCCTATGCCGGAGGCACCGTGCTGCAGGACGGTTATTCCATGCGTGTTGCCGCTT
CGCCGGAAGCCGTGTGGGAGCCGGTGCGCCGTATAGGGGGCGAAACCGGCTGGTATTACGATGACTGGCTGTGGCGGCTG
CGCGGGCTGCTGGACAAGCTGGCGGGCGGTGTGGGCGCGCGCAGGGGCCGCCGGCATCCCGTGGATCTGCGTGTGGGGGA
TGCGCTGGATTTCTGGCGGGTTCTTTCCGTACGGCATGCGGAGCATCTGCTGCTGCTGGCCGAAATGAAAGTCCCCGGCG
AAGCCATGCTTGAAATCCGTGTGGTGCCCGTTGGCGCGCAGACAGAGCTGCGGATGCGTGCATGGTTTTTACCGCGCGGT
CTGTGGGGACTGGCTTACTGGTATCTGGTGTACCCGCTGCACGGGCTGGTGTTCAAAGGAATGCTGCGTGCGCTGGGTCG
CAAGGCCGGAGCCGACGGAAGCGCGCCGGTGCGTAAACTGCCGCCGGAAGACCCCGCGGCGTGCAGGCTGCCGACGGACG
GCGGAAGCGCCCGCTGA

Upstream 100 bases:

>100_bases
CCGCGATAATGCATCATGCCCGCTGTCGGCGGCGTGCGATGTGGTGTATGCTGGGGCAGCGTGATACGGCCGGAACACAT
AACAGCAACAAGGAGCCGTC

Downstream 100 bases:

>100_bases
AAAAGTACGGCAGCGGCCGGTCCGTATGCACACGGACCGGCCGCTGTGTTGTTTTAGTAAGGAAGAATCTTGCGGCCGCG
TACTTCGTGCAGCACTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MDNSETASAGRAAAHGPGTVLVLGASGYVGGRLVPLLLEKGWHVRAAGRSAEKLRCRPWAAHPACSITEADARDAGSLLQ
AMRGCEAAYYLVHSMSPGGRGFEGADRQAACAMVEAANASAAESTAADGGAGLRRIIYLSGLVPDDPQLSAHLRSRAEVA
RILALGRVPVTTLRAAQILGSGSASFEILRYLADRLPVMITPRWVRTQTQPIAVSDVLAYLAGCLEHPETTGRTYDIGGP
DILSYTELFALYADVAGLRRRVIIPVPFLSPALSAHWLNVVTPVPRALAAPLVEGLRNRVVCAENSIRDVIPLQLTDCRT
AISMALDKVRQHAVATCWTDAGAITRPEWLAEGDAPYAGGTVLQDGYSMRVAASPEAVWEPVRRIGGETGWYYDDWLWRL
RGLLDKLAGGVGARRGRRHPVDLRVGDALDFWRVLSVRHAEHLLLLAEMKVPGEAMLEIRVVPVGAQTELRMRAWFLPRG
LWGLAYWYLVYPLHGLVFKGMLRALGRKAGADGSAPVRKLPPEDPAACRLPTDGGSAR

Sequences:

>Translated_538_residues
MDNSETASAGRAAAHGPGTVLVLGASGYVGGRLVPLLLEKGWHVRAAGRSAEKLRCRPWAAHPACSITEADARDAGSLLQ
AMRGCEAAYYLVHSMSPGGRGFEGADRQAACAMVEAANASAAESTAADGGAGLRRIIYLSGLVPDDPQLSAHLRSRAEVA
RILALGRVPVTTLRAAQILGSGSASFEILRYLADRLPVMITPRWVRTQTQPIAVSDVLAYLAGCLEHPETTGRTYDIGGP
DILSYTELFALYADVAGLRRRVIIPVPFLSPALSAHWLNVVTPVPRALAAPLVEGLRNRVVCAENSIRDVIPLQLTDCRT
AISMALDKVRQHAVATCWTDAGAITRPEWLAEGDAPYAGGTVLQDGYSMRVAASPEAVWEPVRRIGGETGWYYDDWLWRL
RGLLDKLAGGVGARRGRRHPVDLRVGDALDFWRVLSVRHAEHLLLLAEMKVPGEAMLEIRVVPVGAQTELRMRAWFLPRG
LWGLAYWYLVYPLHGLVFKGMLRALGRKAGADGSAPVRKLPPEDPAACRLPTDGGSAR
>Mature_538_residues
MDNSETASAGRAAAHGPGTVLVLGASGYVGGRLVPLLLEKGWHVRAAGRSAEKLRCRPWAAHPACSITEADARDAGSLLQ
AMRGCEAAYYLVHSMSPGGRGFEGADRQAACAMVEAANASAAESTAADGGAGLRRIIYLSGLVPDDPQLSAHLRSRAEVA
RILALGRVPVTTLRAAQILGSGSASFEILRYLADRLPVMITPRWVRTQTQPIAVSDVLAYLAGCLEHPETTGRTYDIGGP
DILSYTELFALYADVAGLRRRVIIPVPFLSPALSAHWLNVVTPVPRALAAPLVEGLRNRVVCAENSIRDVIPLQLTDCRT
AISMALDKVRQHAVATCWTDAGAITRPEWLAEGDAPYAGGTVLQDGYSMRVAASPEAVWEPVRRIGGETGWYYDDWLWRL
RGLLDKLAGGVGARRGRRHPVDLRVGDALDFWRVLSVRHAEHLLLLAEMKVPGEAMLEIRVVPVGAQTELRMRAWFLPRG
LWGLAYWYLVYPLHGLVFKGMLRALGRKAGADGSAPVRKLPPEDPAACRLPTDGGSAR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=494, Percent_Identity=34.6153846153846, Blast_Score=274, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 57991; Mature: 57991

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSETASAGRAAAHGPGTVLVLGASGYVGGRLVPLLLEKGWHVRAAGRSAEKLRCRPWA
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCCHHCCCCCCC
AHPACSITEADARDAGSLLQAMRGCEAAYYLVHSMSPGGRGFEGADRQAACAMVEAANAS
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCC
AAESTAADGGAGLRRIIYLSGLVPDDPQLSAHLRSRAEVARILALGRVPVTTLRAAQILG
CHHHCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
SGSASFEILRYLADRLPVMITPRWVRTQTQPIAVSDVLAYLAGCLEHPETTGRTYDIGGP
CCCHHHHHHHHHHHCCCEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCC
DILSYTELFALYADVAGLRRRVIIPVPFLSPALSAHWLNVVTPVPRALAAPLVEGLRNRV
CHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCE
VCAENSIRDVIPLQLTDCRTAISMALDKVRQHAVATCWTDAGAITRPEWLAEGDAPYAGG
EECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCC
TVLQDGYSMRVAASPEAVWEPVRRIGGETGWYYDDWLWRLRGLLDKLAGGVGARRGRRHP
CEEECCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VDLRVGDALDFWRVLSVRHAEHLLLLAEMKVPGEAMLEIRVVPVGAQTELRMRAWFLPRG
CEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHCCCH
LWGLAYWYLVYPLHGLVFKGMLRALGRKAGADGSAPVRKLPPEDPAACRLPTDGGSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MDNSETASAGRAAAHGPGTVLVLGASGYVGGRLVPLLLEKGWHVRAAGRSAEKLRCRPWA
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCEEEECCCCCHHCCCCCCC
AHPACSITEADARDAGSLLQAMRGCEAAYYLVHSMSPGGRGFEGADRQAACAMVEAANAS
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCC
AAESTAADGGAGLRRIIYLSGLVPDDPQLSAHLRSRAEVARILALGRVPVTTLRAAQILG
CHHHCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC
SGSASFEILRYLADRLPVMITPRWVRTQTQPIAVSDVLAYLAGCLEHPETTGRTYDIGGP
CCCHHHHHHHHHHHCCCEEECCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCC
DILSYTELFALYADVAGLRRRVIIPVPFLSPALSAHWLNVVTPVPRALAAPLVEGLRNRV
CHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCE
VCAENSIRDVIPLQLTDCRTAISMALDKVRQHAVATCWTDAGAITRPEWLAEGDAPYAGG
EECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCC
TVLQDGYSMRVAASPEAVWEPVRRIGGETGWYYDDWLWRLRGLLDKLAGGVGARRGRRHP
CEEECCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VDLRVGDALDFWRVLSVRHAEHLLLLAEMKVPGEAMLEIRVVPVGAQTELRMRAWFLPRG
CEEEECCHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEEEECCCCHHHHHHHHCCCH
LWGLAYWYLVYPLHGLVFKGMLRALGRKAGADGSAPVRKLPPEDPAACRLPTDGGSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]