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The map label for this gene is dcrA [H]

Identifier: 78355265

GI number: 78355265

Start: 201106

End: 203043

Strand: Direct

Name: dcrA [H]

Synonym: Dde_0218

Alternate gene names: 78355265

Gene position: 201106-203043 (Clockwise)

Preceding gene: 78355264

Following gene: 78355266

Centisome position: 5.39

GC content: 61.56

Gene sequence:

>1938_bases
ATGGGAATACGACACAAGTTGTTATTGCTGCTGGGTATTTGTGTTGCGGGATTCGGTGCGCAGTTTGCCGCGGACCGTAC
AGGCAACATCCTGACGCAGGATGTGCTGGCGCTGGAAAGGCTGGCTGTGGACGCCAAAGAACAGGTGCTGCAGGTCCGCC
GGCAGGAGAAGAACTACCTGCTGCGCACGGACAGCGAGTCGCTGGACAGTGCGCGGCAGAGTCTGGAAGCCATCAGAGAC
AGCCTGCGGCGCATAGCTGCGCAGCAACCGGAGGCCGCCCGGCAGACAGAGCGCATTCTTGACCGGCTGGGTGTTTATGC
CGGAGCTTTTGAAGCCGCCGTACAGGCCCACAGTGCTCTGGGTAATCTGGAAACGGGTATCGAGCATGATTTCATCATGG
CGGCCAGAGAGCTTGAGTCGGCCGTGGATGCTCTGGGTGACAAAGATGTGCTTGTCGTGCTGCTGCAGCTGCGGCGGCAG
GAAAAGAATTTTGTGATGCGCGGCGGACAGTTGTACGTTGACAGGGTGGATGCCCTGCTGAAAGGACTGGAGCGCGGTCT
GGCCGGAAACAGCGAACTGCTGGACAAGCTGCGCGGCTACCGGCGCACTTTCAACGCTTATGTGGAACAGCACGGGGTGA
AGGCTCGTCAGACCGCCTTGATGGTGGAAGCGGGACAGCAGCTCGAGCCGTCCATACTGGCGTTGCGCGAGAACTTTGCG
CGGCAGCGCGGGGATATGGTTGCCCGTGTGGAAATGGTGACGCTGGGCGTGGGCGTGGGGGCGACATTGTTTGTGGTGGT
GCTGGTACTGTGGCTGCTGCGTTCCATTGTTGTTTCACTGGATGCGTTGCAGCGCTATTCCGCGGCGGTTTCCGGCGGAG
ACCTGACCACTGTTCCGCAGGGTGAATTCACCGGTGAACTTGCCCGTCTGCGCGATGATATCATGGCCATGGTTTCCGGG
CTGCGCAGCCAGATGCAGGAAGTGGCCCGCAAAGAGCACGAAGCGTTGCAGCAGGCGCAGCGCGCCGAGAGCGCAACGCA
GGAAGCTTTGAGAAAAGAACATGAGGTGCGCAGTCTGTTCGGCAGAATGCAGGGGGTGGCGGAACGCACCGCAGAGATTT
CCGGCAGGCTTGCAGAGTCGGCCGCAGGGCTGCACCATCAGGCGCAGACCGCTGCCGACGGCGCGCAGGTGCAGAAGGAC
CGCCTGACGGAAACGGCCACCGCCATGGAAGAAATGACCGCCACGGTGGTGGAGATAGCCCGCAATGCAGGCAGCGCGTC
GCAGGCGGTGGCTGTCACGAGAGAAAAAGCCCAGCAGGGGCTTGGTGTGGTGGCCCGTTCGGAAGAAGCCATGCGCAGAG
TGAACACTATTGCTCAGGCCTTGCAGGAAGATATGGCCCGCTCCGGACGCGATGCCCAATCCATCGGTCAGGTGATTGAT
GTGATAAATGAAATTGCCGACCAGACCAACCTGCTTGCGCTTAACGCGGCCATAGAAGCCGCACGTGCCGGTGATGCCGG
ACGCGGTTTTGCCGTGGTGGCGGACGAAGTGCGCAAACTGGCCGAAAAAACCATGGCCGCAACCAGAGAAGTGGCCGAGA
GAGTACATACCATTCAGTCGGCCACGCGCCAGAATCAGGCCAGCATGACCGAGGCTGTGGAATCGGTGGATGAGGCCAAC
CGGCTGGCCGCGGGGTCGGCAGAGGCGCTGCGCGAAATTGTCCGTCTGGCCGATGATGCCGCCGGGCAGGCGCAGTCCAT
CGCTGCCGCGTCGGAACAGCAGTCCGCAGCATCGGAACAGATAACCCGGGCGCTGGAAGCGGTGAACTCTGTGGCCGACA
CCACTACGGAGGGTATGCACGCCATGCTTGATTCCGCTGACGGGCTGGCCCGGACAGCGCAGGAACTGGACGGGCTGATA
ACCGAACTGAACCGCTGA

Upstream 100 bases:

>100_bases
CGTCCCCGGGCGTGCCGACCGCAGGCATACGCATGGTTCAAAAGCGATCGACAGGCAAAGACGGCGTCCCGTTGTCCGTG
GCCGATGAGCGAGGAACTAT

Downstream 100 bases:

>100_bases
GAAACAGCGGCGGGTGTATACAACCGGCGCAGCACGCCGGGATGAACGGAAAAAGGGCCGGTGTCTCCATGGGGGGCACC
GGCCCTGTCGTGCGGTTGCG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MGIRHKLLLLLGICVAGFGAQFAADRTGNILTQDVLALERLAVDAKEQVLQVRRQEKNYLLRTDSESLDSARQSLEAIRD
SLRRIAAQQPEAARQTERILDRLGVYAGAFEAAVQAHSALGNLETGIEHDFIMAARELESAVDALGDKDVLVVLLQLRRQ
EKNFVMRGGQLYVDRVDALLKGLERGLAGNSELLDKLRGYRRTFNAYVEQHGVKARQTALMVEAGQQLEPSILALRENFA
RQRGDMVARVEMVTLGVGVGATLFVVVLVLWLLRSIVVSLDALQRYSAAVSGGDLTTVPQGEFTGELARLRDDIMAMVSG
LRSQMQEVARKEHEALQQAQRAESATQEALRKEHEVRSLFGRMQGVAERTAEISGRLAESAAGLHHQAQTAADGAQVQKD
RLTETATAMEEMTATVVEIARNAGSASQAVAVTREKAQQGLGVVARSEEAMRRVNTIAQALQEDMARSGRDAQSIGQVID
VINEIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMAATREVAERVHTIQSATRQNQASMTEAVESVDEAN
RLAAGSAEALREIVRLADDAAGQAQSIAAASEQQSAASEQITRALEAVNSVADTTTEGMHAMLDSADGLARTAQELDGLI
TELNR

Sequences:

>Translated_645_residues
MGIRHKLLLLLGICVAGFGAQFAADRTGNILTQDVLALERLAVDAKEQVLQVRRQEKNYLLRTDSESLDSARQSLEAIRD
SLRRIAAQQPEAARQTERILDRLGVYAGAFEAAVQAHSALGNLETGIEHDFIMAARELESAVDALGDKDVLVVLLQLRRQ
EKNFVMRGGQLYVDRVDALLKGLERGLAGNSELLDKLRGYRRTFNAYVEQHGVKARQTALMVEAGQQLEPSILALRENFA
RQRGDMVARVEMVTLGVGVGATLFVVVLVLWLLRSIVVSLDALQRYSAAVSGGDLTTVPQGEFTGELARLRDDIMAMVSG
LRSQMQEVARKEHEALQQAQRAESATQEALRKEHEVRSLFGRMQGVAERTAEISGRLAESAAGLHHQAQTAADGAQVQKD
RLTETATAMEEMTATVVEIARNAGSASQAVAVTREKAQQGLGVVARSEEAMRRVNTIAQALQEDMARSGRDAQSIGQVID
VINEIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMAATREVAERVHTIQSATRQNQASMTEAVESVDEAN
RLAAGSAEALREIVRLADDAAGQAQSIAAASEQQSAASEQITRALEAVNSVADTTTEGMHAMLDSADGLARTAQELDGLI
TELNR
>Mature_644_residues
GIRHKLLLLLGICVAGFGAQFAADRTGNILTQDVLALERLAVDAKEQVLQVRRQEKNYLLRTDSESLDSARQSLEAIRDS
LRRIAAQQPEAARQTERILDRLGVYAGAFEAAVQAHSALGNLETGIEHDFIMAARELESAVDALGDKDVLVVLLQLRRQE
KNFVMRGGQLYVDRVDALLKGLERGLAGNSELLDKLRGYRRTFNAYVEQHGVKARQTALMVEAGQQLEPSILALRENFAR
QRGDMVARVEMVTLGVGVGATLFVVVLVLWLLRSIVVSLDALQRYSAAVSGGDLTTVPQGEFTGELARLRDDIMAMVSGL
RSQMQEVARKEHEALQQAQRAESATQEALRKEHEVRSLFGRMQGVAERTAEISGRLAESAAGLHHQAQTAADGAQVQKDR
LTETATAMEEMTATVVEIARNAGSASQAVAVTREKAQQGLGVVARSEEAMRRVNTIAQALQEDMARSGRDAQSIGQVIDV
INEIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMAATREVAERVHTIQSATRQNQASMTEAVESVDEANR
LAAGSAEALREIVRLADDAAGQAQSIAAASEQQSAASEQITRALEAVNSVADTTTEGMHAMLDSADGLARTAQELDGLIT
ELNR

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=204, Percent_Identity=38.2352941176471, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788194, Length=367, Percent_Identity=30.7901907356948, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI1788195, Length=214, Percent_Identity=35.981308411215, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1787690, Length=360, Percent_Identity=27.7777777777778, Blast_Score=93, Evalue=6e-20,
Organism=Escherichia coli, GI1789453, Length=247, Percent_Identity=31.5789473684211, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 69679; Mature: 69548

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIRHKLLLLLGICVAGFGAQFAADRTGNILTQDVLALERLAVDAKEQVLQVRRQEKNYL
CCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LRTDSESLDSARQSLEAIRDSLRRIAAQQPEAARQTERILDRLGVYAGAFEAAVQAHSAL
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNLETGIEHDFIMAARELESAVDALGDKDVLVVLLQLRRQEKNFVMRGGQLYVDRVDALL
CCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KGLERGLAGNSELLDKLRGYRRTFNAYVEQHGVKARQTALMVEAGQQLEPSILALRENFA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
RQRGDMVARVEMVTLGVGVGATLFVVVLVLWLLRSIVVSLDALQRYSAAVSGGDLTTVPQ
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GEFTGELARLRDDIMAMVSGLRSQMQEVARKEHEALQQAQRAESATQEALRKEHEVRSLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRMQGVAERTAEISGRLAESAAGLHHQAQTAADGAQVQKDRLTETATAMEEMTATVVEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGSASQAVAVTREKAQQGLGVVARSEEAMRRVNTIAQALQEDMARSGRDAQSIGQVID
HCCCCHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VINEIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMAATREVAERVHTIQS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRQNQASMTEAVESVDEANRLAAGSAEALREIVRLADDAAGQAQSIAAASEQQSAASEQ
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ITRALEAVNSVADTTTEGMHAMLDSADGLARTAQELDGLITELNR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIRHKLLLLLGICVAGFGAQFAADRTGNILTQDVLALERLAVDAKEQVLQVRRQEKNYL
CCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
LRTDSESLDSARQSLEAIRDSLRRIAAQQPEAARQTERILDRLGVYAGAFEAAVQAHSAL
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNLETGIEHDFIMAARELESAVDALGDKDVLVVLLQLRRQEKNFVMRGGQLYVDRVDALL
CCHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KGLERGLAGNSELLDKLRGYRRTFNAYVEQHGVKARQTALMVEAGQQLEPSILALRENFA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
RQRGDMVARVEMVTLGVGVGATLFVVVLVLWLLRSIVVSLDALQRYSAAVSGGDLTTVPQ
HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GEFTGELARLRDDIMAMVSGLRSQMQEVARKEHEALQQAQRAESATQEALRKEHEVRSLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRMQGVAERTAEISGRLAESAAGLHHQAQTAADGAQVQKDRLTETATAMEEMTATVVEIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGSASQAVAVTREKAQQGLGVVARSEEAMRRVNTIAQALQEDMARSGRDAQSIGQVID
HCCCCHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VINEIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMAATREVAERVHTIQS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRQNQASMTEAVESVDEANRLAAGSAEALREIVRLADDAAGQAQSIAAASEQQSAASEQ
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ITRALEAVNSVADTTTEGMHAMLDSADGLARTAQELDGLITELNR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]