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The map label for this gene is ytqB [H]

Identifier: 78355142

GI number: 78355142

Start: 86817

End: 87404

Strand: Direct

Name: ytqB [H]

Synonym: Dde_0095

Alternate gene names: 78355142

Gene position: 86817-87404 (Clockwise)

Preceding gene: 78355140

Following gene: 78355143

Centisome position: 2.33

GC content: 61.56

Gene sequence:

>588_bases
ATGAGCAGAGCGCCTGATGGGGGCATCCCCTCCATACTGGAATTTACGCACGGACTTGTGCGTCAGGTTGTGCGCAGCGC
AGATACCGTTGTGGACGCCACCGCGGGTAACGGTCACGACACCTTGTTTCTGGCAGGTCTTGTGGGACCGCAGGGGCGGG
TGTACGGATTTGACGTGCAGGCGCAGGCACTGGAAAATACGGCCAGGCGTCTGCAGCGGCACGGTGCGGAAAGGCAGGTG
ACGCTGTTTCATGCCGGACATGAAGCGGCAGGCAGGCTGCTGCCTGCCGGTACTGAAAATCTGGCCTGCGCCATGTTCAA
TCTGGGGTATCTGCCCGGCAGCGACAAGCAGGTGGTCACCACCTGGCACACCACCGAGGCGGCACTCAGGGCGGTTATGC
CGCTGCTGCGTGCGGGAGGGCTTGTGACGCTGCATCTGTATACAGGTCATGCGGGCGGCAGTGCAGAAGCCGCAGCGGTA
CACGATTTCTGCGCCGCGCTGCCGTGGGACGGCTGGCGGGTGCTGCGCTATGACTTTTTGAACAAAGAGAAAAACAGGGA
AACACTGCTGGCACTGTGCAGGCAGTAA

Upstream 100 bases:

>100_bases
GAGGCGGTGTTCAGGTGCAAGGTGTTGTGCATAAGCGGACAGCTGCGTGCAGCTTTTTGTGCAGTATGGTGCACATGTGC
AATGCCTGCAGGGGGATCAG

Downstream 100 bases:

>100_bases
CGACACTGTTGTGTGTCTGTCTTATTGATATAACAAGATTTTTGAGGATGAAAAAAATGAGCGGAGAACATCTTGTATTT
CCCGACAAAGAGGATATTGA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSRAPDGGIPSILEFTHGLVRQVVRSADTVVDATAGNGHDTLFLAGLVGPQGRVYGFDVQAQALENTARRLQRHGAERQV
TLFHAGHEAAGRLLPAGTENLACAMFNLGYLPGSDKQVVTTWHTTEAALRAVMPLLRAGGLVTLHLYTGHAGGSAEAAAV
HDFCAALPWDGWRVLRYDFLNKEKNRETLLALCRQ

Sequences:

>Translated_195_residues
MSRAPDGGIPSILEFTHGLVRQVVRSADTVVDATAGNGHDTLFLAGLVGPQGRVYGFDVQAQALENTARRLQRHGAERQV
TLFHAGHEAAGRLLPAGTENLACAMFNLGYLPGSDKQVVTTWHTTEAALRAVMPLLRAGGLVTLHLYTGHAGGSAEAAAV
HDFCAALPWDGWRVLRYDFLNKEKNRETLLALCRQ
>Mature_194_residues
SRAPDGGIPSILEFTHGLVRQVVRSADTVVDATAGNGHDTLFLAGLVGPQGRVYGFDVQAQALENTARRLQRHGAERQVT
LFHAGHEAAGRLLPAGTENLACAMFNLGYLPGSDKQVVTTWHTTEAALRAVMPLLRAGGLVTLHLYTGHAGGSAEAAAVH
DFCAALPWDGWRVLRYDFLNKEKNRETLLALCRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010719 [H]

Pfam domain/function: PF06962 rRNA_methylase [H]

EC number: NA

Molecular weight: Translated: 21022; Mature: 20891

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAPDGGIPSILEFTHGLVRQVVRSADTVVDATAGNGHDTLFLAGLVGPQGRVYGFDVQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCEEEECHH
AQALENTARRLQRHGAERQVTLFHAGHEAAGRLLPAGTENLACAMFNLGYLPGSDKQVVT
HHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
TWHTTEAALRAVMPLLRAGGLVTLHLYTGHAGGSAEAAAVHDFCAALPWDGWRVLRYDFL
EECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHH
NKEKNRETLLALCRQ
CCCCCHHHHHHHHCC
>Mature Secondary Structure 
SRAPDGGIPSILEFTHGLVRQVVRSADTVVDATAGNGHDTLFLAGLVGPQGRVYGFDVQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCEEEECHH
AQALENTARRLQRHGAERQVTLFHAGHEAAGRLLPAGTENLACAMFNLGYLPGSDKQVVT
HHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
TWHTTEAALRAVMPLLRAGGLVTLHLYTGHAGGSAEAAAVHDFCAALPWDGWRVLRYDFL
EECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHH
NKEKNRETLLALCRQ
CCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]