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The map label for this gene is fdhB [H]

Identifier: 78224618

GI number: 78224618

Start: 3847758

End: 3848675

Strand: Direct

Name: fdhB [H]

Synonym: Gmet_3428

Alternate gene names: 78224618

Gene position: 3847758-3848675 (Clockwise)

Preceding gene: 78224617

Following gene: 78224619

Centisome position: 96.26

GC content: 65.58

Gene sequence:

>918_bases
ATGAACACTACGGCTCAACAACTCGATACCACCGCCATCGCCCCTGCGGTCTACGCGACCATTACCGACGCCATCTGCCG
GGAAGCTGAGAAAGCCCTGGAGAGCGGCGCCGTGGCCGCCGTGGTGGGGTGGCAGGCGGGGCGAAGGCAAGGCACCGCCA
TGCCGGCCATCGTCACCACCCCGGCAGATACGGACAAGCTCATCTTTTCCCCGGCCTGCGTCAACAACCTGGCCCTCTAC
CTCTCCAAAGCCAAGAAGGAGATCCGGGCCAGGGGGAAGATCGCCATCGTGGTCAAGGGATGCGACCTCAAGGCGCTTGT
GGGACTCATGGGAGAGAACCAGCTGAAACGGGCGGATATCCACGTGATCGGCGTGGTCTGCCCCGGGGTGCGAGGGACAA
GCGAACCCCTCGCGAAGAAGTGCCGGGAGTGCACGGTGCACACCCCGGAAGGGGCCGATGTCACCGTGGGGACGCTCCCC
GAGTTGCCGCACTTCACGCCGGCCGAGAGCGAGGAACTGGCCCGGCTTGAGGCCATGACCCCGGCGGAGCGCTGGAGCTT
CTGGAAGGAACACTTCGCCCGTTGCATCCGCTGCTACGCCTGCCGCCAGGTCTGCCCCTTCTGCTACTGCGAGCAGTGCC
TCTGCGACCGCAACCGCCCCCAGGCGGTGGAGACCACGCCGCGGCCGGCCGGCAACATGGCCTGGCACATCGTACGGGCC
ATGCACCTGGCGGGGCGCTGCGCCGGGTGTGCCGAGTGCGAGCGGGCCTGCCCCATGGACATCCCCTTGAATCTCCTGAA
CCGCAAGATGGCCAAGGAGTTGAAGGAGCTCTACGGCCACGAGGCGGGGTTCGAGGTGAAGGAGAAGGGTCCCCTGGCGG
AGTACCGGGAAAACGACGACCAGAGTTTTATAAAATAA

Upstream 100 bases:

>100_bases
ATGCGGGAGTTCAAGGAACTGGAGGCGCAGGAGCAGTGGTCCGGAGCAATAGACTCTCCGGAGCTGCAGGAAGCGTACGA
GGCGGTGGGGAACATCTGAC

Downstream 100 bases:

>100_bases
CCAAAACCTGGAATAACACGGAACAACGGAGCACACGGAGAAAACCGAATAAACTGACAAGACAACGGGTCGCAAATCAT
TTCAGGTACCCCTAATGATC

Product: heterodisulfide reductase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MNTTAQQLDTTAIAPAVYATITDAICREAEKALESGAVAAVVGWQAGRRQGTAMPAIVTTPADTDKLIFSPACVNNLALY
LSKAKKEIRARGKIAIVVKGCDLKALVGLMGENQLKRADIHVIGVVCPGVRGTSEPLAKKCRECTVHTPEGADVTVGTLP
ELPHFTPAESEELARLEAMTPAERWSFWKEHFARCIRCYACRQVCPFCYCEQCLCDRNRPQAVETTPRPAGNMAWHIVRA
MHLAGRCAGCAECERACPMDIPLNLLNRKMAKELKELYGHEAGFEVKEKGPLAEYRENDDQSFIK

Sequences:

>Translated_305_residues
MNTTAQQLDTTAIAPAVYATITDAICREAEKALESGAVAAVVGWQAGRRQGTAMPAIVTTPADTDKLIFSPACVNNLALY
LSKAKKEIRARGKIAIVVKGCDLKALVGLMGENQLKRADIHVIGVVCPGVRGTSEPLAKKCRECTVHTPEGADVTVGTLP
ELPHFTPAESEELARLEAMTPAERWSFWKEHFARCIRCYACRQVCPFCYCEQCLCDRNRPQAVETTPRPAGNMAWHIVRA
MHLAGRCAGCAECERACPMDIPLNLLNRKMAKELKELYGHEAGFEVKEKGPLAEYRENDDQSFIK
>Mature_305_residues
MNTTAQQLDTTAIAPAVYATITDAICREAEKALESGAVAAVVGWQAGRRQGTAMPAIVTTPADTDKLIFSPACVNNLALY
LSKAKKEIRARGKIAIVVKGCDLKALVGLMGENQLKRADIHVIGVVCPGVRGTSEPLAKKCRECTVHTPEGADVTVGTLP
ELPHFTPAESEELARLEAMTPAERWSFWKEHFARCIRCYACRQVCPFCYCEQCLCDRNRPQAVETTPRPAGNMAWHIVRA
MHLAGRCAGCAECERACPMDIPLNLLNRKMAKELKELYGHEAGFEVKEKGPLAEYRENDDQSFIK

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 33475; Mature: 33475

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00178 AA_TRNA_LIGASE_I ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTAQQLDTTAIAPAVYATITDAICREAEKALESGAVAAVVGWQAGRRQGTAMPAIVTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEC
PADTDKLIFSPACVNNLALYLSKAKKEIRARGKIAIVVKGCDLKALVGLMGENQLKRADI
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCHHHCCE
HVIGVVCPGVRGTSEPLAKKCRECTVHTPEGADVTVGTLPELPHFTPAESEELARLEAMT
EEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCC
PAERWSFWKEHFARCIRCYACRQVCPFCYCEQCLCDRNRPQAVETTPRPAGNMAWHIVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
MHLAGRCAGCAECERACPMDIPLNLLNRKMAKELKELYGHEAGFEVKEKGPLAEYRENDD
HHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
QSFIK
HHCCC
>Mature Secondary Structure
MNTTAQQLDTTAIAPAVYATITDAICREAEKALESGAVAAVVGWQAGRRQGTAMPAIVTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEC
PADTDKLIFSPACVNNLALYLSKAKKEIRARGKIAIVVKGCDLKALVGLMGENQLKRADI
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCHHHCCE
HVIGVVCPGVRGTSEPLAKKCRECTVHTPEGADVTVGTLPELPHFTPAESEELARLEAMT
EEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCC
PAERWSFWKEHFARCIRCYACRQVCPFCYCEQCLCDRNRPQAVETTPRPAGNMAWHIVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
MHLAGRCAGCAECERACPMDIPLNLLNRKMAKELKELYGHEAGFEVKEKGPLAEYRENDD
HHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
QSFIK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9006048 [H]