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The map label for this gene is fliP

Identifier: 78224289

GI number: 78224289

Start: 3497167

End: 3497919

Strand: Reverse

Name: fliP

Synonym: Gmet_3097

Alternate gene names: 78224289

Gene position: 3497919-3497167 (Counterclockwise)

Preceding gene: 78224290

Following gene: 78224288

Centisome position: 87.5

GC content: 61.49

Gene sequence:

>753_bases
ATGACCAAACGTATTCTCATCATCCTCACAACCATCGCCGTGGTTGCCGGATTCGCCGCCGCGGCCCTGGCCGAGCCGGT
GATCCCGACCCTCTCCATTGGCGTCGGCAAGGCCTCCAAGCCGGGCGACGTCTCCACGGTCCTTCAGATCTTCTTCCTCA
TGACGGTGCTGTCGCTGGCGCCGGGGCTCATGATGATGACCACCTCCTTCACCCGGATCGTCATCGTCCTCTCGTTCCTG
CGCAATGCCATCGGCACCCAGCAATCTCCCCCGAACCAGATCATCGTGGCCCTGTCGCTCTTCCTCACCTTCTTTGTCAT
GAGCCCCGTCTGGCAGCAGGTGAACACCCAGGCGATCCAGCCCTACCGGGCCGCTCAAATCACCCAGGAGGAGGCTTTCA
GGCGGGCCCAGGTCCCCGTGCGCAAGTTCATGTTCTCCCAGACCCGGGAGAAGGACCTGGCGCTCTTCATCAACCTTTCC
AAGCTGCAGCGCCCCCGCAACGCCGACGATATCCCGACCCTCACCCTCATCCCGGCCTTCATGATCTCGGAGCTGCGGAC
GGCGTTCCAGATCGGCTTCCTCATCTTCATCCCGTTCCTGGTTATCGACATGGTGGTGGCCTCGGTCCTCATGTCCATGG
GCATGATGATGCTGCCGCCGGTCATGATCTCGCTCCCCTTCAAGATCCTCCTCTTCGTCCTGGTGGACGGGTGGGGGCTG
GTTATCGGCTCGCTTGTCAAGAGTTTTGGGTAA

Upstream 100 bases:

>100_bases
CTCGATGCCATGGCCGCGAAGATTGCCGCCATCAAGCAGGGGCGGGCCGACTCCCCCAGTCGGCGCGCCGAAAAATTCTG
ACACCAGGGACGGTGTTGTC

Downstream 100 bases:

>100_bases
GGCCGGGACCAGGGACCGGAAAAAGCATTAAAGCCTTTCCCGGTCCCCGATCCCCGGTCCCCGATCCCGGAGGTTTCCAT
GAGTCCCGATCTCGTCGTTC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTKRILIILTTIAVVAGFAAAALAEPVIPTLSIGVGKASKPGDVSTVLQIFFLMTVLSLAPGLMMMTTSFTRIVIVLSFL
RNAIGTQQSPPNQIIVALSLFLTFFVMSPVWQQVNTQAIQPYRAAQITQEEAFRRAQVPVRKFMFSQTREKDLALFINLS
KLQRPRNADDIPTLTLIPAFMISELRTAFQIGFLIFIPFLVIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWGL
VIGSLVKSFG

Sequences:

>Translated_250_residues
MTKRILIILTTIAVVAGFAAAALAEPVIPTLSIGVGKASKPGDVSTVLQIFFLMTVLSLAPGLMMMTTSFTRIVIVLSFL
RNAIGTQQSPPNQIIVALSLFLTFFVMSPVWQQVNTQAIQPYRAAQITQEEAFRRAQVPVRKFMFSQTREKDLALFINLS
KLQRPRNADDIPTLTLIPAFMISELRTAFQIGFLIFIPFLVIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWGL
VIGSLVKSFG
>Mature_249_residues
TKRILIILTTIAVVAGFAAAALAEPVIPTLSIGVGKASKPGDVSTVLQIFFLMTVLSLAPGLMMMTTSFTRIVIVLSFLR
NAIGTQQSPPNQIIVALSLFLTFFVMSPVWQQVNTQAIQPYRAAQITQEEAFRRAQVPVRKFMFSQTREKDLALFINLSK
LQRPRNADDIPTLTLIPAFMISELRTAFQIGFLIFIPFLVIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWGLV
IGSLVKSFG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=219, Percent_Identity=50.2283105022831, Blast_Score=224, Evalue=4e-60,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27556; Mature: 27425

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure 
TKRILIILTTIAVVAGFAAAALAEPVIPTLSIGVGKASKPGDVSTVLQIFFLMTVLSLA
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
PGLMMMTTSFTRIVIVLSFLRNAIGTQQSPPNQIIVALSLFLTFFVMSPVWQQVNTQAIQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PYRAAQITQEEAFRRAQVPVRKFMFSQTREKDLALFINLSKLQRPRNADDIPTLTLIPAF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHCCCCCCCCCCHHHHHHHH
MISELRTAFQIGFLIFIPFLVIDMVVASVLMSMGMMMLPPVMISLPFKILLFVLVDGWGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
VIGSLVKSFG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]