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The map label for this gene is yutI [H]

Identifier: 78224272

GI number: 78224272

Start: 3476630

End: 3476854

Strand: Reverse

Name: yutI [H]

Synonym: Gmet_3080

Alternate gene names: 78224272

Gene position: 3476854-3476630 (Counterclockwise)

Preceding gene: 78224273

Following gene: 78224271

Centisome position: 86.98

GC content: 63.56

Gene sequence:

>225_bases
ATGCTGGAAGAAGTGAAGAAGGTTCTCGATACGGTGCGCCCCGCGCTCCAGGCGGACGGCGGTGACGTGGAGCTGGTGGA
GGTGACCGAGGACGGCGTGGTGAAGGTGAAGCTGGTGGGGGCCTGCGGCCACTGCCCCATGTCCACCATGACCCTCAAGA
TGGGGATCGAGCGGACCCTGAAGGAGAAGGTCCCCGGCGTGAAGGAAGTGATTTCCGTCCAGTAG

Upstream 100 bases:

>100_bases
TCTCCTTGGGGGAGAGGGTGGCCGAAGGCCGGGTGAGGGGAAGTGACGGACAGCGGAAGTTAGAATAAGCAGAGCACACA
AACCCAAGGAGGAGACAACA

Downstream 100 bases:

>100_bases
CCGACGTACGCGTTACCCGGATCAGCCTGAAGGTAACATCAAGGAGGATGGCATGGGCTACAAGGTCAAAACATTTGGCA
TGGAAATCCGTCCCCTCAAG

Product: nitrogen-fixing NifU-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MLEEVKKVLDTVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKEKVPGVKEVISVQ

Sequences:

>Translated_74_residues
MLEEVKKVLDTVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKEKVPGVKEVISVQ
>Mature_74_residues
MLEEVKKVLDTVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKEKVPGVKEVISVQ

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593023, Length=71, Percent_Identity=46.4788732394366, Blast_Score=62, Evalue=7e-11,
Organism=Homo sapiens, GI50593019, Length=71, Percent_Identity=46.4788732394366, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17541876, Length=71, Percent_Identity=52.112676056338, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 7964; Mature: 7964

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEEVKKVLDTVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTL
CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
KEKVPGVKEVISVQ
HHHCCCHHHHHCCC
>Mature Secondary Structure
MLEEVKKVLDTVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTL
CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHH
KEKVPGVKEVISVQ
HHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]