Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78224271
Identifier: 78224271
GI number: 78224271
Start: 3476377
End: 3476577
Strand: Reverse
Name: 78224271
Synonym: Gmet_3079
Alternate gene names: NA
Gene position: 3476577-3476377 (Counterclockwise)
Preceding gene: 78224272
Following gene: 78224270
Centisome position: 86.97
GC content: 55.22
Gene sequence:
>201_bases ATGGGCTACAAGGTCAAAACATTTGGCATGGAAATCCGTCCCCTCAAGACCATGAAGGAGCTTTCCTCTCTGGACGCCAT GGTCAACGACTTCGTGACAAACAACGGCGTGAAGCGGATCATCTCCGTTTCCGACTCGCCGACCACCGACGACAAGGGTG AGACCATCGGCCTTGTCCGGGTGGTTGCCTACGAAGACTGA
Upstream 100 bases:
>100_bases CTGAAGGAGAAGGTCCCCGGCGTGAAGGAAGTGATTTCCGTCCAGTAGCCGACGTACGCGTTACCCGGATCAGCCTGAAG GTAACATCAAGGAGGATGGC
Downstream 100 bases:
>100_bases AAAGAACGCAAGATGACAAGCAGGGAGGCGCGGGGGAGACTTCGCGCCTCTTCGCTTTTCCCCTCCATCATCTCCCTTGC CCTCCTTGCCCGCCTGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MGYKVKTFGMEIRPLKTMKELSSLDAMVNDFVTNNGVKRIISVSDSPTTDDKGETIGLVRVVAYED
Sequences:
>Translated_66_residues MGYKVKTFGMEIRPLKTMKELSSLDAMVNDFVTNNGVKRIISVSDSPTTDDKGETIGLVRVVAYED >Mature_65_residues GYKVKTFGMEIRPLKTMKELSSLDAMVNDFVTNNGVKRIISVSDSPTTDDKGETIGLVRVVAYED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7313; Mature: 7181
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKVKTFGMEIRPLKTMKELSSLDAMVNDFVTNNGVKRIISVSDSPTTDDKGETIGLVR CCEEECCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEE VVAYED EEEECC >Mature Secondary Structure GYKVKTFGMEIRPLKTMKELSSLDAMVNDFVTNNGVKRIISVSDSPTTDDKGETIGLVR CEEECCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEE VVAYED EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA