Click here to switch to the map view.

The map label for this gene is 78223504

Identifier: 78223504

GI number: 78223504

Start: 2608733

End: 2610862

Strand: Reverse

Name: 78223504

Synonym: Gmet_2301

Alternate gene names: NA

Gene position: 2610862-2608733 (Counterclockwise)

Preceding gene: 78223505

Following gene: 78223503

Centisome position: 65.31

GC content: 61.5

Gene sequence:

>2130_bases
GTGAAACGCCTGTTCATTCCCGCCATGCTGCTCCTCCTTCTGCCGGTGCTCCTCTTTGCCAAGGATTACCAGGTTGTTAC
CTTCAAGACCGACACCGCCGGTGCCATTAACTTCAGCCATCCCGTCCACCTGAAGGCCCTCGGCAACAACTGCACCCTCT
GCCACAACAAGATCTTCACGATCGGCACCAAGTCGGCGCCGGTGACCATGAAGGAGATGGAGGCGGGCAAGTCCTGCGGC
GCCTGCCACAATGCGAAGCGAGCCTTCGCCCTCGGCGAGTGCACCCGCTGCCACGTGACAAAGGAGGTGCCGGTCGATAT
CCCCAATTTCGGCGCCGTCATTTTTAGTCACAAATTCCACCTGGGGCTCGGCGCCTACGGTTGCGCCGACTGCCACAACG
CCATCTTCGGCGCCCGTACCGATAACCCCCACATTACCATGAAGGAGATGGAAGGGGGACGTTCGTGCGGTGCCTGCCAC
GACGGCAAAACCGCCTTCTCGGTCAAGGGGGACTGCACCAAGTGCCACACGGTGCGGGATATCCCTTTTGCTGCCGACGC
CACCTTCAGCCACGCTGCCCACTTGGGATTCGGCCATGTCTGTGGCGACTGCCACAGCAAGCTCTTTGTGGCCGGCCCCA
AAAGCAAGCGCTACACCATGCTGGAGATGGAGACCCAGCAGTCGTGCGGCGGTTGTCACAACGGCAGTACCGCCTTCTCG
GTCAAGGGGGACTGCGGCCGGTGTCATACGGCTGTCAGGGATGTGACCTTCGCGAAAAGCGATGCATTCTTCAGCCATAA
GATCCATACAGCTCTGCTGGGGTGTGGCAGCTGCCACAGCGGTATCTTCGTCGGTGGCGTCAACAGCCGCCGCTACACCA
TGGCCGAAATGGAGAAGGGACTCTCCTGCGGGGTCTGCCACGAGGACAAGACCGTCTTCGGCGTCCGGGGCAACTGTGAC
CGCTGCCACGTGAAGACGCGGAATGTGAGCTTCAAGACGGGGGCTGCCGGCACGGTTGCCTTCCGGCACGATTTCCACCG
CCAGATGTATGGCTGCGGAGACTGTCACAACGGCATCTTCACCGCCGGTGCGGGGCGCAAGAGCTTCACCATGGCCGAGA
TGGGGCAGGGAAAATCGTGCGGCGCCTGCCATGACGGCAAGACCGCCTTTGCCGCCACTACTGCCGCCAACTGTGGCAAA
TGCCATCCCCTGCGGGATGTGATCCTTCCCCACGATGCCCGTTTCCCCCACGTGAAGCACCTGGAATCCCAAACCTGCAG
CGACTGCCATAACGGGCTCTTCCTCTCCGGTCCCGGAAACAAGCGCTGGACCATGGCGCAGATGGAGCAGGGCAATTCCT
GTGGCGCCTGCCATGACGGCTCGATCGCCTTCACCGTCAAGGGATCGTGCGGCACCTGCCATACCTCCACCGTGGAGGTG
GCGATTCCGGTCCGCCAGACGGGAGTCACCCGCTTCAGCCACACGTTCCACGCAGGCCTCCATGGCTGCACCGATTGCCA
TAACGGGATCTTCGGAGCCGGCGCATCGGCCAGGCGCCACACCATGGCCGACATGGAGAAAGGGGGCTCGTGCGGCGCCT
GCCACGATGGGAAAAGCGCCTTCACCGTGAAGGATAACTGTACCAAATGCCATCCGGTGAAGGAGATCTCCTTCAAGGAA
CCGGGCGCTCTCTTCAGCCATACCTTCCACCTCAACGCCTATTCGTGCGCCGACTGCCACGATGCCCTCTTTAAGCCTGA
TTCCGAGAACCGGCGCTGGACCATGGCCGACATGGAGAAGGGCAAATCGTGCGGCGCCTGCCATGACGGCAAGAGTGCCT
TTGGCGTCGCCGGTGCCTGCGAGAAGTGCCATCCGGCCACCAAGGGGATCAAGTACGAGCTTCCCGGCGATGTGGGGAGC
GTCCTCTTCAGCCATAAATCCCACTCCGCCAAGGGATACGGTTGCGTTGACTGCCACAGCAAGATTATCGTGGCCGGCGC
CGGGAGGAAATCCCATACCATGAAGGAGATGGAGCAGGGACAGTCGTGCGGCGCCTGCCACGGTTTCAGCATGGCCTTCA
GTGTTAAGGATCCCATCCACTGCGAGAAGTGTCACCAGAGGCTCTATTGA

Upstream 100 bases:

>100_bases
CGGGGCCAACGACTATCTCACGAAACCGATTCAGGCCGGCAAAATCCTTGCCGTGGCAAGGGAATTGCTACGAATCGGCT
AAAAATTGTTCGGAGTTCCC

Downstream 100 bases:

>100_bases
TGCATCCCTGAACCAGCCTCCATCACCTTTCGTCGCCCCCGCCGGCCCTGTGAACATGTTTGCATGGCCGGCGTTTTTAT
GCTAAAAACAAACCTTTGAT

Product: cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome C; Lipoprotein Cytochrome C

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MKRLFIPAMLLLLLPVLLFAKDYQVVTFKTDTAGAINFSHPVHLKALGNNCTLCHNKIFTIGTKSAPVTMKEMEAGKSCG
ACHNAKRAFALGECTRCHVTKEVPVDIPNFGAVIFSHKFHLGLGAYGCADCHNAIFGARTDNPHITMKEMEGGRSCGACH
DGKTAFSVKGDCTKCHTVRDIPFAADATFSHAAHLGFGHVCGDCHSKLFVAGPKSKRYTMLEMETQQSCGGCHNGSTAFS
VKGDCGRCHTAVRDVTFAKSDAFFSHKIHTALLGCGSCHSGIFVGGVNSRRYTMAEMEKGLSCGVCHEDKTVFGVRGNCD
RCHVKTRNVSFKTGAAGTVAFRHDFHRQMYGCGDCHNGIFTAGAGRKSFTMAEMGQGKSCGACHDGKTAFAATTAANCGK
CHPLRDVILPHDARFPHVKHLESQTCSDCHNGLFLSGPGNKRWTMAQMEQGNSCGACHDGSIAFTVKGSCGTCHTSTVEV
AIPVRQTGVTRFSHTFHAGLHGCTDCHNGIFGAGASARRHTMADMEKGGSCGACHDGKSAFTVKDNCTKCHPVKEISFKE
PGALFSHTFHLNAYSCADCHDALFKPDSENRRWTMADMEKGKSCGACHDGKSAFGVAGACEKCHPATKGIKYELPGDVGS
VLFSHKSHSAKGYGCVDCHSKIIVAGAGRKSHTMKEMEQGQSCGACHGFSMAFSVKDPIHCEKCHQRLY

Sequences:

>Translated_709_residues
MKRLFIPAMLLLLLPVLLFAKDYQVVTFKTDTAGAINFSHPVHLKALGNNCTLCHNKIFTIGTKSAPVTMKEMEAGKSCG
ACHNAKRAFALGECTRCHVTKEVPVDIPNFGAVIFSHKFHLGLGAYGCADCHNAIFGARTDNPHITMKEMEGGRSCGACH
DGKTAFSVKGDCTKCHTVRDIPFAADATFSHAAHLGFGHVCGDCHSKLFVAGPKSKRYTMLEMETQQSCGGCHNGSTAFS
VKGDCGRCHTAVRDVTFAKSDAFFSHKIHTALLGCGSCHSGIFVGGVNSRRYTMAEMEKGLSCGVCHEDKTVFGVRGNCD
RCHVKTRNVSFKTGAAGTVAFRHDFHRQMYGCGDCHNGIFTAGAGRKSFTMAEMGQGKSCGACHDGKTAFAATTAANCGK
CHPLRDVILPHDARFPHVKHLESQTCSDCHNGLFLSGPGNKRWTMAQMEQGNSCGACHDGSIAFTVKGSCGTCHTSTVEV
AIPVRQTGVTRFSHTFHAGLHGCTDCHNGIFGAGASARRHTMADMEKGGSCGACHDGKSAFTVKDNCTKCHPVKEISFKE
PGALFSHTFHLNAYSCADCHDALFKPDSENRRWTMADMEKGKSCGACHDGKSAFGVAGACEKCHPATKGIKYELPGDVGS
VLFSHKSHSAKGYGCVDCHSKIIVAGAGRKSHTMKEMEQGQSCGACHGFSMAFSVKDPIHCEKCHQRLY
>Mature_709_residues
MKRLFIPAMLLLLLPVLLFAKDYQVVTFKTDTAGAINFSHPVHLKALGNNCTLCHNKIFTIGTKSAPVTMKEMEAGKSCG
ACHNAKRAFALGECTRCHVTKEVPVDIPNFGAVIFSHKFHLGLGAYGCADCHNAIFGARTDNPHITMKEMEGGRSCGACH
DGKTAFSVKGDCTKCHTVRDIPFAADATFSHAAHLGFGHVCGDCHSKLFVAGPKSKRYTMLEMETQQSCGGCHNGSTAFS
VKGDCGRCHTAVRDVTFAKSDAFFSHKIHTALLGCGSCHSGIFVGGVNSRRYTMAEMEKGLSCGVCHEDKTVFGVRGNCD
RCHVKTRNVSFKTGAAGTVAFRHDFHRQMYGCGDCHNGIFTAGAGRKSFTMAEMGQGKSCGACHDGKTAFAATTAANCGK
CHPLRDVILPHDARFPHVKHLESQTCSDCHNGLFLSGPGNKRWTMAQMEQGNSCGACHDGSIAFTVKGSCGTCHTSTVEV
AIPVRQTGVTRFSHTFHAGLHGCTDCHNGIFGAGASARRHTMADMEKGGSCGACHDGKSAFTVKDNCTKCHPVKEISFKE
PGALFSHTFHLNAYSCADCHDALFKPDSENRRWTMADMEKGKSCGACHDGKSAFGVAGACEKCHPATKGIKYELPGDVGS
VLFSHKSHSAKGYGCVDCHSKIIVAGAGRKSHTMKEMEQGQSCGACHGFSMAFSVKDPIHCEKCHQRLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75961; Mature: 75961

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
7.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFIPAMLLLLLPVLLFAKDYQVVTFKTDTAGAINFSHPVHLKALGNNCTLCHNKIFT
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCEEEEEECCCEEEECCEEEE
IGTKSAPVTMKEMEAGKSCGACHNAKRAFALGECTRCHVTKEVPVDIPNFGAVIFSHKFH
EECCCCCEEHHHHHCCCCCCCHHCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEE
LGLGAYGCADCHNAIFGARTDNPHITMKEMEGGRSCGACHDGKTAFSVKGDCTKCHTVRD
ECCCCCCHHHHHHCEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEC
IPFAADATFSHAAHLGFGHVCGDCHSKLFVAGPKSKRYTMLEMETQQSCGGCHNGSTAFS
CCCCCCCCHHHHHHCCCHHHHHHCCCEEEEECCCCCCEEEEEECHHHHCCCCCCCCEEEE
VKGDCGRCHTAVRDVTFAKSDAFFSHKIHTALLGCGSCHSGIFVGGVNSRRYTMAEMEKG
ECCCCHHHHHHHHHHEEECCCCHHHHHHHHHHEECCCCCCCEEEECCCCCEEEHHHHHCC
LSCGVCHEDKTVFGVRGNCDRCHVKTRNVSFKTGAAGTVAFRHDFHRQMYGCGDCHNGIF
CCCCEECCCCEEEEECCCCCEEEEEECCEEEECCCCEEEHHHHHHHHHHCCCCCCCCCEE
TAGAGRKSFTMAEMGQGKSCGACHDGKTAFAATTAANCGKCHPLRDVILPHDARFPHVKH
ECCCCCCCEEHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCHHH
LESQTCSDCHNGLFLSGPGNKRWTMAQMEQGNSCGACHDGSIAFTVKGSCGTCHTSTVEV
HHHHHHHHHHCCEEEECCCCCCEEEHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
AIPVRQTGVTRFSHTFHAGLHGCTDCHNGIFGAGASARRHTMADMEKGGSCGACHDGKSA
EEEEHHCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCE
FTVKDNCTKCHPVKEISFKEPGALFSHTFHLNAYSCADCHDALFKPDSENRRWTMADMEK
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCCEEEEHHHHC
GKSCGACHDGKSAFGVAGACEKCHPATKGIKYELPGDVGSVLFSHKSHSAKGYGCVDCHS
CCCCCCCCCCCCCCCCCCCHHHCCCHHCCEEEECCCCHHHHHHHCCCCCCCCCEEEECCC
KIIVAGAGRKSHTMKEMEQGQSCGACHGFSMAFSVKDPIHCEKCHQRLY
EEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCC
>Mature Secondary Structure
MKRLFIPAMLLLLLPVLLFAKDYQVVTFKTDTAGAINFSHPVHLKALGNNCTLCHNKIFT
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCEEEEEECCCEEEECCEEEE
IGTKSAPVTMKEMEAGKSCGACHNAKRAFALGECTRCHVTKEVPVDIPNFGAVIFSHKFH
EECCCCCEEHHHHHCCCCCCCHHCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEEEE
LGLGAYGCADCHNAIFGARTDNPHITMKEMEGGRSCGACHDGKTAFSVKGDCTKCHTVRD
ECCCCCCHHHHHHCEEECCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEC
IPFAADATFSHAAHLGFGHVCGDCHSKLFVAGPKSKRYTMLEMETQQSCGGCHNGSTAFS
CCCCCCCCHHHHHHCCCHHHHHHCCCEEEEECCCCCCEEEEEECHHHHCCCCCCCCEEEE
VKGDCGRCHTAVRDVTFAKSDAFFSHKIHTALLGCGSCHSGIFVGGVNSRRYTMAEMEKG
ECCCCHHHHHHHHHHEEECCCCHHHHHHHHHHEECCCCCCCEEEECCCCCEEEHHHHHCC
LSCGVCHEDKTVFGVRGNCDRCHVKTRNVSFKTGAAGTVAFRHDFHRQMYGCGDCHNGIF
CCCCEECCCCEEEEECCCCCEEEEEECCEEEECCCCEEEHHHHHHHHHHCCCCCCCCCEE
TAGAGRKSFTMAEMGQGKSCGACHDGKTAFAATTAANCGKCHPLRDVILPHDARFPHVKH
ECCCCCCCEEHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCHHH
LESQTCSDCHNGLFLSGPGNKRWTMAQMEQGNSCGACHDGSIAFTVKGSCGTCHTSTVEV
HHHHHHHHHHCCEEEECCCCCCEEEHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEE
AIPVRQTGVTRFSHTFHAGLHGCTDCHNGIFGAGASARRHTMADMEKGGSCGACHDGKSA
EEEEHHCCCHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCE
FTVKDNCTKCHPVKEISFKEPGALFSHTFHLNAYSCADCHDALFKPDSENRRWTMADMEK
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCCEEEEHHHHC
GKSCGACHDGKSAFGVAGACEKCHPATKGIKYELPGDVGSVLFSHKSHSAKGYGCVDCHS
CCCCCCCCCCCCCCCCCCCHHHCCCHHCCEEEECCCCHHHHHHHCCCCCCCCCEEEECCC
KIIVAGAGRKSHTMKEMEQGQSCGACHGFSMAFSVKDPIHCEKCHQRLY
EEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA