Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222647
Identifier: 78222647
GI number: 78222647
Start: 1604981
End: 1605784
Strand: Direct
Name: 78222647
Synonym: Gmet_1435
Alternate gene names: NA
Gene position: 1604981-1605784 (Clockwise)
Preceding gene: 78222646
Following gene: 78222648
Centisome position: 40.15
GC content: 53.23
Gene sequence:
>804_bases ATGGTCCTTGATTATCGTGAACGGAAACCGGTCAACAAAAACCGGCCAAAATCGAAACCCGTCGGCCTCTTTGTCATAGC ATTCGGCCTGGTTGCAGTCTGCTCCTTTGCCCTTGGTGTTCTGACGGACCGTTTTCTGCTTTCTCCTCGCAGCCTTAAGG TCGAAAATGCCCAGGCACCCCCTTCTGTCGCGCCGAAGAACGGCCCTCAGGAGCAACCCTCTTCAACTGCCAAGGATTCG GTGACCGCCAAACAGGGTGCAGCCCCTGCGCTTCAGGAACCATCTCTGACTTTTTACGAGACGTTACCCAAGGGCGGAAA AATTATTCTCGGGAGCGGCATGAATCCCAAAATGCCAAAGGTGCTAACCGCATCCCCCGCAAAAACAGCCACTGAGGCTT TGCCAAAAAATGACCAGGTTTTGCCGCGACAGACAGAAGCTGTGATGGTGCAAAAAGCCGACAAACCTGCCATTCCTGTC TCATCTCCAGAGAAAAGTGCGGCTGCAGATAATGCTGAACGCCCGAAGGCGGCCGGCGAAACAGCCAAAGAAGTATCGGC GAAAAAAACTGCGGTATCCAAGGGGAAATTCTCCGTGCAGGTGGTATCCGCAAGGGAACGCAAGGAAGCAGACGCCATCA AATCGGGGTTACAGGAAAAGGGGTTTGCTGCCTATGTTGTTGAGTCCGTCGTTCCCGGTAAGGGGACATGGTATCGCGTA CGGGTGGGGAAACAAATGGATCAGTCGGCTGCCGCGAAGCTTGCAAAACAGCTCGGTAAGGCAGCAATAATAATTCCTGA ATAG
Upstream 100 bases:
>100_bases GGCACGGCTCTTCCTCCTCAAGGGCGTTGCTCAAGTACTGAAGAACGGGCTTGCACTCCTGGGTGTCTCGGCACCGGAAA AGATGTAGCTGGAAGGGTTT
Downstream 100 bases:
>100_bases TAAGAGTGATTTTTTTATTGACTCGAGATCGTGCTCATAGTATAAACAAATCTCTTGTGACGCGGGGTGGAGCAGTCTGG TAGCTCGTCGGGCTCATAAC
Product: sporulation-related protein
Products: NA
Alternate protein names: SPOR Domain-Containing Protein; Sporulation-Related Protein; Sporulation Domain Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MVLDYRERKPVNKNRPKSKPVGLFVIAFGLVAVCSFALGVLTDRFLLSPRSLKVENAQAPPSVAPKNGPQEQPSSTAKDS VTAKQGAAPALQEPSLTFYETLPKGGKIILGSGMNPKMPKVLTASPAKTATEALPKNDQVLPRQTEAVMVQKADKPAIPV SSPEKSAAADNAERPKAAGETAKEVSAKKTAVSKGKFSVQVVSARERKEADAIKSGLQEKGFAAYVVESVVPGKGTWYRV RVGKQMDQSAAAKLAKQLGKAAIIIPE
Sequences:
>Translated_267_residues MVLDYRERKPVNKNRPKSKPVGLFVIAFGLVAVCSFALGVLTDRFLLSPRSLKVENAQAPPSVAPKNGPQEQPSSTAKDS VTAKQGAAPALQEPSLTFYETLPKGGKIILGSGMNPKMPKVLTASPAKTATEALPKNDQVLPRQTEAVMVQKADKPAIPV SSPEKSAAADNAERPKAAGETAKEVSAKKTAVSKGKFSVQVVSARERKEADAIKSGLQEKGFAAYVVESVVPGKGTWYRV RVGKQMDQSAAAKLAKQLGKAAIIIPE >Mature_267_residues MVLDYRERKPVNKNRPKSKPVGLFVIAFGLVAVCSFALGVLTDRFLLSPRSLKVENAQAPPSVAPKNGPQEQPSSTAKDS VTAKQGAAPALQEPSLTFYETLPKGGKIILGSGMNPKMPKVLTASPAKTATEALPKNDQVLPRQTEAVMVQKADKPAIPV SSPEKSAAADNAERPKAAGETAKEVSAKKTAVSKGKFSVQVVSARERKEADAIKSGLQEKGFAAYVVESVVPGKGTWYRV RVGKQMDQSAAAKLAKQLGKAAIIIPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28255; Mature: 28255
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLDYRERKPVNKNRPKSKPVGLFVIAFGLVAVCSFALGVLTDRFLLSPRSLKVENAQAP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC PSVAPKNGPQEQPSSTAKDSVTAKQGAAPALQEPSLTFYETLPKGGKIILGSGMNPKMPK CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCC VLTASPAKTATEALPKNDQVLPRQTEAVMVQKADKPAIPVSSPEKSAAADNAERPKAAGE EEECCCCHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCH TAKEVSAKKTAVSKGKFSVQVVSARERKEADAIKSGLQEKGFAAYVVESVVPGKGTWYRV HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEE RVGKQMDQSAAAKLAKQLGKAAIIIPE ECCCCCCHHHHHHHHHHHCCEEEEECC >Mature Secondary Structure MVLDYRERKPVNKNRPKSKPVGLFVIAFGLVAVCSFALGVLTDRFLLSPRSLKVENAQAP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC PSVAPKNGPQEQPSSTAKDSVTAKQGAAPALQEPSLTFYETLPKGGKIILGSGMNPKMPK CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCC VLTASPAKTATEALPKNDQVLPRQTEAVMVQKADKPAIPVSSPEKSAAADNAERPKAAGE EEECCCCHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCH TAKEVSAKKTAVSKGKFSVQVVSARERKEADAIKSGLQEKGFAAYVVESVVPGKGTWYRV HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEE RVGKQMDQSAAAKLAKQLGKAAIIIPE ECCCCCCHHHHHHHHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA