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The map label for this gene is slp [H]

Identifier: 78222641

GI number: 78222641

Start: 1599590

End: 1600162

Strand: Reverse

Name: slp [H]

Synonym: Gmet_1429

Alternate gene names: 78222641

Gene position: 1600162-1599590 (Counterclockwise)

Preceding gene: 78222661

Following gene: 78222591

Centisome position: 40.03

GC content: 52.36

Gene sequence:

>573_bases
ATGTATTTGCAGAGAATATCAATCCTTATAATCCTGCTCACAACCTTGTCATTATCGGGGTGTGCCCATGTCATCAGTGA
GCAGTCACGGTCTCTGGTTGACCCCACCATTACCTACGCCATGCTCAAAGAAAAACCCGATGCGTTTGTCGGGAAGTACG
TGCAACTGGGAGGGGTAATTGTCGGGGTCAAGAACACTACCACAGGAAGTCAATTGGAGATAATGCAGGTTGCTCTCGAC
AAGACGGGTATGCCGGAGGATACATTTCGCTCCGAGGGAAGGTTTCTCGCCATTTCCGAATCGTTCCTCGACAGCATGAT
CTATAAACCGGATCGCCTCGTTACCCTGGTCGGGGAAGTGAAGGGCAAAAAAGTAATGCCGGTCGACGAAGTTGAGTACA
CCTATCCGGTCCTCGCAATCAAAGAGATTTACGTCTGGAAAAGCTACGACTACGAGAAGGGCTACCCCTACCCCACTCCG
CCACCCTACTCCTTTTATGATCCCTACTACTACGGATACTGGCCCGGGCCGTACTGGTACCGCCCCCTGGGGCCGGTTTA
CCGGCGCTGGTGA

Upstream 100 bases:

>100_bases
TCATGTCAGTGCATAGACTGCTGGACGTCCCGGACAGGCGAGGATGTTCGAGCAACACAGCAGAGGGGCGGAAAATGTCG
CTCCACCGGGAGGGGCCACG

Downstream 100 bases:

>100_bases
CGCAAAAGGACAGGGCGGATCCCATAACCCGCCCTGTCTCTCTCCTCACCTAACAACATCCTGCCTGGTCACCTTTCAAG
CAGAAGCTCCATGAGCCGGT

Product: Outer membrane lipoprotein Slp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MYLQRISILIILLTTLSLSGCAHVISEQSRSLVDPTITYAMLKEKPDAFVGKYVQLGGVIVGVKNTTTGSQLEIMQVALD
KTGMPEDTFRSEGRFLAISESFLDSMIYKPDRLVTLVGEVKGKKVMPVDEVEYTYPVLAIKEIYVWKSYDYEKGYPYPTP
PPYSFYDPYYYGYWPGPYWYRPLGPVYRRW

Sequences:

>Translated_190_residues
MYLQRISILIILLTTLSLSGCAHVISEQSRSLVDPTITYAMLKEKPDAFVGKYVQLGGVIVGVKNTTTGSQLEIMQVALD
KTGMPEDTFRSEGRFLAISESFLDSMIYKPDRLVTLVGEVKGKKVMPVDEVEYTYPVLAIKEIYVWKSYDYEKGYPYPTP
PPYSFYDPYYYGYWPGPYWYRPLGPVYRRW
>Mature_190_residues
MYLQRISILIILLTTLSLSGCAHVISEQSRSLVDPTITYAMLKEKPDAFVGKYVQLGGVIVGVKNTTTGSQLEIMQVALD
KTGMPEDTFRSEGRFLAISESFLDSMIYKPDRLVTLVGEVKGKKVMPVDEVEYTYPVLAIKEIYVWKSYDYEKGYPYPTP
PPYSFYDPYYYGYWPGPYWYRPLGPVYRRW

Specific function: The induction of slp may help to stabilize the outer membrane during carbon starvation and stationary phase [H]

COG id: COG3065

COG function: function code M; Starvation-inducible outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082278, Length=174, Percent_Identity=25.2873563218391, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1788108, Length=174, Percent_Identity=29.3103448275862, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004658 [H]

Pfam domain/function: PF03843 Slp [H]

EC number: NA

Molecular weight: Translated: 21880; Mature: 21880

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLQRISILIILLTTLSLSGCAHVISEQSRSLVDPTITYAMLKEKPDAFVGKYVQLGGVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCEEE
VGVKNTTTGSQLEIMQVALDKTGMPEDTFRSEGRFLAISESFLDSMIYKPDRLVTLVGEV
EEECCCCCCCHHHHHEEHHCCCCCCCHHHHCCCCEEEEEHHHHHHHHCCCCCEEEEEECC
KGKKVMPVDEVEYTYPVLAIKEIYVWKSYDYEKGYPYPTPPPYSFYDPYYYGYWPGPYWY
CCCCCCCCCCCCHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
RPLGPVYRRW
CCCCHHHHCC
>Mature Secondary Structure
MYLQRISILIILLTTLSLSGCAHVISEQSRSLVDPTITYAMLKEKPDAFVGKYVQLGGVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCEEE
VGVKNTTTGSQLEIMQVALDKTGMPEDTFRSEGRFLAISESFLDSMIYKPDRLVTLVGEV
EEECCCCCCCHHHHHEEHHCCCCCCCHHHHCCCCEEEEEHHHHHHHHCCCCCEEEEEECC
KGKKVMPVDEVEYTYPVLAIKEIYVWKSYDYEKGYPYPTPPPYSFYDPYYYGYWPGPYWY
CCCCCCCCCCCCHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
RPLGPVYRRW
CCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022277; 8041620; 9278503 [H]