Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222635
Identifier: 78222635
GI number: 78222635
Start: 1590480
End: 1590797
Strand: Direct
Name: 78222635
Synonym: Gmet_1423
Alternate gene names: NA
Gene position: 1590480-1590797 (Clockwise)
Preceding gene: 78222634
Following gene: 78222636
Centisome position: 39.79
GC content: 50.31
Gene sequence:
>318_bases GTGCCTGCCGACCTGTCCCATCTTCTCCCAACCCAGTTCATCAAGAAGTCTTTGCAGACTAGTGAGCTACATCGAAGCGA GCATGCTGTCGAGGGAATGCTCATGGACATCCATGGCTGGCACAACGATGAACCAATAAGAGACAGTCGCTACCTCCAAA ACAAAAAGCTGACCATCGGGTCGGCTTTATTGTTCGTGAACTGCAAGCCCACTTTCGTTGCGGGTTTTGGTTTTGCAAGG TGCGTCAGTTTCTGCTACGATACCTTCCCAATTCCTTCAACACCAAGGCTTTACCGATGTCAGAACTCACCCCGATGA
Upstream 100 bases:
>100_bases TTAGCTCTGGGTATACAACTAGGTATACTAAGGAGCGAGAGGCTTTGTCATATCCAACACACCTCAAAGGGTCGGTAGTC GCTTTTACCACAAAATAAAG
Downstream 100 bases:
>100_bases TGCGCCAGTATCTGGAGATTAAGGCCGACCATCCGGACTCGATCCTCTTCTTCAGGCTCGGCGATTTCTATGAGATGTTT CTCGATGATGCCGTCAAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MPADLSHLLPTQFIKKSLQTSELHRSEHAVEGMLMDIHGWHNDEPIRDSRYLQNKKLTIGSALLFVNCKPTFVAGFGFAR CVSFCYDTFPIPSTPRLYRCQNSPR
Sequences:
>Translated_105_residues MPADLSHLLPTQFIKKSLQTSELHRSEHAVEGMLMDIHGWHNDEPIRDSRYLQNKKLTIGSALLFVNCKPTFVAGFGFAR CVSFCYDTFPIPSTPRLYRCQNSPR >Mature_104_residues PADLSHLLPTQFIKKSLQTSELHRSEHAVEGMLMDIHGWHNDEPIRDSRYLQNKKLTIGSALLFVNCKPTFVAGFGFARC VSFCYDTFPIPSTPRLYRCQNSPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12026; Mature: 11895
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADLSHLLPTQFIKKSLQTSELHRSEHAVEGMLMDIHGWHNDEPIRDSRYLQNKKLTIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHCCCCEEEC SALLFVNCKPTFVAGFGFARCVSFCYDTFPIPSTPRLYRCQNSPR CEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC >Mature Secondary Structure PADLSHLLPTQFIKKSLQTSELHRSEHAVEGMLMDIHGWHNDEPIRDSRYLQNKKLTIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHCCCCEEEC SALLFVNCKPTFVAGFGFARCVSFCYDTFPIPSTPRLYRCQNSPR CEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA