Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222601
Identifier: 78222601
GI number: 78222601
Start: 1555058
End: 1556068
Strand: Direct
Name: 78222601
Synonym: Gmet_1389
Alternate gene names: NA
Gene position: 1555058-1556068 (Clockwise)
Preceding gene: 78222600
Following gene: 78222602
Centisome position: 38.9
GC content: 63.4
Gene sequence:
>1011_bases GTGACCGCTCTCGCCGGCGACAAACGCCTCTGGCTCGGGATCGGGGTCAGTATTGCCCTGCTGGCGCTCCTCTTCCGCTC CGTCGACCCGGCGGAACTCATCCGGGCCTTTCGGGGGATCCAGGGAATCTGGCTCGTCCCCGCCGTTGTCTTTACCTTCC TCAGCTACCTCATGAGGGCGGTCCGCTGGAAGTACCTCCTCTCACCCCTCAAGCAGACCTCCTTCCCAAACCTTGTCTCC GCAACCCTTATCGGGTACATGGCCAACAACCTCCTGCCGGCCCGGCTCGGGGAGCTGGTGCGGGCCTACGTTCTCGGAGA GCAGGAGGGGATCGGCACGGGGGCGGTGGTGGCGACCCTGGTCATCGACCGGCTGGCCGACGGTTTCACGGTGCTCCTTC TGCTGGTGACGGCCGTCTTCACTCTGCGTCTTCCGCCGGGGAGCGAAGCGGCCCAGCAGGGGCTCGTGGCGGGGGGGTAC ATCACCCTCGGGCTCTACCTGGCGGTCGTGGTCTTCCTGGTCCTCCTGAGGCGGAACACCATGGGGACCATCCGGCTCCT TGAGCGGCTTCTGAGGCCTTTTCCCGGTAAAATTGCCGAGAAGGTCATCCCCTTTCTCGGGGCGTTCATCGACGGGGCGC GGATTACCCCCCACTGGAGGGAGCGGCTGGCCCTTGTGGCCTCGTCACTCGTCATCTGGGGGTTCGCGGTTTTCCCCATC CATTGCGTGCTCAAGGCCTTCGGGCTGAATTTTCCCATCCCTGTTTCGCTTTTTATCATGGTTCTCCTCGTTTTCGCCGT CATGGTCCCGGCCTCTCCCGGTTTCGTGGGGACCTACCACGCCGCGTGCGTGTACGGATTACTCGCCCTGGGGGTGCCGA GAGGGATGGCCTTGAGTGTGGCCATTGTCATTCATGGAATAAATTTTTTCCCCGTCATCGTTGTGGGACTTGCCTGCCTC TGGCGGGAGAACCTGTCGCTCTCGGCCCTTAGCAAGAAGGCGGTGCGGTGA
Upstream 100 bases:
>100_bases TCCTCCAGGAGGCCATCGCCCGTGACGTGGCGCGGTGCCGGGAGCTTTTGCGCGACGTTGCCATCATCGAGTACCAGGAG TACCTGGCAGAGGAAGCCCC
Downstream 100 bases:
>100_bases TGGAGCACAGGCTCGCGTGGTATCCCACCCCCAGCTACCTGGTGAAGCGGAAGGCTATCGTTGAGTTTCTGGAGAAGGTG CCGGTGCGGCGGGTCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTALAGDKRLWLGIGVSIALLALLFRSVDPAELIRAFRGIQGIWLVPAVVFTFLSYLMRAVRWKYLLSPLKQTSFPNLVS ATLIGYMANNLLPARLGELVRAYVLGEQEGIGTGAVVATLVIDRLADGFTVLLLLVTAVFTLRLPPGSEAAQQGLVAGGY ITLGLYLAVVVFLVLLRRNTMGTIRLLERLLRPFPGKIAEKVIPFLGAFIDGARITPHWRERLALVASSLVIWGFAVFPI HCVLKAFGLNFPIPVSLFIMVLLVFAVMVPASPGFVGTYHAACVYGLLALGVPRGMALSVAIVIHGINFFPVIVVGLACL WRENLSLSALSKKAVR
Sequences:
>Translated_336_residues MTALAGDKRLWLGIGVSIALLALLFRSVDPAELIRAFRGIQGIWLVPAVVFTFLSYLMRAVRWKYLLSPLKQTSFPNLVS ATLIGYMANNLLPARLGELVRAYVLGEQEGIGTGAVVATLVIDRLADGFTVLLLLVTAVFTLRLPPGSEAAQQGLVAGGY ITLGLYLAVVVFLVLLRRNTMGTIRLLERLLRPFPGKIAEKVIPFLGAFIDGARITPHWRERLALVASSLVIWGFAVFPI HCVLKAFGLNFPIPVSLFIMVLLVFAVMVPASPGFVGTYHAACVYGLLALGVPRGMALSVAIVIHGINFFPVIVVGLACL WRENLSLSALSKKAVR >Mature_335_residues TALAGDKRLWLGIGVSIALLALLFRSVDPAELIRAFRGIQGIWLVPAVVFTFLSYLMRAVRWKYLLSPLKQTSFPNLVSA TLIGYMANNLLPARLGELVRAYVLGEQEGIGTGAVVATLVIDRLADGFTVLLLLVTAVFTLRLPPGSEAAQQGLVAGGYI TLGLYLAVVVFLVLLRRNTMGTIRLLERLLRPFPGKIAEKVIPFLGAFIDGARITPHWRERLALVASSLVIWGFAVFPIH CVLKAFGLNFPIPVSLFIMVLLVFAVMVPASPGFVGTYHAACVYGLLALGVPRGMALSVAIVIHGINFFPVIVVGLACLW RENLSLSALSKKAVR
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36373; Mature: 36242
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALAGDKRLWLGIGVSIALLALLFRSVDPAELIRAFRGIQGIWLVPAVVFTFLSYLMRA CCCCCCCCCCEEHHCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VRWKYLLSPLKQTSFPNLVSATLIGYMANNLLPARLGELVRAYVLGEQEGIGTGAVVATL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH VIDRLADGFTVLLLLVTAVFTLRLPPGSEAAQQGLVAGGYITLGLYLAVVVFLVLLRRNT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC MGTIRLLERLLRPFPGKIAEKVIPFLGAFIDGARITPHWRERLALVASSLVIWGFAVFPI CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HCVLKAFGLNFPIPVSLFIMVLLVFAVMVPASPGFVGTYHAACVYGLLALGVPRGMALSV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH AIVIHGINFFPVIVVGLACLWRENLSLSALSKKAVR HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCC >Mature Secondary Structure TALAGDKRLWLGIGVSIALLALLFRSVDPAELIRAFRGIQGIWLVPAVVFTFLSYLMRA CCCCCCCCCEEHHCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH VRWKYLLSPLKQTSFPNLVSATLIGYMANNLLPARLGELVRAYVLGEQEGIGTGAVVATL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH VIDRLADGFTVLLLLVTAVFTLRLPPGSEAAQQGLVAGGYITLGLYLAVVVFLVLLRRNT HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC MGTIRLLERLLRPFPGKIAEKVIPFLGAFIDGARITPHWRERLALVASSLVIWGFAVFPI CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH HCVLKAFGLNFPIPVSLFIMVLLVFAVMVPASPGFVGTYHAACVYGLLALGVPRGMALSV HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH AIVIHGINFFPVIVVGLACLWRENLSLSALSKKAVR HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA