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The map label for this gene is yibP [H]

Identifier: 78222562

GI number: 78222562

Start: 1511428

End: 1512150

Strand: Reverse

Name: yibP [H]

Synonym: Gmet_1350

Alternate gene names: 78222562

Gene position: 1512150-1511428 (Counterclockwise)

Preceding gene: 78222586

Following gene: 78222555

Centisome position: 37.83

GC content: 62.1

Gene sequence:

>723_bases
ATGAGAAAGAGCACCCTCATAATCGCTGCACTCGTTATTGTCCTCCCCCGGGAAGGAGTCGCCGACATCTACCGCTATGT
GGATGAAGAGGGAGTGGTCTGCTTCACCGATGCCCCCGGGAAGAGCGGTGCGACGCTGGTCATGAAGGAGCGGCCTGCCC
CTCGCCGCGGCAGACGGAGCATACCCGGCCATCTGGCCGCCACCGGCATCGGAGAAAAGCCGTCACAGGCGTCATCTCCC
ACGTTTTCCCCTACCCTTCCCGTCCACGGGAGAATCTCCTCACTGGTTGGGCTCCGCCACGACCCCATCAACGGCAACCT
CCGCGAACACCACGGAATCGACATCGCCATTGCCGAAGGAACCGCCGTCCGTCCGGTGGCTCCGGGAAGGGTGGTCTTTG
CCGGATTGCGCGGTGGCTATGGCAACATGGTCATCGTGGACCACGGCGACGGAACCATTACTCTCTATGCCCACAATTCC
GTCAATCTTGTGGCTGAAAATGACTCAGTGGACGGCACCTCCCCCATCGCCCTCTCGGGCTCCACGGGGCGCTCAACGGG
CCCCCACCTCCACTTCGAAGCATGGCGGGGCGAAACCAACATCACCTCCACCTTCCTGGCTGGGGGACCGTCCATGGGGA
GTGCCTCCAACCGGCGCAAAGTCGATGCCATCCGTCGCATCGTCCAGGCGGACGGGACCCTCTATTTAAGCAATATCCAC
TGA

Upstream 100 bases:

>100_bases
GAATCACCATGCACAAATCAGAAGCATCGCACGAAAAATATACTCTCATCTCAAGCTTGCAGGCTCTGATGCCGATAGGT
ATAGTACCGGAGTCCAGACC

Downstream 100 bases:

>100_bases
CTCCACAACTATATCAAACATCTTACTATTTTCTCTCATGCCCCTTTGTCCTGCGCGTGGGTATGGCAGTCCACGGGTCA
TCGGGCCACGGGTGCTTTGG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRKSTLIIAALVIVLPREGVADIYRYVDEEGVVCFTDAPGKSGATLVMKERPAPRRGRRSIPGHLAATGIGEKPSQASSP
TFSPTLPVHGRISSLVGLRHDPINGNLREHHGIDIAIAEGTAVRPVAPGRVVFAGLRGGYGNMVIVDHGDGTITLYAHNS
VNLVAENDSVDGTSPIALSGSTGRSTGPHLHFEAWRGETNITSTFLAGGPSMGSASNRRKVDAIRRIVQADGTLYLSNIH

Sequences:

>Translated_240_residues
MRKSTLIIAALVIVLPREGVADIYRYVDEEGVVCFTDAPGKSGATLVMKERPAPRRGRRSIPGHLAATGIGEKPSQASSP
TFSPTLPVHGRISSLVGLRHDPINGNLREHHGIDIAIAEGTAVRPVAPGRVVFAGLRGGYGNMVIVDHGDGTITLYAHNS
VNLVAENDSVDGTSPIALSGSTGRSTGPHLHFEAWRGETNITSTFLAGGPSMGSASNRRKVDAIRRIVQADGTLYLSNIH
>Mature_240_residues
MRKSTLIIAALVIVLPREGVADIYRYVDEEGVVCFTDAPGKSGATLVMKERPAPRRGRRSIPGHLAATGIGEKPSQASSP
TFSPTLPVHGRISSLVGLRHDPINGNLREHHGIDIAIAEGTAVRPVAPGRVVFAGLRGGYGNMVIVDHGDGTITLYAHNS
VNLVAENDSVDGTSPIALSGSTGRSTGPHLHFEAWRGETNITSTFLAGGPSMGSASNRRKVDAIRRIVQADGTLYLSNIH

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=125, Percent_Identity=38.4, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87081989, Length=97, Percent_Identity=44.3298969072165, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789099, Length=86, Percent_Identity=48.8372093023256, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 25338; Mature: 25338

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSTLIIAALVIVLPREGVADIYRYVDEEGVVCFTDAPGKSGATLVMKERPAPRRGRRS
CCCHHHHHEEHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCC
IPGHLAATGIGEKPSQASSPTFSPTLPVHGRISSLVGLRHDPINGNLREHHGIDIAIAEG
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHCCEEEEEECC
TAVRPVAPGRVVFAGLRGGYGNMVIVDHGDGTITLYAHNSVNLVAENDSVDGTSPIALSG
CEECCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCEEEEECCCCCCCCCCEEEEC
STGRSTGPHLHFEAWRGETNITSTFLAGGPSMGSASNRRKVDAIRRIVQADGTLYLSNIH
CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MRKSTLIIAALVIVLPREGVADIYRYVDEEGVVCFTDAPGKSGATLVMKERPAPRRGRRS
CCCHHHHHEEHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCC
IPGHLAATGIGEKPSQASSPTFSPTLPVHGRISSLVGLRHDPINGNLREHHGIDIAIAEG
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHCCEEEEEECC
TAVRPVAPGRVVFAGLRGGYGNMVIVDHGDGTITLYAHNSVNLVAENDSVDGTSPIALSG
CEECCCCCCEEEEEECCCCCCCEEEEECCCCEEEEEEECCEEEEECCCCCCCCCCEEEEC
STGRSTGPHLHFEAWRGETNITSTFLAGGPSMGSASNRRKVDAIRRIVQADGTLYLSNIH
CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]