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The map label for this gene is 78222557

Identifier: 78222557

GI number: 78222557

Start: 1503856

End: 1505562

Strand: Direct

Name: 78222557

Synonym: Gmet_1345

Alternate gene names: NA

Gene position: 1503856-1505562 (Clockwise)

Preceding gene: 78222556

Following gene: 78222558

Centisome position: 37.62

GC content: 63.56

Gene sequence:

>1707_bases
ATGTTCCTGAGCGGGGACCGGAGCCGTGATATCCGCCTGGAAAACGGCGACACAGTCTTCGTGCCGGTCATCGGGCCGGT
GGTTGCCGTGGCGGGGGAGGTCAAGCGGCCCGGCATTTATGAGGTCAAGGGGAAAACGGCCCTGCCGGCGCTTCTTGCCA
TGGCAGGGGGGATAACCGCTGCCGGCGACACGGGGCGGATTCAGGTGGAGCGGATCGAGGGGAACAGCACCCGGGTGGTC
GCCGATTACCTGACCGATGGAAGGTCGCCGGACACTGAACTGGCCAAGGTCGAGGTGCGGGACCACGACCTGGTGAACGT
CTTCCCGGTCCGCGAGGCGATGCGCGAGGTGGTGACCCTGGCGGGGAATGTGGCACGTCCCGGCCCCTATCAGTTCCGGA
AGGGGATGCGGGTGAAGGACCTCATTCCCGACGCGTCGGTTCTTCTTCCCGAGTCATACCTGGAGAGTGCCGAGATTACC
CGCCTCTCGCCCACCGACTACCGCCGCGAGGTCATGACCGTCAATCTCCGTGAGGCCTTGAAGGGGAATCCGGCCGACAA
CGTGGAGTTGCAGGAGCAGGATACGATCAAGATTTTCTCCCGGGACGAGATGGTGGAGCGTCCCCGGGTTTCCATCAATG
GACAGGTGGTGAATCCCGGCATCTATGACTACTTTCCCCGGATGACGGTCCGTGACCTGGTCACCGCTGCCGGCAGCCCC
AAGCGCAACGCCTACCTGGAGAGCGCCGAACTGACAAGGGTGGCGGTTGGCGGCAACAGTGCCAAGGCGTCCCGCCTGGA
AATCAACCTGGGCAAGGCCCTTGCCGGAGACCCGGCCCACAACCTGGTGCTGGAGCCCGAAGATGCCCTGATCGTACGGG
GAATCGAGAACTGGCTTGAGGCCACCGATCGCTTCGTGACCCTGAGGGGAGAGGTGAAATTCCCCGGGACCTACTCCATT
GCCAAGGGGGAGCGCCTGAGCTCGGTCATTGCCCGAGCCGGCGGTTTCACCGACAAGGCCTATCTGAAGGGGGCCAAGTT
CAAGCGGAAGTCGGTTCGCGACGAGCAGCAGAAGAGGATGGACGAGGTGATCACCCGAACCGAGCAGGAAATCCTCCGCA
AGCAGGGGGAACTGGCGGCGGTTGCGGCGTCCAAGGAGGAACTCGAAGCGACCCGCACGGCCCTGGAAGGGCTCCAGAAG
AGCCTGGCCAAGCTGCGAGAGTCAAAGGCCGAAGGGCGTGTGGTGATCCGCCTTGCCCAACTGGACACGTTCAGGAAGTC
TCCCTATGATCTGGAGCTCATGGGGGGAGACATCCTCGAAGTGCCCCAGGTTTCCAGTGTCGTGAACGTCATGGGGCAGG
TCTACAACCCCACCTCCTTTGTCCATTTGCCGGGTGAAGATGTGGCTCACTACCTGAAGGATGCCGGCGGCCCCACCCGT
GACGGCGAAGAAGACGACATGTACATCATCAGCGCCGACGGGTCGGTTCTCAGCCGCCATCAGACCTCCTTCGGCATCAG
CTGGAGCGATTCCCAGCGCCGCTGGACCTTTGGCGGGTTCCTGGCAACGCCCCTCGATCCGGGGGACACCCTGGTGGTGC
CCCAGAAGCTTGAGCGGGTCGCCTGGATGCGGGAGATCAAGGACATGACCACTATCCTGTCGCAGGTTGCCCTGACCGCC
GGGGTGGTTGTGGCGGCCGGGCTGTAG

Upstream 100 bases:

>100_bases
ATGCCCTTGCCGCGGCAGGCGGGCCATCCAAAAACGGCAGCCTCCGCTCGATCCGGATTTCCCGGGGGGGAAGGCGGTCC
AGGAGATCGACCTCTACGAC

Downstream 100 bases:

>100_bases
GGGCGAGACGACATGACTGATCCCATGAGAAATGAACAGATGGTCGAAGAGGACGAGATCAACCTTCTGGAGCTGCTCCA
GGTGCTGGTACGGCGCAAGC

Product: polysaccharide biosynthesis/export domain-containing protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Protein; Polysaccharide Biosynthesis/Export Protein; Polysialic Acid Transporter KpsD; ClpX ATPase Regulatory Subunit; Polysaccharide Export Periplasmic Protein; Capsule Polysaccharide Export System Periplasmic Protein; Polysialic Acid Transport Protein KpsD; Capsule Transport Protein OtnA; Polysaccharide Biosynthesis; Polysialic Acid Transporter; Polysaccharide Export Outer Membrane Protein; Periplasmic Protein Involved In Polysaccharide Export

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MFLSGDRSRDIRLENGDTVFVPVIGPVVAVAGEVKRPGIYEVKGKTALPALLAMAGGITAAGDTGRIQVERIEGNSTRVV
ADYLTDGRSPDTELAKVEVRDHDLVNVFPVREAMREVVTLAGNVARPGPYQFRKGMRVKDLIPDASVLLPESYLESAEIT
RLSPTDYRREVMTVNLREALKGNPADNVELQEQDTIKIFSRDEMVERPRVSINGQVVNPGIYDYFPRMTVRDLVTAAGSP
KRNAYLESAELTRVAVGGNSAKASRLEINLGKALAGDPAHNLVLEPEDALIVRGIENWLEATDRFVTLRGEVKFPGTYSI
AKGERLSSVIARAGGFTDKAYLKGAKFKRKSVRDEQQKRMDEVITRTEQEILRKQGELAAVAASKEELEATRTALEGLQK
SLAKLRESKAEGRVVIRLAQLDTFRKSPYDLELMGGDILEVPQVSSVVNVMGQVYNPTSFVHLPGEDVAHYLKDAGGPTR
DGEEDDMYIISADGSVLSRHQTSFGISWSDSQRRWTFGGFLATPLDPGDTLVVPQKLERVAWMREIKDMTTILSQVALTA
GVVVAAGL

Sequences:

>Translated_568_residues
MFLSGDRSRDIRLENGDTVFVPVIGPVVAVAGEVKRPGIYEVKGKTALPALLAMAGGITAAGDTGRIQVERIEGNSTRVV
ADYLTDGRSPDTELAKVEVRDHDLVNVFPVREAMREVVTLAGNVARPGPYQFRKGMRVKDLIPDASVLLPESYLESAEIT
RLSPTDYRREVMTVNLREALKGNPADNVELQEQDTIKIFSRDEMVERPRVSINGQVVNPGIYDYFPRMTVRDLVTAAGSP
KRNAYLESAELTRVAVGGNSAKASRLEINLGKALAGDPAHNLVLEPEDALIVRGIENWLEATDRFVTLRGEVKFPGTYSI
AKGERLSSVIARAGGFTDKAYLKGAKFKRKSVRDEQQKRMDEVITRTEQEILRKQGELAAVAASKEELEATRTALEGLQK
SLAKLRESKAEGRVVIRLAQLDTFRKSPYDLELMGGDILEVPQVSSVVNVMGQVYNPTSFVHLPGEDVAHYLKDAGGPTR
DGEEDDMYIISADGSVLSRHQTSFGISWSDSQRRWTFGGFLATPLDPGDTLVVPQKLERVAWMREIKDMTTILSQVALTA
GVVVAAGL
>Mature_568_residues
MFLSGDRSRDIRLENGDTVFVPVIGPVVAVAGEVKRPGIYEVKGKTALPALLAMAGGITAAGDTGRIQVERIEGNSTRVV
ADYLTDGRSPDTELAKVEVRDHDLVNVFPVREAMREVVTLAGNVARPGPYQFRKGMRVKDLIPDASVLLPESYLESAEIT
RLSPTDYRREVMTVNLREALKGNPADNVELQEQDTIKIFSRDEMVERPRVSINGQVVNPGIYDYFPRMTVRDLVTAAGSP
KRNAYLESAELTRVAVGGNSAKASRLEINLGKALAGDPAHNLVLEPEDALIVRGIENWLEATDRFVTLRGEVKFPGTYSI
AKGERLSSVIARAGGFTDKAYLKGAKFKRKSVRDEQQKRMDEVITRTEQEILRKQGELAAVAASKEELEATRTALEGLQK
SLAKLRESKAEGRVVIRLAQLDTFRKSPYDLELMGGDILEVPQVSSVVNVMGQVYNPTSFVHLPGEDVAHYLKDAGGPTR
DGEEDDMYIISADGSVLSRHQTSFGISWSDSQRRWTFGGFLATPLDPGDTLVVPQKLERVAWMREIKDMTTILSQVALTA
GVVVAAGL

Specific function: Unknown

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62320; Mature: 62320

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSGDRSRDIRLENGDTVFVPVIGPVVAVAGEVKRPGIYEVKGKTALPALLAMAGGITA
CCCCCCCCCCEEEECCCEEEEEEHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCEE
AGDTGRIQVERIEGNSTRVVADYLTDGRSPDTELAKVEVRDHDLVNVFPVREAMREVVTL
CCCCCEEEEEEECCCCCEEEEEHHCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHH
AGNVARPGPYQFRKGMRVKDLIPDASVLLPESYLESAEITRLSPTDYRREVMTVNLREAL
HCCCCCCCCHHHHCCCCHHHCCCCCHHCCCHHHHCCCCEEECCCCHHHHHHEEEEHHHHH
KGNPADNVELQEQDTIKIFSRDEMVERPRVSINGQVVNPGIYDYFPRMTVRDLVTAAGSP
CCCCCCCCEECCCCCEEEEECHHHHHCCCEEECCEEECCCHHHHHCCHHHHHHHHHCCCC
KRNAYLESAELTRVAVGGNSAKASRLEINLGKALAGDPAHNLVLEPEDALIVRGIENWLE
CCCCEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCEEEHHHHHHHH
ATDRFVTLRGEVKFPGTYSIAKGERLSSVIARAGGFTDKAYLKGAKFKRKSVRDEQQKRM
HCCCEEEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHH
DEVITRTEQEILRKQGELAAVAASKEELEATRTALEGLQKSLAKLRESKAEGRVVIRLAQ
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEH
LDTFRKSPYDLELMGGDILEVPQVSSVVNVMGQVYNPTSFVHLPGEDVAHYLKDAGGPTR
HHHHCCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCC
DGEEDDMYIISADGSVLSRHQTSFGISWSDSQRRWTFGGFLATPLDPGDTLVVPQKLERV
CCCCCCEEEEECCCCHHHCCCHHCCCEECCCCCEEEECCEEECCCCCCCEEECHHHHHHH
AWMREIKDMTTILSQVALTAGVVVAAGL
HHHHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MFLSGDRSRDIRLENGDTVFVPVIGPVVAVAGEVKRPGIYEVKGKTALPALLAMAGGITA
CCCCCCCCCCEEEECCCEEEEEEHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCEE
AGDTGRIQVERIEGNSTRVVADYLTDGRSPDTELAKVEVRDHDLVNVFPVREAMREVVTL
CCCCCEEEEEEECCCCCEEEEEHHCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHH
AGNVARPGPYQFRKGMRVKDLIPDASVLLPESYLESAEITRLSPTDYRREVMTVNLREAL
HCCCCCCCCHHHHCCCCHHHCCCCCHHCCCHHHHCCCCEEECCCCHHHHHHEEEEHHHHH
KGNPADNVELQEQDTIKIFSRDEMVERPRVSINGQVVNPGIYDYFPRMTVRDLVTAAGSP
CCCCCCCCEECCCCCEEEEECHHHHHCCCEEECCEEECCCHHHHHCCHHHHHHHHHCCCC
KRNAYLESAELTRVAVGGNSAKASRLEINLGKALAGDPAHNLVLEPEDALIVRGIENWLE
CCCCEECCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCEEEHHHHHHHH
ATDRFVTLRGEVKFPGTYSIAKGERLSSVIARAGGFTDKAYLKGAKFKRKSVRDEQQKRM
HCCCEEEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHH
DEVITRTEQEILRKQGELAAVAASKEELEATRTALEGLQKSLAKLRESKAEGRVVIRLAQ
HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEH
LDTFRKSPYDLELMGGDILEVPQVSSVVNVMGQVYNPTSFVHLPGEDVAHYLKDAGGPTR
HHHHCCCCCEEEEECCCEECCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCC
DGEEDDMYIISADGSVLSRHQTSFGISWSDSQRRWTFGGFLATPLDPGDTLVVPQKLERV
CCCCCCEEEEECCCCHHHCCCHHCCCEECCCCCEEEECCEEECCCCCCCEEECHHHHHHH
AWMREIKDMTTILSQVALTAGVVVAAGL
HHHHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA