Click here to switch to the map view.

The map label for this gene is 78222549

Identifier: 78222549

GI number: 78222549

Start: 1494288

End: 1495472

Strand: Direct

Name: 78222549

Synonym: Gmet_1336

Alternate gene names: NA

Gene position: 1494288-1495472 (Clockwise)

Preceding gene: 78222548

Following gene: 304570570

Centisome position: 37.38

GC content: 54.85

Gene sequence:

>1185_bases
ATGATATCCCGCGCACTTTATCCATTCCTGTCAGAGGCGCTTGACTCTTCACCTGCCGTCGCGTTGCTGGGGCCACGCCA
GGTCGGCAAGACCACCCTGGCCCTTGAGATAGGCAAGGTGCGCGGCGCACTGTATCTGGACCTTGAATCCGAGCAGGATC
TCGCCAAGCTTGCCCAGCCCGAATTGTATCTTGAGGATCATCAGGACAGGCTGGTGATCTTTGATGAAGTGCATCGTCTG
CCAGGATTATTCCCTGTATTGCGTGGATTTATTGACAAGGGGCGCCGTGCCGGATTGCGCACGGGGCGCTTTCTTCTGCT
TGGTTCTGCTTCGCTTGATTTGCTGAAACAGTCCGGCGAAACATTGGCCGGGAGGATTTCCTACCTTGAGTTATCCCCTT
TTAATATCCTTGAAACAGGCGAGAGGACATCAGAAGATCTCTGGGTTGCAGGCGGGTTCCCGGAAAGCCTGCTGGCGAAA
AACCCGCGCCAGAGCCTGCGCTGGAGACAGGATTTCATCCGCACCTATCTTGAACGCGATATTCCGCAGTTCGGCCCGCG
GATAGCCGCAGAAGCGTTGCGCCGTTTTTGGGTAATGCTGGCCCATAATCAAGGGGGGGTACTGAATGCGGCTCAATTTT
CACGCAATCTGGGTGTGGATGTAAAAACCGTCACTAATTACCTTGATCTGCTTGTTGATCTGATGCTGGTCCGTCGTCTC
CCACCCTGGCACGGCAATATCGGGAAGAGGCTGGTCAAGTCACCAAAGGTGTATGTGCGTGACAGCGGCCTTGTGCATGC
ATTGCTCGGCATACAGGATAAAGAGGGTTTGCTGGCGCACCCGGTTGTCGGGCAGAGCTGGGAGTGTTTTGTGGTGGAAA
ATCTCCTTGGGGCAGGGATTGGGGCTCCGCAGGGTTTTTTCTACCGGACCGGCGGAGGTGCTGAAATAGATCTGCTGCTG
ACATGGCCTGACGAGGAGATATGGGCTGTGGAGATCAAGAGAAGCCTCAGCCCCAGGCCTGAACGGGGATTTTACTCGGC
CTGTTCCGATCTGGCCCCGGCGAAAAAATATGTCGTGTACCCTGGTGCCGAACGCTATCGAATTGCACCTGACATAGAGG
CGATTCCACTCCCGCAGCTGGCTGCCGAAATTCACGCAAAGGCAATTTTGAATGTTGAATTTTGA

Upstream 100 bases:

>100_bases
GGTTGAATTTTGGATGTCGAATTCTGGATGACTGGCAAAAGAGCAGATTTGGCATGTTTTATCCTTGCAAATCATGGAGT
GATATTCCAAAATTACAAAT

Downstream 100 bases:

>100_bases
ATTTGTCTCACGGGCAGGATCCCACATGAAAAGAGTATTCGATTTAGTTCTGTCATTTCTGCTGATGCTGGTTTTTTCTC
TTCCGATGCTCGTGACGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MISRALYPFLSEALDSSPAVALLGPRQVGKTTLALEIGKVRGALYLDLESEQDLAKLAQPELYLEDHQDRLVIFDEVHRL
PGLFPVLRGFIDKGRRAGLRTGRFLLLGSASLDLLKQSGETLAGRISYLELSPFNILETGERTSEDLWVAGGFPESLLAK
NPRQSLRWRQDFIRTYLERDIPQFGPRIAAEALRRFWVMLAHNQGGVLNAAQFSRNLGVDVKTVTNYLDLLVDLMLVRRL
PPWHGNIGKRLVKSPKVYVRDSGLVHALLGIQDKEGLLAHPVVGQSWECFVVENLLGAGIGAPQGFFYRTGGGAEIDLLL
TWPDEEIWAVEIKRSLSPRPERGFYSACSDLAPAKKYVVYPGAERYRIAPDIEAIPLPQLAAEIHAKAILNVEF

Sequences:

>Translated_394_residues
MISRALYPFLSEALDSSPAVALLGPRQVGKTTLALEIGKVRGALYLDLESEQDLAKLAQPELYLEDHQDRLVIFDEVHRL
PGLFPVLRGFIDKGRRAGLRTGRFLLLGSASLDLLKQSGETLAGRISYLELSPFNILETGERTSEDLWVAGGFPESLLAK
NPRQSLRWRQDFIRTYLERDIPQFGPRIAAEALRRFWVMLAHNQGGVLNAAQFSRNLGVDVKTVTNYLDLLVDLMLVRRL
PPWHGNIGKRLVKSPKVYVRDSGLVHALLGIQDKEGLLAHPVVGQSWECFVVENLLGAGIGAPQGFFYRTGGGAEIDLLL
TWPDEEIWAVEIKRSLSPRPERGFYSACSDLAPAKKYVVYPGAERYRIAPDIEAIPLPQLAAEIHAKAILNVEF
>Mature_394_residues
MISRALYPFLSEALDSSPAVALLGPRQVGKTTLALEIGKVRGALYLDLESEQDLAKLAQPELYLEDHQDRLVIFDEVHRL
PGLFPVLRGFIDKGRRAGLRTGRFLLLGSASLDLLKQSGETLAGRISYLELSPFNILETGERTSEDLWVAGGFPESLLAK
NPRQSLRWRQDFIRTYLERDIPQFGPRIAAEALRRFWVMLAHNQGGVLNAAQFSRNLGVDVKTVTNYLDLLVDLMLVRRL
PPWHGNIGKRLVKSPKVYVRDSGLVHALLGIQDKEGLLAHPVVGQSWECFVVENLLGAGIGAPQGFFYRTGGGAEIDLLL
TWPDEEIWAVEIKRSLSPRPERGFYSACSDLAPAKKYVVYPGAERYRIAPDIEAIPLPQLAAEIHAKAILNVEF

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 43897; Mature: 43897

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRALYPFLSEALDSSPAVALLGPRQVGKTTLALEIGKVRGALYLDLESEQDLAKLAQP
CCCHHHHHHHHHHHCCCCCEEEECCHHHCCEEEEEEEECCCCEEEEEECCCHHHHHHCCC
ELYLEDHQDRLVIFDEVHRLPGLFPVLRGFIDKGRRAGLRTGRFLLLGSASLDLLKQSGE
CEEEECCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCC
TLAGRISYLELSPFNILETGERTSEDLWVAGGFPESLLAKNPRQSLRWRQDFIRTYLERD
CCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHC
IPQFGPRIAAEALRRFWVMLAHNQGGVLNAAQFSRNLGVDVKTVTNYLDLLVDLMLVRRL
CHHCCHHHHHHHHHHHHHHEECCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PPWHGNIGKRLVKSPKVYVRDSGLVHALLGIQDKEGLLAHPVVGQSWECFVVENLLGAGI
CCCCCCHHHHHHCCCCEEEECCCCEEHHHCCCCCCCCEECCCCCCCCCCEEHHHHHHCCC
GAPQGFFYRTGGGAEIDLLLTWPDEEIWAVEIKRSLSPRPERGFYSACSDLAPAKKYVVY
CCCCCCEEECCCCCEEEEEEECCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCCCCEEEEC
PGAERYRIAPDIEAIPLPQLAAEIHAKAILNVEF
CCCCCEEECCCCCCCCCHHHHHHHHHHEEEEECC
>Mature Secondary Structure
MISRALYPFLSEALDSSPAVALLGPRQVGKTTLALEIGKVRGALYLDLESEQDLAKLAQP
CCCHHHHHHHHHHHCCCCCEEEECCHHHCCEEEEEEEECCCCEEEEEECCCHHHHHHCCC
ELYLEDHQDRLVIFDEVHRLPGLFPVLRGFIDKGRRAGLRTGRFLLLGSASLDLLKQSGE
CEEEECCCCCEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCC
TLAGRISYLELSPFNILETGERTSEDLWVAGGFPESLLAKNPRQSLRWRQDFIRTYLERD
CCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHC
IPQFGPRIAAEALRRFWVMLAHNQGGVLNAAQFSRNLGVDVKTVTNYLDLLVDLMLVRRL
CHHCCHHHHHHHHHHHHHHEECCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PPWHGNIGKRLVKSPKVYVRDSGLVHALLGIQDKEGLLAHPVVGQSWECFVVENLLGAGI
CCCCCCHHHHHHCCCCEEEECCCCEEHHHCCCCCCCCEECCCCCCCCCCEEHHHHHHCCC
GAPQGFFYRTGGGAEIDLLLTWPDEEIWAVEIKRSLSPRPERGFYSACSDLAPAKKYVVY
CCCCCCEEECCCCCEEEEEEECCCCCEEEEEEHHCCCCCCCCCHHHHHHHCCCCCEEEEC
PGAERYRIAPDIEAIPLPQLAAEIHAKAILNVEF
CCCCCEEECCCCCCCCCHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]