Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222545
Identifier: 78222545
GI number: 78222545
Start: 1489652
End: 1490641
Strand: Direct
Name: 78222545
Synonym: Gmet_1332
Alternate gene names: NA
Gene position: 1489652-1490641 (Clockwise)
Preceding gene: 78222544
Following gene: 78222546
Centisome position: 37.27
GC content: 33.23
Gene sequence:
>990_bases ATGAAGGTTATCGTTAATTTATATCATATAAAATCAACTAATGGACTTTATTTCTATGCTCTTGATTATATCAAACAGTT AGATGGTAGAATATTAAAAATACTTGTCAGGCCTAAGCTGTACGAGCATATAATTAATACTTTTCCAGCTCTTACAGTAA AAATATGTAGTTGGGTAAGCTTGGTGAGAGAGTTGTTTTCAGCAGATGAAACTAATATGCTGATCTATACTCCAACGCCA CACCCGATGCCTTTTTTAAACAATCAGTTAATTGTAATGCACGATTTTTATCCGTTTAATTATGGTAAGTATTCAACCTT AAAGAAACTACTTTTAAAAATATCACTAGCAAGTTCAAACTGTCGCGTTGCGTATATTAATAAATCTGAAATGCTTCCAT CCATACTAAGCATGGGCATTGAGGAGAAAAGATGTTTGTTTGCACCGAATAGATTTCCATCTAAATTGGATATTGAAACT AGATCTAACTATAAACGGGGGGCAATTCTAAAAGTAGCGCTTGTGGGTACGGATTCACCCAAAAAAAATTACGATGAACT ATTTCATATGATTGTAGATTATAATGTAACTGATAAATTCATTTTTTATATATATGGACATGAAAACAAGTACTATCACG ATCTTTGCGCTGATTTTAAATCAATAAATATCTCGATCATTAATAGTGATACTGTGACGCTAGAGCAGTTTTTTGTAAAC ATCGATATTCTTGTTTCTGTTGCTAACCATGAAGGTTTTGGTCGCCCAATAGCCGTTGCTTTATTGCTAGGTGTTCCTTG TTTTCTGCTTGAACGTAAAGTATTTAAGGAGTTTTTTGATCCTGGCGCTATTTTCTATGAAACAGTATCCGAGATGGTGC TTGAGATGATATCTTATACAACAAAGGAACTACCTGAAGTTAATTTTCTACCTTCGTCTGAATATATTATGGCTTACGAG AATGCACTTGCTGTACTATCCCAAAATTAA
Upstream 100 bases:
>100_bases ATGAGCTATCAAATGCATATTTAAAAATATCTGAATTATAGGCGAAATTATTAATATCTGCTTTGCAAATGAGTGCAAAC TTTATACTGAGTAGGTTATA
Downstream 100 bases:
>100_bases CATGTTGCATTACTGCTGCCTCAGAAAAGCATACGGTTTTAAATCGATCAAGTGCCTACAACGGCTCTATATCATACACT TGGCGAATTGCCGGAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKVIVNLYHIKSTNGLYFYALDYIKQLDGRILKILVRPKLYEHIINTFPALTVKICSWVSLVRELFSADETNMLIYTPTP HPMPFLNNQLIVMHDFYPFNYGKYSTLKKLLLKISLASSNCRVAYINKSEMLPSILSMGIEEKRCLFAPNRFPSKLDIET RSNYKRGAILKVALVGTDSPKKNYDELFHMIVDYNVTDKFIFYIYGHENKYYHDLCADFKSINISIINSDTVTLEQFFVN IDILVSVANHEGFGRPIAVALLLGVPCFLLERKVFKEFFDPGAIFYETVSEMVLEMISYTTKELPEVNFLPSSEYIMAYE NALAVLSQN
Sequences:
>Translated_329_residues MKVIVNLYHIKSTNGLYFYALDYIKQLDGRILKILVRPKLYEHIINTFPALTVKICSWVSLVRELFSADETNMLIYTPTP HPMPFLNNQLIVMHDFYPFNYGKYSTLKKLLLKISLASSNCRVAYINKSEMLPSILSMGIEEKRCLFAPNRFPSKLDIET RSNYKRGAILKVALVGTDSPKKNYDELFHMIVDYNVTDKFIFYIYGHENKYYHDLCADFKSINISIINSDTVTLEQFFVN IDILVSVANHEGFGRPIAVALLLGVPCFLLERKVFKEFFDPGAIFYETVSEMVLEMISYTTKELPEVNFLPSSEYIMAYE NALAVLSQN >Mature_329_residues MKVIVNLYHIKSTNGLYFYALDYIKQLDGRILKILVRPKLYEHIINTFPALTVKICSWVSLVRELFSADETNMLIYTPTP HPMPFLNNQLIVMHDFYPFNYGKYSTLKKLLLKISLASSNCRVAYINKSEMLPSILSMGIEEKRCLFAPNRFPSKLDIET RSNYKRGAILKVALVGTDSPKKNYDELFHMIVDYNVTDKFIFYIYGHENKYYHDLCADFKSINISIINSDTVTLEQFFVN IDILVSVANHEGFGRPIAVALLLGVPCFLLERKVFKEFFDPGAIFYETVSEMVLEMISYTTKELPEVNFLPSSEYIMAYE NALAVLSQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37959; Mature: 37959
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVIVNLYHIKSTNGLYFYALDYIKQLDGRILKILVRPKLYEHIINTFPALTVKICSWVS CEEEEEEEEEECCCCEEEEHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LVRELFSADETNMLIYTPTPHPMPFLNNQLIVMHDFYPFNYGKYSTLKKLLLKISLASSN HHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHEEECCCC CRVAYINKSEMLPSILSMGIEEKRCLFAPNRFPSKLDIETRSNYKRGAILKVALVGTDSP CEEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEECCCC KKNYDELFHMIVDYNVTDKFIFYIYGHENKYYHDLCADFKSINISIINSDTVTLEQFFVN CCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCHHHEEEEEEECCCEEEEHHHEE IDILVSVANHEGFGRPIAVALLLGVPCFLLERKVFKEFFDPGAIFYETVSEMVLEMISYT EEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TKELPEVNFLPSSEYIMAYENALAVLSQN HHHCCCCCCCCCCCEEEEEHHEEEEEECC >Mature Secondary Structure MKVIVNLYHIKSTNGLYFYALDYIKQLDGRILKILVRPKLYEHIINTFPALTVKICSWVS CEEEEEEEEEECCCCEEEEHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH LVRELFSADETNMLIYTPTPHPMPFLNNQLIVMHDFYPFNYGKYSTLKKLLLKISLASSN HHHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHEEECCCC CRVAYINKSEMLPSILSMGIEEKRCLFAPNRFPSKLDIETRSNYKRGAILKVALVGTDSP CEEEEECHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEECCCC KKNYDELFHMIVDYNVTDKFIFYIYGHENKYYHDLCADFKSINISIINSDTVTLEQFFVN CCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCHHHEEEEEEECCCEEEEHHHEE IDILVSVANHEGFGRPIAVALLLGVPCFLLERKVFKEFFDPGAIFYETVSEMVLEMISYT EEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TKELPEVNFLPSSEYIMAYENALAVLSQN HHHCCCCCCCCCCCEEEEEHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA