Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222544
Identifier: 78222544
GI number: 78222544
Start: 1488513
End: 1489592
Strand: Direct
Name: 78222544
Synonym: Gmet_1331
Alternate gene names: NA
Gene position: 1488513-1489592 (Clockwise)
Preceding gene: 78222543
Following gene: 78222545
Centisome position: 37.24
GC content: 32.69
Gene sequence:
>1080_bases TTGATTCTGATCTCAGAGCCTTTTATTTATTCAACTAAACTATGGGACAGCAGTGAGATGAAAAACATATTAATTATAAC TGGGGTATTGCCCCCCAAAGTTTGTGGTGTTGGTGATTATACAAAAAACTTACTAGACACTGAAATAGGTAAATTATGGT CACCTTATGTCGCAGAATCTTGGAGATTTAGAAAACTATCATTCATACTTAAATCGATTGATCAAAGAAAGCCAGACGTA ATATTTATGCAATATCCAGCCGAGGGTTATGGGTGGTCACTTGTCCCTCATATGCTTTTAATTTACTATGTATTTATAAA AAAAATAAAATTCATTACTGTATTGCATGAATATTCAAGTCTTTCATGGAAAAGTCGTTTTTTTATCAGGAACATTCTTT CTAAATCGTCACAGCTTATATTTACTACAAACTTTGAGTTGAATAACTTAGCTAAACATGTTCCAGGCATATTATCAAAA GCAAATGTATTACCGATTCTTTCCAATATTCCTAACCCAAAAGAAATAAAACAAATTTCAGATAGATCGATAGATATTCT ATACTTTGGTCATATTCGTCCCAATAAAGGTATCGAAGATTTCCTTAGAGTTATATGCTCGAGCAAAATAGTAAACAAAA ATCTAAGTATTAAGTTAGTTGGGCAAATTCCAAAAGGCTATGAAAATTATATAAAATCGCTTCAGGCTATTTATCCTCAA GTTATGAACATCACTACTTTAAATGCAGATCTTGACTTGGTTCATACCATGCTTGGTGAAGCTAAAATTTGTTTTCTTCC TTATCCAGATGGTATTTCAGAACGACGTGGATCATTTTTGGCAGCAATTCAACATGGATCTGTAGTGGCTTCATACGTTG GGACATGGACTCCTAGCGGATTAACAAGTGCATTCATTCCACTGGAAAGAGGTCATGAGGCTGAAAAGATTTTATATTTC CTATCAAACAATGAATTGTTAACTAGTCAACAACTTAATTCAATTTCCTACCATAATGAATCTGGGATCACAAATTGGAA TGAGCTATCAAATGCATATTTAAAAATATCTGAATTATAG
Upstream 100 bases:
>100_bases TCGTATGCATCCTACGATTCCAATCTTTCAGTGTTCCCAGAATTGTTTAGCCCATATAGGAGTGTTTTATTTTAGCAGGT TGTCGAAAAACTAAACCGCT
Downstream 100 bases:
>100_bases GCGAAATTATTAATATCTGCTTTGCAAATGAGTGCAAACTTTATACTGAGTAGGTTATAATGAAGGTTATCGTTAATTTA TATCATATAAAATCAACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MILISEPFIYSTKLWDSSEMKNILIITGVLPPKVCGVGDYTKNLLDTEIGKLWSPYVAESWRFRKLSFILKSIDQRKPDV IFMQYPAEGYGWSLVPHMLLIYYVFIKKIKFITVLHEYSSLSWKSRFFIRNILSKSSQLIFTTNFELNNLAKHVPGILSK ANVLPILSNIPNPKEIKQISDRSIDILYFGHIRPNKGIEDFLRVICSSKIVNKNLSIKLVGQIPKGYENYIKSLQAIYPQ VMNITTLNADLDLVHTMLGEAKICFLPYPDGISERRGSFLAAIQHGSVVASYVGTWTPSGLTSAFIPLERGHEAEKILYF LSNNELLTSQQLNSISYHNESGITNWNELSNAYLKISEL
Sequences:
>Translated_359_residues MILISEPFIYSTKLWDSSEMKNILIITGVLPPKVCGVGDYTKNLLDTEIGKLWSPYVAESWRFRKLSFILKSIDQRKPDV IFMQYPAEGYGWSLVPHMLLIYYVFIKKIKFITVLHEYSSLSWKSRFFIRNILSKSSQLIFTTNFELNNLAKHVPGILSK ANVLPILSNIPNPKEIKQISDRSIDILYFGHIRPNKGIEDFLRVICSSKIVNKNLSIKLVGQIPKGYENYIKSLQAIYPQ VMNITTLNADLDLVHTMLGEAKICFLPYPDGISERRGSFLAAIQHGSVVASYVGTWTPSGLTSAFIPLERGHEAEKILYF LSNNELLTSQQLNSISYHNESGITNWNELSNAYLKISEL >Mature_359_residues MILISEPFIYSTKLWDSSEMKNILIITGVLPPKVCGVGDYTKNLLDTEIGKLWSPYVAESWRFRKLSFILKSIDQRKPDV IFMQYPAEGYGWSLVPHMLLIYYVFIKKIKFITVLHEYSSLSWKSRFFIRNILSKSSQLIFTTNFELNNLAKHVPGILSK ANVLPILSNIPNPKEIKQISDRSIDILYFGHIRPNKGIEDFLRVICSSKIVNKNLSIKLVGQIPKGYENYIKSLQAIYPQ VMNITTLNADLDLVHTMLGEAKICFLPYPDGISERRGSFLAAIQHGSVVASYVGTWTPSGLTSAFIPLERGHEAEKILYF LSNNELLTSQQLNSISYHNESGITNWNELSNAYLKISEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40877; Mature: 40877
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILISEPFIYSTKLWDSSEMKNILIITGVLPPKVCGVGDYTKNLLDTEIGKLWSPYVAES CEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCC WRFRKLSFILKSIDQRKPDVIFMQYPAEGYGWSLVPHMLLIYYVFIKKIKFITVLHEYSS HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSWKSRFFIRNILSKSSQLIFTTNFELNNLAKHVPGILSKANVLPILSNIPNPKEIKQIS CCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCHHHHCCCCHHHHHCCCCHHHHHHHC DRSIDILYFGHIRPNKGIEDFLRVICSSKIVNKNLSIKLVGQIPKGYENYIKSLQAIYPQ CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH VMNITTLNADLDLVHTMLGEAKICFLPYPDGISERRGSFLAAIQHGSVVASYVGTWTPSG HHEEEEECCCHHHHHHHHCCCEEEEEECCCCCHHHCCCEEEEEECCCCHHHHHCCCCCCC LTSAFIPLERGHEAEKILYFLSNNELLTSQQLNSISYHNESGITNWNELSNAYLKISEL CHHEECCHHCCCCHHHEEEEECCCCEEHHHHHHHCCCCCCCCCCCHHHHCCCEEEEECC >Mature Secondary Structure MILISEPFIYSTKLWDSSEMKNILIITGVLPPKVCGVGDYTKNLLDTEIGKLWSPYVAES CEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCC WRFRKLSFILKSIDQRKPDVIFMQYPAEGYGWSLVPHMLLIYYVFIKKIKFITVLHEYSS HHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC LSWKSRFFIRNILSKSSQLIFTTNFELNNLAKHVPGILSKANVLPILSNIPNPKEIKQIS CCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCHHHHCCCCHHHHHCCCCHHHHHHHC DRSIDILYFGHIRPNKGIEDFLRVICSSKIVNKNLSIKLVGQIPKGYENYIKSLQAIYPQ CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH VMNITTLNADLDLVHTMLGEAKICFLPYPDGISERRGSFLAAIQHGSVVASYVGTWTPSG HHEEEEECCCHHHHHHHHCCCEEEEEECCCCCHHHCCCEEEEEECCCCHHHHHCCCCCCC LTSAFIPLERGHEAEKILYFLSNNELLTSQQLNSISYHNESGITNWNELSNAYLKISEL CHHEECCHHCCCCHHHEEEEECCCCEEHHHHHHHCCCCCCCCCCCHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA