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The map label for this gene is yfnF [H]

Identifier: 78222542

GI number: 78222542

Start: 1485942

End: 1487294

Strand: Direct

Name: yfnF [H]

Synonym: Gmet_1329

Alternate gene names: 78222542

Gene position: 1485942-1487294 (Clockwise)

Preceding gene: 78222541

Following gene: 78222543

Centisome position: 37.17

GC content: 36.29

Gene sequence:

>1353_bases
TTGGCATCAAATAGAAGGTTGAATCCAGCTATGGTTATTAAAAAAATTATATTTACTATAGTTGCTCGTAATTATTATGG
TCTTGCACAGGTGTTGCGGCAATCTATTATCAAATACAACGATGACATAACATTCTATGCATTTATTGCTGATGGTATTC
CTAGTGATAATCGTGCACTGTTCAGTGCTGATGCTATTGATGTAAATGTAGTAATGCAGCACTTTGTTGCTCCTGAAAAG
TTACAGGAGATGGCTTTTAAATACAACCTTACTGAATACTGTACTGCTATTAAACCGTTCTGTTTTGAGTACCTTTTTAA
CCAAACAGATGTTGATCAAATTATTTATCTAGATCCAGATATTTTAGTTTTTTCTTCACTGACTCCCGTTTTTGATTGTC
TGCAATATGCCTCAATCGTGCTGACCCCACACATTTTATTCCCATCCTCGCTTGAGGGCAAACGGTCTGATAGAGGGATT
ATGGCCACTGGTATTTACAACCTCGGCTTTATAGGGGTTTGTCGATCTAATACTGGATTTACATTTATTAGATGGTGGAG
GCAGCGGCTTCTTGATCAGTGTTTCATTGACAGCCATGACGCTTTATTTACTGACCAAAAATGGGCTGATTTTATTCCAG
GACTCTTCCCTAGCGAAGATGTTTGTGTGCTAAGGCATTCTGGCACAAACATTGCTCCTTGGAATTTTCATGAGAGGGAA
GTATTGATTACAGAAGAGGATAGTCTAGTTGTACGACGTCGACTAGATCCAAATGAATCATTGTTACTTAATAATGAGTG
TAAGCAGGAACCAATTATATTTGTGCATTTCTCTGGTTTTGACTACACTTTGTTATGTAAAGGCGAGGCAGTTCAGTATA
ACATCAGTGGCTTAAGTATATATAATGATCTTCAGTCGTTAATTGATATATATGTGGCATCTATCCAAGCACAAAAGGAA
ACAGTCCTCAAGTTTTTAGGCATGACCTATGGCTACGAATCATTTCAAGATGGCAGCCTAATAATTTCTTTTCATCGTCG
CTTATATCGTTCAGCTGTTGAGTCTGGGCACAATGTCGGCAACCCATTTAGCACTGATAATCATAGTTTTCATAGTCAGC
TTGTTAAACATAAACTTTTATTAAACAGGGCCGTGGTTAAGAAATCTGATCGATCTAATAAATATAATTATCCGAATCTA
AGCGATAAATTGATTATAATTAATAGAATGATGAGAGTAATTAGAAAAATCATTGGTTTAGAAAACTTTCTTTTGTTGTT
GCGTTTAATGCGCCCGTATTCTCGAGCAGAGGCACAACTTCATAATGTTTATCAGAATATGAATAAATTATAG

Upstream 100 bases:

>100_bases
GGTGGGCAGCATGGTTAAATCAGCAGCCAAATAAAGTAGTAATTTGTCCAACAAAATTTATTAACACAGATTCTCCAAAT
CAAACAATTTATCCAGCTGC

Downstream 100 bases:

>100_bases
CAATCTATTATAGTTTCTTGATGTTACCTTGTCGAATTGATAACAATGATAGTTGATTGTATTATATATAATAGTTGGTT
GATATGCATGATATAGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MASNRRLNPAMVIKKIIFTIVARNYYGLAQVLRQSIIKYNDDITFYAFIADGIPSDNRALFSADAIDVNVVMQHFVAPEK
LQEMAFKYNLTEYCTAIKPFCFEYLFNQTDVDQIIYLDPDILVFSSLTPVFDCLQYASIVLTPHILFPSSLEGKRSDRGI
MATGIYNLGFIGVCRSNTGFTFIRWWRQRLLDQCFIDSHDALFTDQKWADFIPGLFPSEDVCVLRHSGTNIAPWNFHERE
VLITEEDSLVVRRRLDPNESLLLNNECKQEPIIFVHFSGFDYTLLCKGEAVQYNISGLSIYNDLQSLIDIYVASIQAQKE
TVLKFLGMTYGYESFQDGSLIISFHRRLYRSAVESGHNVGNPFSTDNHSFHSQLVKHKLLLNRAVVKKSDRSNKYNYPNL
SDKLIIINRMMRVIRKIIGLENFLLLLRLMRPYSRAEAQLHNVYQNMNKL

Sequences:

>Translated_450_residues
MASNRRLNPAMVIKKIIFTIVARNYYGLAQVLRQSIIKYNDDITFYAFIADGIPSDNRALFSADAIDVNVVMQHFVAPEK
LQEMAFKYNLTEYCTAIKPFCFEYLFNQTDVDQIIYLDPDILVFSSLTPVFDCLQYASIVLTPHILFPSSLEGKRSDRGI
MATGIYNLGFIGVCRSNTGFTFIRWWRQRLLDQCFIDSHDALFTDQKWADFIPGLFPSEDVCVLRHSGTNIAPWNFHERE
VLITEEDSLVVRRRLDPNESLLLNNECKQEPIIFVHFSGFDYTLLCKGEAVQYNISGLSIYNDLQSLIDIYVASIQAQKE
TVLKFLGMTYGYESFQDGSLIISFHRRLYRSAVESGHNVGNPFSTDNHSFHSQLVKHKLLLNRAVVKKSDRSNKYNYPNL
SDKLIIINRMMRVIRKIIGLENFLLLLRLMRPYSRAEAQLHNVYQNMNKL
>Mature_449_residues
ASNRRLNPAMVIKKIIFTIVARNYYGLAQVLRQSIIKYNDDITFYAFIADGIPSDNRALFSADAIDVNVVMQHFVAPEKL
QEMAFKYNLTEYCTAIKPFCFEYLFNQTDVDQIIYLDPDILVFSSLTPVFDCLQYASIVLTPHILFPSSLEGKRSDRGIM
ATGIYNLGFIGVCRSNTGFTFIRWWRQRLLDQCFIDSHDALFTDQKWADFIPGLFPSEDVCVLRHSGTNIAPWNFHEREV
LITEEDSLVVRRRLDPNESLLLNNECKQEPIIFVHFSGFDYTLLCKGEAVQYNISGLSIYNDLQSLIDIYVASIQAQKET
VLKFLGMTYGYESFQDGSLIISFHRRLYRSAVESGHNVGNPFSTDNHSFHSQLVKHKLLLNRAVVKKSDRSNKYNYPNLS
DKLIIINRMMRVIRKIIGLENFLLLLRLMRPYSRAEAQLHNVYQNMNKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005069 [H]

Pfam domain/function: PF03407 Nucleotid_trans [H]

EC number: NA

Molecular weight: Translated: 51996; Mature: 51864

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNRRLNPAMVIKKIIFTIVARNYYGLAQVLRQSIIKYNDDITFYAFIADGIPSDNRAL
CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEE
FSADAIDVNVVMQHFVAPEKLQEMAFKYNLTEYCTAIKPFCFEYLFNQTDVDQIIYLDPD
EEECCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
ILVFSSLTPVFDCLQYASIVLTPHILFPSSLEGKRSDRGIMATGIYNLGFIGVCRSNTGF
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCC
TFIRWWRQRLLDQCFIDSHDALFTDQKWADFIPGLFPSEDVCVLRHSGTNIAPWNFHERE
HHHHHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCE
VLITEEDSLVVRRRLDPNESLLLNNECKQEPIIFVHFSGFDYTLLCKGEAVQYNISGLSI
EEEECCCCEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCEEEEECCCEEEEECCCHHH
YNDLQSLIDIYVASIQAQKETVLKFLGMTYGYESFQDGSLIISFHRRLYRSAVESGHNVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
NPFSTDNHSFHSQLVKHKLLLNRAVVKKSDRSNKYNYPNLSDKLIIINRMMRVIRKIIGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
ENFLLLLRLMRPYSRAEAQLHNVYQNMNKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASNRRLNPAMVIKKIIFTIVARNYYGLAQVLRQSIIKYNDDITFYAFIADGIPSDNRAL
CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEE
FSADAIDVNVVMQHFVAPEKLQEMAFKYNLTEYCTAIKPFCFEYLFNQTDVDQIIYLDPD
EEECCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
ILVFSSLTPVFDCLQYASIVLTPHILFPSSLEGKRSDRGIMATGIYNLGFIGVCRSNTGF
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCC
TFIRWWRQRLLDQCFIDSHDALFTDQKWADFIPGLFPSEDVCVLRHSGTNIAPWNFHERE
HHHHHHHHHHHHHHHCCCCCCEECCCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCE
VLITEEDSLVVRRRLDPNESLLLNNECKQEPIIFVHFSGFDYTLLCKGEAVQYNISGLSI
EEEECCCCEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCEEEEECCCEEEEECCCHHH
YNDLQSLIDIYVASIQAQKETVLKFLGMTYGYESFQDGSLIISFHRRLYRSAVESGHNVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
NPFSTDNHSFHSQLVKHKLLLNRAVVKKSDRSNKYNYPNLSDKLIIINRMMRVIRKIIGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCH
ENFLLLLRLMRPYSRAEAQLHNVYQNMNKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]