Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
---|---|
Accession | NC_007517 |
Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is ylaK [H]
Identifier: 78222516
GI number: 78222516
Start: 1464504
End: 1465823
Strand: Direct
Name: ylaK [H]
Synonym: Gmet_1302
Alternate gene names: 78222516
Gene position: 1464504-1465823 (Clockwise)
Preceding gene: 78222515
Following gene: 78222517
Centisome position: 36.64
GC content: 59.7
Gene sequence:
>1320_bases ATGAAAAACTTCGTACTCGATACCAACGTCCTCCTCTACGATCCCCAGGCCATTTTCAAGTTTGAGGAAAACAACATCAT TATCCCCATTACGGTCATCGAAGAGGTGGACCGCTTCAAAAAGGACATGAACGAGACGGGACGCAACGCACGCCAGGTCT CCCGTTATCTGGACGACATGCGCAAGATTGGGTCCCTCTCCTCGGGCATTACCCTCGAGACCGGCGGGATGCTCCGGGTG GAGATGTACGAGGAGAAGATCATGAAGCGGCTTCCTCCCGAGTTGCGCGAGGAGCGGGGGGACAACCGGATACTGGCGGT GGCCGTCAAGATTCTGGAAGAAAACGGTGGCGCGCCCGTCGTGTTCGTCACCAAGGATACGAACTTGCGGATAAAGGCCG ACGCCATCGGCCTCAAGGCCGAGGATTACGAATCGGATAAGGTCGACATCGAAGAGCTCTACCCCGGTTTCACCGAGATC GACGTGGCGGCCGATACCGTTGACCGGTTCCATGGCCAGGGGTGGGTGGAGTTGCCCGGACAGACCTTCTTCCCGAACCA GTGCGTCACCCTGCGGGATGAAGCGAACCCTTCCCATACGGCCCTCGGCAAGTACCGGGTGGGGGATGGGAAAATCACTC CCCTCATCAAGACCGGCAAGGAGGGGGTCTGGAGCATTTTCCCCCGCAACCGCGAGCAGGCCTTTGCCTTCGATCTTCTA CTCGACGACTCCATCAAGCTCGTGACCCTCGTGGGGAAGGCCGGTACAGGCAAGACGCTGCTGGCCATTGCTGCGGGCCT CCACAAGACCGCCGAGGAGAACGTCTTCAACCGCCTTCTCGTCTCCCGGCCCGTCTTTCCCATGGGGCGCGACCTGGGGT TCCTTCCCGGAGATATCGAGGAGAAGCTCGCCCCCTGGATGCAGCCCATCTTCGACAACGTGGAACTTCTCCTGTCGGGG CATGAGGCCGAGAAGCGCCACAGCAAGGGGTATAAGGAGCTCATGGCCATGGGGATCATGGAAATTGAGCCCCTCACCTA CATCCGGGGTCGCTCCATACCGAACCAGTTCATGATCGTCGACGAGGCCCAGAACCTCACGCCTCACGAGATCAAGACCA TCATTACCCGGGCTGGGGAGGGGACCAAGATCGTCCTCACCGGCGACCCCTACCAGATTGACAACCCCTATGTGGATGCC TCGTCCAACGGCCTTACCTACGTGGTGGAGCGCTTCAAGGAGCAGGCAATCGCCGGCCATGTCACCATGACCAAGGGCGA GCGCTCCGACCTGGCGGAACTGGCGGCGAATCTGCTGTAA
Upstream 100 bases:
>100_bases TCGGGCCTTCAGGTGCATGTCATCGAAAAATAGCATCCAACCCGCGGGCGGGCATGTAGCGCATTATCTCTAAACTCCAT CCACGAAAAGAGAAACCTCG
Downstream 100 bases:
>100_bases TGCTCATTCTCACGATCGAAACATCCTGCGACGAAACCGCCGCCGCGGTGGTCCGCGACGGGCGCACGGTGCTGTCGAGC ATCGTTGCGACCCAGGTGAA
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MKNFVLDTNVLLYDPQAIFKFEENNIIIPITVIEEVDRFKKDMNETGRNARQVSRYLDDMRKIGSLSSGITLETGGMLRV EMYEEKIMKRLPPELREERGDNRILAVAVKILEENGGAPVVFVTKDTNLRIKADAIGLKAEDYESDKVDIEELYPGFTEI DVAADTVDRFHGQGWVELPGQTFFPNQCVTLRDEANPSHTALGKYRVGDGKITPLIKTGKEGVWSIFPRNREQAFAFDLL LDDSIKLVTLVGKAGTGKTLLAIAAGLHKTAEENVFNRLLVSRPVFPMGRDLGFLPGDIEEKLAPWMQPIFDNVELLLSG HEAEKRHSKGYKELMAMGIMEIEPLTYIRGRSIPNQFMIVDEAQNLTPHEIKTIITRAGEGTKIVLTGDPYQIDNPYVDA SSNGLTYVVERFKEQAIAGHVTMTKGERSDLAELAANLL
Sequences:
>Translated_439_residues MKNFVLDTNVLLYDPQAIFKFEENNIIIPITVIEEVDRFKKDMNETGRNARQVSRYLDDMRKIGSLSSGITLETGGMLRV EMYEEKIMKRLPPELREERGDNRILAVAVKILEENGGAPVVFVTKDTNLRIKADAIGLKAEDYESDKVDIEELYPGFTEI DVAADTVDRFHGQGWVELPGQTFFPNQCVTLRDEANPSHTALGKYRVGDGKITPLIKTGKEGVWSIFPRNREQAFAFDLL LDDSIKLVTLVGKAGTGKTLLAIAAGLHKTAEENVFNRLLVSRPVFPMGRDLGFLPGDIEEKLAPWMQPIFDNVELLLSG HEAEKRHSKGYKELMAMGIMEIEPLTYIRGRSIPNQFMIVDEAQNLTPHEIKTIITRAGEGTKIVLTGDPYQIDNPYVDA SSNGLTYVVERFKEQAIAGHVTMTKGERSDLAELAANLL >Mature_439_residues MKNFVLDTNVLLYDPQAIFKFEENNIIIPITVIEEVDRFKKDMNETGRNARQVSRYLDDMRKIGSLSSGITLETGGMLRV EMYEEKIMKRLPPELREERGDNRILAVAVKILEENGGAPVVFVTKDTNLRIKADAIGLKAEDYESDKVDIEELYPGFTEI DVAADTVDRFHGQGWVELPGQTFFPNQCVTLRDEANPSHTALGKYRVGDGKITPLIKTGKEGVWSIFPRNREQAFAFDLL LDDSIKLVTLVGKAGTGKTLLAIAAGLHKTAEENVFNRLLVSRPVFPMGRDLGFLPGDIEEKLAPWMQPIFDNVELLLSG HEAEKRHSKGYKELMAMGIMEIEPLTYIRGRSIPNQFMIVDEAQNLTPHEIKTIITRAGEGTKIVLTGDPYQIDNPYVDA SSNGLTYVVERFKEQAIAGHVTMTKGERSDLAELAANLL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=210, Percent_Identity=35.2380952380952, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI145693103, Length=195, Percent_Identity=38.974358974359, Blast_Score=113, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 49141; Mature: 49141
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFVLDTNVLLYDPQAIFKFEENNIIIPITVIEEVDRFKKDMNETGRNARQVSRYLDDM CCCEEEECEEEEECCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RKIGSLSSGITLETGGMLRVEMYEEKIMKRLPPELREERGDNRILAVAVKILEENGGAPV HHHCCCCCCCEEECCCEEEEHHHHHHHHHHCCHHHHHHCCCCCEEEEEEHHHHCCCCCCE VFVTKDTNLRIKADAIGLKAEDYESDKVDIEELYPGFTEIDVAADTVDRFHGQGWVELPG EEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHCCCCEEECCC QTFFPNQCVTLRDEANPSHTALGKYRVGDGKITPLIKTGKEGVWSIFPRNREQAFAFDLL CEECCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEECCCCCEEEECCCCCCCEEEEEEE LDDSIKLVTLVGKAGTGKTLLAIAAGLHKTAEENVFNRLLVSRPVFPMGRDLGFLPGDIE ECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH EKLAPWMQPIFDNVELLLSGHEAEKRHSKGYKELMAMGIMEIEPLTYIRGRSIPNQFMIV HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCEECCCCEECCCCCCCCEEEE DEAQNLTPHEIKTIITRAGEGTKIVLTGDPYQIDNPYVDASSNGLTYVVERFKEQAIAGH ECCCCCCHHHHHHHHHCCCCCCEEEEECCCEECCCCEECCCCCCHHHHHHHHHHHHHHCE VTMTKGERSDLAELAANLL EEEECCCHHHHHHHHHHCC >Mature Secondary Structure MKNFVLDTNVLLYDPQAIFKFEENNIIIPITVIEEVDRFKKDMNETGRNARQVSRYLDDM CCCEEEECEEEEECCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RKIGSLSSGITLETGGMLRVEMYEEKIMKRLPPELREERGDNRILAVAVKILEENGGAPV HHHCCCCCCCEEECCCEEEEHHHHHHHHHHCCHHHHHHCCCCCEEEEEEHHHHCCCCCCE VFVTKDTNLRIKADAIGLKAEDYESDKVDIEELYPGFTEIDVAADTVDRFHGQGWVELPG EEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCEEHHHHHHHHHHCCCCEEECCC QTFFPNQCVTLRDEANPSHTALGKYRVGDGKITPLIKTGKEGVWSIFPRNREQAFAFDLL CEECCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEECCCCCEEEECCCCCCCEEEEEEE LDDSIKLVTLVGKAGTGKTLLAIAAGLHKTAEENVFNRLLVSRPVFPMGRDLGFLPGDIE ECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH EKLAPWMQPIFDNVELLLSGHEAEKRHSKGYKELMAMGIMEIEPLTYIRGRSIPNQFMIV HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCEECCCCEECCCCCCCCEEEE DEAQNLTPHEIKTIITRAGEGTKIVLTGDPYQIDNPYVDASSNGLTYVVERFKEQAIAGH ECCCCCCHHHHHHHHHCCCCCCEEEEECCCEECCCCEECCCCCCHHHHHHHHHHHHHHCE VTMTKGERSDLAELAANLL EEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]