Click here to switch to the map view.

The map label for this gene is cdhE [H]

Identifier: 78222454

GI number: 78222454

Start: 1398085

End: 1399056

Strand: Direct

Name: cdhE [H]

Synonym: Gmet_1240

Alternate gene names: 78222454

Gene position: 1398085-1399056 (Clockwise)

Preceding gene: 78222453

Following gene: 78222455

Centisome position: 34.97

GC content: 63.48

Gene sequence:

>972_bases
GTGCCGATTGTTTCGACGGAGTTCCGGTTTGCCGACCGGCTCGGTGCCTGGAAGGCCCGGTGGGGGATCGGGCGGATGTC
GTACCTGGTGCCACCGGGCCTCTACGCCATTGGCTCCCCCGGCCCCGAAGACCCCGTGGTGGTGACCGCCAACTACAAGA
TGAGCTACGACCTGGTCAGGAGGGAGCTTTCGGGGCGCAACGTCTGGTTCCTCGTCCTCGAAACCTTCGGGATCAATGTC
TGGTGCGCTGCCGGCAAGGGAACCTTCGGCACCGACGAACTGGTCCGTCGCGTGGGAATGGTCAAACTTGCCACGGTGGT
GAAACACCGGGCGCTCATTCTCCCCATTCTCGGCGCTCCCGGCGTGGCCGCCCACCAGGTTGCCCGGCGGAGCGGATTCC
GGGTGCACTACGCCACGATCCGCGCCGCCGACCTCCCCGAGTACCTCGATAACGGCATGGTGACTACACCTGAGATGCGT
CAGCTTACCTTTACCACCCGTGAGCGGCTCGCCCTCACCCCAATCGAACTGGTGACGACCGGGAAGTGGGTCGTGCCGTT
CGTGGCGCTACTCGTCGTTCTGTCGATCGTTCCCGGCGGGCTTTTATCCTCCCCAACCCTTGTCTCTTCGTTGGTTCTCT
TCGTGGGGACCGTGCTGGCCGGAGCCGTTGCTGCTCCGGTACTTCTTCCCTGGCTTCCGGGTAAAAGTTTTGCCGTGAAG
GGGGCAGTGGCCGGTTGCTGCTGGGCAGTTCTGTTTATTGGGGTAGGGAGGGGGGCAACGGGATGGCTTGACGCCATGGC
CCTCTTTCTCACCGTGCCGGCCGTGACCGCCTTCCTGACCCTTAATTTCACCGGCAGCACCCCCTTCACCTCCCGCTCAG
GGGTGAAGAAGGAGATGCGGCTTGGGCTGCCGATGATGGCAGTGTCACTGCTTGCCGGCATTTCCCTCTGGATCGCGGCC
CGTTTCTTCTGA

Upstream 100 bases:

>100_bases
CAAGGAACCGTGCTGAGGCCCCAAGACTCCCGCGGTCAGCGGGACCATCAACGAAAATGTCCCTGGCTTTATCCGCTGGC
ATGAAACTCCTGCCGGCAGG

Downstream 100 bases:

>100_bases
GTCCGCAAGGAGTTGTCTGACGTGAAAGGTTTCTCCTACCTCACAAACGTTGCCTCCCTTGAACTCAACCGCGAAGCCTG
CATCGGCTGTGGCATGTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ACDS complex subunit gamma; ACDS complex methyltransferase; Corrinoid/iron-sulfur component large subunit [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPIVSTEFRFADRLGAWKARWGIGRMSYLVPPGLYAIGSPGPEDPVVVTANYKMSYDLVRRELSGRNVWFLVLETFGINV
WCAAGKGTFGTDELVRRVGMVKLATVVKHRALILPILGAPGVAAHQVARRSGFRVHYATIRAADLPEYLDNGMVTTPEMR
QLTFTTRERLALTPIELVTTGKWVVPFVALLVVLSIVPGGLLSSPTLVSSLVLFVGTVLAGAVAAPVLLPWLPGKSFAVK
GAVAGCCWAVLFIGVGRGATGWLDAMALFLTVPAVTAFLTLNFTGSTPFTSRSGVKKEMRLGLPMMAVSLLAGISLWIAA
RFF

Sequences:

>Translated_323_residues
MPIVSTEFRFADRLGAWKARWGIGRMSYLVPPGLYAIGSPGPEDPVVVTANYKMSYDLVRRELSGRNVWFLVLETFGINV
WCAAGKGTFGTDELVRRVGMVKLATVVKHRALILPILGAPGVAAHQVARRSGFRVHYATIRAADLPEYLDNGMVTTPEMR
QLTFTTRERLALTPIELVTTGKWVVPFVALLVVLSIVPGGLLSSPTLVSSLVLFVGTVLAGAVAAPVLLPWLPGKSFAVK
GAVAGCCWAVLFIGVGRGATGWLDAMALFLTVPAVTAFLTLNFTGSTPFTSRSGVKKEMRLGLPMMAVSLLAGISLWIAA
RFF
>Mature_322_residues
PIVSTEFRFADRLGAWKARWGIGRMSYLVPPGLYAIGSPGPEDPVVVTANYKMSYDLVRRELSGRNVWFLVLETFGINVW
CAAGKGTFGTDELVRRVGMVKLATVVKHRALILPILGAPGVAAHQVARRSGFRVHYATIRAADLPEYLDNGMVTTPEMRQ
LTFTTRERLALTPIELVTTGKWVVPFVALLVVLSIVPGGLLSSPTLVSSLVLFVGTVLAGAVAAPVLLPWLPGKSFAVKG
AVAGCCWAVLFIGVGRGATGWLDAMALFLTVPAVTAFLTLNFTGSTPFTSRSGVKKEMRLGLPMMAVSLLAGISLWIAAR
FF

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]

COG id: COG1456

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016041
- InterPro:   IPR016218
- InterPro:   IPR011005
- InterPro:   IPR007202 [H]

Pfam domain/function: PF03599 CdhD; PF04060 FeS [H]

EC number: NA

Molecular weight: Translated: 34720; Mature: 34588

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVSTEFRFADRLGAWKARWGIGRMSYLVPPGLYAIGSPGPEDPVVVTANYKMSYDLVR
CCCCCCHHHHHHHHCCHHHHCCCCCHHEECCCCCEECCCCCCCCCEEEEECCCHHHHHHH
RELSGRNVWFLVLETFGINVWCAAGKGTFGTDELVRRVGMVKLATVVKHRALILPILGAP
HHHCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
GVAAHQVARRSGFRVHYATIRAADLPEYLDNGMVTTPEMRQLTFTTRERLALTPIELVTT
CHHHHHHHHHCCCEEEEEEEEHHCCHHHHHCCCCCCCHHHHEEHHHHHHEEECCHHEEEC
GKWVVPFVALLVVLSIVPGGLLSSPTLVSSLVLFVGTVLAGAVAAPVLLPWLPGKSFAVK
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH
GAVAGCCWAVLFIGVGRGATGWLDAMALFLTVPAVTAFLTLNFTGSTPFTSRSGVKKEMR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHH
LGLPMMAVSLLAGISLWIAARFF
CCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIVSTEFRFADRLGAWKARWGIGRMSYLVPPGLYAIGSPGPEDPVVVTANYKMSYDLVR
CCCCCHHHHHHHHCCHHHHCCCCCHHEECCCCCEECCCCCCCCCEEEEECCCHHHHHHH
RELSGRNVWFLVLETFGINVWCAAGKGTFGTDELVRRVGMVKLATVVKHRALILPILGAP
HHHCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
GVAAHQVARRSGFRVHYATIRAADLPEYLDNGMVTTPEMRQLTFTTRERLALTPIELVTT
CHHHHHHHHHCCCEEEEEEEEHHCCHHHHHCCCCCCCHHHHEEHHHHHHEEECCHHEEEC
GKWVVPFVALLVVLSIVPGGLLSSPTLVSSLVLFVGTVLAGAVAAPVLLPWLPGKSFAVK
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEH
GAVAGCCWAVLFIGVGRGATGWLDAMALFLTVPAVTAFLTLNFTGSTPFTSRSGVKKEMR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHH
LGLPMMAVSLLAGISLWIAARFF
CCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]