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The map label for this gene is 78222436

Identifier: 78222436

GI number: 78222436

Start: 1377180

End: 1377701

Strand: Direct

Name: 78222436

Synonym: Gmet_1221

Alternate gene names: NA

Gene position: 1377180-1377701 (Clockwise)

Preceding gene: 78222434

Following gene: 78222437

Centisome position: 34.45

GC content: 55.75

Gene sequence:

>522_bases
ATGAGCTTATTTGCGCGCTGGGTCAAACCTGCGTCGCTCTGGAATTACCGATGCTTGTCGCGTTGCAGAAGGAAACCCTG
GGAGTTGCCGTTGAGCTGTGATATCGGGCGAGAACTTAAAAGGTTGAGGAAAGACCGGGAACTGACGCAGAAGGATTTGG
CTGCCCGGGTGGATGGCGGTCTCGACTATACCTATATCGGGAAGATCGAGCGGGGGGAGCAACTCCCGTCCCTCAAAATG
CTCATGGGGTTGAGCGCCGCGCTCGGAGTGCCTGTCAGTCATTTTTTTCAGGAGGAATCGCCGGCAACGAACTCTCCGCT
TCGCATGGCTGACTCCGACGTGAAGTCCATGGAGCTACACAAGGAGTTGCGCCAACTTCATCCTGACGATATCCCCCTGG
TGGTTGACATTGTCAGGGTGCTGAACCGCCATCGAAAGGCCGAACGGAAAAGAGCCTATCAACCTGCAACCGAAGCGCTC
CCTCTTGCAGCAGAGGATGGTCCGTCCTACAGAAAGTCCTGA

Upstream 100 bases:

>100_bases
TGCCGTGTCAATGTGTGACTATTTATCGTATTTGTCAATATTAAAAATGACATATTGTCATATTTTTAATCGCGTTGACA
CCGGGGGGAGAAAGGGGTAT

Downstream 100 bases:

>100_bases
TCTCCATGACCTCTCCCGCATCTCCATCCGGAATCCGCAACAGGGAGCGCCTCGACAAGCTCCTGGTGGACCGGGGGCTC
GTTCAGTCCCGGGAGCGTGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSLFARWVKPASLWNYRCLSRCRRKPWELPLSCDIGRELKRLRKDRELTQKDLAARVDGGLDYTYIGKIERGEQLPSLKM
LMGLSAALGVPVSHFFQEESPATNSPLRMADSDVKSMELHKELRQLHPDDIPLVVDIVRVLNRHRKAERKRAYQPATEAL
PLAAEDGPSYRKS

Sequences:

>Translated_173_residues
MSLFARWVKPASLWNYRCLSRCRRKPWELPLSCDIGRELKRLRKDRELTQKDLAARVDGGLDYTYIGKIERGEQLPSLKM
LMGLSAALGVPVSHFFQEESPATNSPLRMADSDVKSMELHKELRQLHPDDIPLVVDIVRVLNRHRKAERKRAYQPATEAL
PLAAEDGPSYRKS
>Mature_172_residues
SLFARWVKPASLWNYRCLSRCRRKPWELPLSCDIGRELKRLRKDRELTQKDLAARVDGGLDYTYIGKIERGEQLPSLKML
MGLSAALGVPVSHFFQEESPATNSPLRMADSDVKSMELHKELRQLHPDDIPLVVDIVRVLNRHRKAERKRAYQPATEALP
LAAEDGPSYRKS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19866; Mature: 19735

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFARWVKPASLWNYRCLSRCRRKPWELPLSCDIGRELKRLRKDRELTQKDLAARVDGG
CCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LDYTYIGKIERGEQLPSLKMLMGLSAALGVPVSHFFQEESPATNSPLRMADSDVKSMELH
CCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCHHHHHHHHH
KELRQLHPDDIPLVVDIVRVLNRHRKAERKRAYQPATEALPLAAEDGPSYRKS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLFARWVKPASLWNYRCLSRCRRKPWELPLSCDIGRELKRLRKDRELTQKDLAARVDGG
CHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
LDYTYIGKIERGEQLPSLKMLMGLSAALGVPVSHFFQEESPATNSPLRMADSDVKSMELH
CCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCHHHHHHHHH
KELRQLHPDDIPLVVDIVRVLNRHRKAERKRAYQPATEALPLAAEDGPSYRKS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA