Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is dsbC [C]
Identifier: 78222366
GI number: 78222366
Start: 1276759
End: 1277562
Strand: Direct
Name: dsbC [C]
Synonym: Gmet_1150
Alternate gene names: 78222366
Gene position: 1276759-1277562 (Clockwise)
Preceding gene: 78222363
Following gene: 78222367
Centisome position: 31.94
GC content: 56.72
Gene sequence:
>804_bases ATGCGACTTCAACTGTTACGATTCGTGGGGGCACTTTCCCTGACAGCGTGCCTCGCTGCACCGACTGCCTTTGCGGCGCC GAAAGAACAAGCCAAGGGGGAAACCCCTGAGGCGGCCGTAAAACGGCTCTTTCCGAAGCTTCCCGCCACCGCGGTGAAAA AAACCGATATCGACGGGTTCTATGAGGTTGTGGCTGACGGGAATATTCTCTATGTCAACGTGAAGACCGGTCACGTGTTT GTGGGTGACATTTTTACGCGGGAGGGGAAAAACCTGACGGCCGAGGCTCGCACCCGCCTCACTGCCGAGCGCTATAAGCT CATTACCGAGGCCGACAAAGAGAAGGCGGTGAAGGTGGGGAACGGCAAGCATGTGGTCATCGAGATCACCGACCCCGACT GCCCCTTCTGCCGCAAGATGCATGAGTACTGGGGAAACCGTCCCGATGTGACGCGTTATGTTTTCTTCCTCCCCCTTGCG ATGCATAAGGATGCTGAAAAGAAGGCCCGCTATATCCTGGCGGCCGACAATAAGGAACAAGCCCTCTGGGAGGTCTATTC GGGGGAACTCGACAATAACCGCGAGAAGCTGAACAAGCCCTATGACGACAAGGGGTTGCTCTCCGCGCACAAGGCGGTGG TGGCAAAGCTCGGCATCCAGTCGACCCCTGCCTTCTGGGTAGACGGTACTTTTGTGAATGGCGCGAATATCCCGCTTATC GAAAAGATCATCGGCAAGTGCAACCTCCGGCAAGGAACTGCTCCAGGTGAGCCGAAGGTGTGCGATGATGAGCAGGGGAA GTGA
Upstream 100 bases:
>100_bases TATCGGCACAGATGTAACTTGATGAATATGGTATTAAATGGTATCAATTTGCCTGAAGGATATGGTTGCGAAATTACCCA GAAATTCTTTCGGAGGATCT
Downstream 100 bases:
>100_bases CCGGGGAGCAGGTTAACCATCAGTGATCCCGATAAAGGACTATAATCCGACGCGACGCTTTCCCTTGGTGAGCGTCGCTT TTATCGTTCTGAATGTCATC
Product: hypothetical protein
Products: 3-oxo-D 4-steroid; protein with oxidized disulfide bonds [C]
Alternate protein names: ThiolDisulphide Interchange Protein; ThiolDisulfide Interchange Protein DsbC; ThiolDisulfide Interchange Protein; Thiol-Disulfide Interchange Protein DsbC; Disulfide Bond Isomerase DsbC/G-Like Protein; Protein-Disulfide Isomerase-Like Protein; Protein Disulfide-Isomerase; Protein Disulfide Bond Isomerase DsbC/DsbG-Like Protein; ThiolDisulfide Interchange Protein DsbA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRLQLLRFVGALSLTACLAAPTAFAAPKEQAKGETPEAAVKRLFPKLPATAVKKTDIDGFYEVVADGNILYVNVKTGHVF VGDIFTREGKNLTAEARTRLTAERYKLITEADKEKAVKVGNGKHVVIEITDPDCPFCRKMHEYWGNRPDVTRYVFFLPLA MHKDAEKKARYILAADNKEQALWEVYSGELDNNREKLNKPYDDKGLLSAHKAVVAKLGIQSTPAFWVDGTFVNGANIPLI EKIIGKCNLRQGTAPGEPKVCDDEQGK
Sequences:
>Translated_267_residues MRLQLLRFVGALSLTACLAAPTAFAAPKEQAKGETPEAAVKRLFPKLPATAVKKTDIDGFYEVVADGNILYVNVKTGHVF VGDIFTREGKNLTAEARTRLTAERYKLITEADKEKAVKVGNGKHVVIEITDPDCPFCRKMHEYWGNRPDVTRYVFFLPLA MHKDAEKKARYILAADNKEQALWEVYSGELDNNREKLNKPYDDKGLLSAHKAVVAKLGIQSTPAFWVDGTFVNGANIPLI EKIIGKCNLRQGTAPGEPKVCDDEQGK >Mature_267_residues MRLQLLRFVGALSLTACLAAPTAFAAPKEQAKGETPEAAVKRLFPKLPATAVKKTDIDGFYEVVADGNILYVNVKTGHVF VGDIFTREGKNLTAEARTRLTAERYKLITEADKEKAVKVGNGKHVVIEITDPDCPFCRKMHEYWGNRPDVTRYVFFLPLA MHKDAEKKARYILAADNKEQALWEVYSGELDNNREKLNKPYDDKGLLSAHKAVVAKLGIQSTPAFWVDGTFVNGANIPLI EKIIGKCNLRQGTAPGEPKVCDDEQGK
Specific function: Required For Disulfide Bond Formation In Some Periplasmic Proteins. Acts By Transferring Its Disulfide Bond To Other Proteins And Is Reduced In The Process. Dsbc Is Reoxidized By A Yet Uncharacterized Protein. Also Acts As A Disulfide Isomerase. [C]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789260, Length=236, Percent_Identity=27.1186440677966, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29604; Mature: 29604
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLQLLRFVGALSLTACLAAPTAFAAPKEQAKGETPEAAVKRLFPKLPATAVKKTDIDGF CHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCHH YEVVADGNILYVNVKTGHVFVGDIFTREGKNLTAEARTRLTAERYKLITEADKEKAVKVG HHHEECCCEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEC NGKHVVIEITDPDCPFCRKMHEYWGNRPDVTRYVFFLPLAMHKDAEKKARYILAADNKEQ CCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCEEEEEECCCHH ALWEVYSGELDNNREKLNKPYDDKGLLSAHKAVVAKLGIQSTPAFWVDGTFVNGANIPLI HHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCEEECCCCCHHH EKIIGKCNLRQGTAPGEPKVCDDEQGK HHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLQLLRFVGALSLTACLAAPTAFAAPKEQAKGETPEAAVKRLFPKLPATAVKKTDIDGF CHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCHH YEVVADGNILYVNVKTGHVFVGDIFTREGKNLTAEARTRLTAERYKLITEADKEKAVKVG HHHEECCCEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEC NGKHVVIEITDPDCPFCRKMHEYWGNRPDVTRYVFFLPLAMHKDAEKKARYILAADNKEQ CCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCEEEEEECCCHH ALWEVYSGELDNNREKLNKPYDDKGLLSAHKAVVAKLGIQSTPAFWVDGTFVNGANIPLI HHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCEEECCCCCHHH EKIIGKCNLRQGTAPGEPKVCDDEQGK HHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-oxo-D 5-steroid; protein with reduced SH groups [C]
Specific reaction: 3-oxo-D 5-steroid = 3-oxo-D 4-steroid protein with reduced SH groups = protein with oxidized disulfide bonds [C]
General reaction: Isomerases; Intramolecular Oxidoreductases; Transposing S-S Bonds [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA