Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222361
Identifier: 78222361
GI number: 78222361
Start: 1269960
End: 1270922
Strand: Direct
Name: 78222361
Synonym: Gmet_1145
Alternate gene names: NA
Gene position: 1269960-1270922 (Clockwise)
Preceding gene: 78222360
Following gene: 78222362
Centisome position: 31.77
GC content: 63.66
Gene sequence:
>963_bases ATGGGAATGATCCGTATTCATACAACCGCCACGAGCCCTCTTGTTGGCCGGAACAATGCCGCGCTTTCCGGAATCCATTT GACTCCGGATGCGGCAGTTCGCCGGATCGTTCGTGCCGGGGCAATCCAGGCCGGTGACTATGATCAACTCAATGACGGGA AGGAAGCGGGTTCTCCCTCCACCGTCGAAACCTGTCGCGAAAATTCGGCAGGCATTCGCCAGTGCCTCCGGACGCCGGAG AAGCGACTGCAACGCACCCCCGGCAGACCCTCACGTCTTGTCCCCGACCTGGAGGAAGCCACGGTAAACGACCTGGAATC GTACATGCCGATGGCCCGTTCCGACCAGTTGCGACAGCAGATGGTGGATGCAATAGTCTCCGACCGACAGCGCAAAGGGA CCGATTTCAGCATAATGGTGCGCGGCCGACCGGTCTATGACAGTGATCTCTGGCAGCGGGCAATGCAGCAGCTTCCAGCA GAACAGCGGAGTGAGCCCCGAAACGGCATAACCGTGCATCCCCGAACACAGCTCAACCCCGACCCGCTGCCGCTGGTGCT CATCGGCCCGACTGCCTTCGGCCCCCTCATCGACCCATCCAATCGAGACCTTGTCAGAGAGCTGGTGGTCCGTCTCTACA CCGCAATCACCCACGAATACCGGCACGCGACCCAGTGGCAGCGCCCCGCCGAAGCAACGGCCATGGGGAGGGTTCGCCTT GAGGTGGATGCCTTTTTCGCGGATATCGAAAACAGCCGTGCGACGGGGCTGGCAGGCCAGCGGGAGCCGTTTCGCCACAC CTGGGACGAGGCGGTCGGCTGGTGGCGGCAGCTCCGCGCCCCCGCCCTGTGGGGCGCCCTTTCCGATGATGAGCGGCGGG CCTATGCCGAGCGATGCCGGCGGGTGTTCGCCGTTGTCCAGTCGGTCCTGGGGCGCGGCGTGAGTTCTCCCTGCGGTCCC TGA
Upstream 100 bases:
>100_bases GGCTGCCAACCTGGGGATAACCATCGCGGGGTAGGAGGTGAGGGGCTGAAGGTGCACCGAACGGAGCTGTGATAACTCTT GCCATCGGATGGAGATCCCA
Downstream 100 bases:
>100_bases ACAGAAATGGCGATGGCGCAGGCTACCTCAGTATGTGGAGAATAGGGAGGCGAACATGAAAACTTTCGCCGACAAACTGA AAACCAGCCCTGGGCCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MGMIRIHTTATSPLVGRNNAALSGIHLTPDAAVRRIVRAGAIQAGDYDQLNDGKEAGSPSTVETCRENSAGIRQCLRTPE KRLQRTPGRPSRLVPDLEEATVNDLESYMPMARSDQLRQQMVDAIVSDRQRKGTDFSIMVRGRPVYDSDLWQRAMQQLPA EQRSEPRNGITVHPRTQLNPDPLPLVLIGPTAFGPLIDPSNRDLVRELVVRLYTAITHEYRHATQWQRPAEATAMGRVRL EVDAFFADIENSRATGLAGQREPFRHTWDEAVGWWRQLRAPALWGALSDDERRAYAERCRRVFAVVQSVLGRGVSSPCGP
Sequences:
>Translated_320_residues MGMIRIHTTATSPLVGRNNAALSGIHLTPDAAVRRIVRAGAIQAGDYDQLNDGKEAGSPSTVETCRENSAGIRQCLRTPE KRLQRTPGRPSRLVPDLEEATVNDLESYMPMARSDQLRQQMVDAIVSDRQRKGTDFSIMVRGRPVYDSDLWQRAMQQLPA EQRSEPRNGITVHPRTQLNPDPLPLVLIGPTAFGPLIDPSNRDLVRELVVRLYTAITHEYRHATQWQRPAEATAMGRVRL EVDAFFADIENSRATGLAGQREPFRHTWDEAVGWWRQLRAPALWGALSDDERRAYAERCRRVFAVVQSVLGRGVSSPCGP >Mature_319_residues GMIRIHTTATSPLVGRNNAALSGIHLTPDAAVRRIVRAGAIQAGDYDQLNDGKEAGSPSTVETCRENSAGIRQCLRTPEK RLQRTPGRPSRLVPDLEEATVNDLESYMPMARSDQLRQQMVDAIVSDRQRKGTDFSIMVRGRPVYDSDLWQRAMQQLPAE QRSEPRNGITVHPRTQLNPDPLPLVLIGPTAFGPLIDPSNRDLVRELVVRLYTAITHEYRHATQWQRPAEATAMGRVRLE VDAFFADIENSRATGLAGQREPFRHTWDEAVGWWRQLRAPALWGALSDDERRAYAERCRRVFAVVQSVLGRGVSSPCGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35819; Mature: 35688
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMIRIHTTATSPLVGRNNAALSGIHLTPDAAVRRIVRAGAIQAGDYDQLNDGKEAGSPS CCEEEEEECCCCCCCCCCCCCEECEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH TVETCRENSAGIRQCLRTPEKRLQRTPGRPSRLVPDLEEATVNDLESYMPMARSDQLRQQ HHHHHHCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH MVDAIVSDRQRKGTDFSIMVRGRPVYDSDLWQRAMQQLPAEQRSEPRNGITVHPRTQLNP HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCC DPLPLVLIGPTAFGPLIDPSNRDLVRELVVRLYTAITHEYRHATQWQRPAEATAMGRVRL CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEE EVDAFFADIENSRATGLAGQREPFRHTWDEAVGWWRQLRAPALWGALSDDERRAYAERCR EHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH RVFAVVQSVLGRGVSSPCGP HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GMIRIHTTATSPLVGRNNAALSGIHLTPDAAVRRIVRAGAIQAGDYDQLNDGKEAGSPS CEEEEEECCCCCCCCCCCCCEECEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH TVETCRENSAGIRQCLRTPEKRLQRTPGRPSRLVPDLEEATVNDLESYMPMARSDQLRQQ HHHHHHCCCHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH MVDAIVSDRQRKGTDFSIMVRGRPVYDSDLWQRAMQQLPAEQRSEPRNGITVHPRTQLNP HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCC DPLPLVLIGPTAFGPLIDPSNRDLVRELVVRLYTAITHEYRHATQWQRPAEATAMGRVRL CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEE EVDAFFADIENSRATGLAGQREPFRHTWDEAVGWWRQLRAPALWGALSDDERRAYAERCR EHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHH RVFAVVQSVLGRGVSSPCGP HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA