Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
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Accession | NC_007517 |
Length | 3,997,420 |
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The map label for this gene is 78222356
Identifier: 78222356
GI number: 78222356
Start: 1259568
End: 1260743
Strand: Direct
Name: 78222356
Synonym: Gmet_1140
Alternate gene names: NA
Gene position: 1259568-1260743 (Clockwise)
Preceding gene: 78222355
Following gene: 78222357
Centisome position: 31.51
GC content: 68.62
Gene sequence:
>1176_bases ATGGCCGAGAACCCGAAAAGCATATTGACCTTCGAAGGACGTTGCCCCGACTGCGCCGAGCGCCGGGTGGAGCTTCCCCA ACCCCTTCCCGAGCCGGGAGACGATTTCGACTGGCTCGCGCGGGACTACGACAGCTTCCGCCGCCTCATGCTGGAAGAGC TGGCGGGGCGCTTCCCGGAGCGAACCCGCTGGACCGCCGGCGACCTGGAGGTGGTCCTCGTGGAGGCCCTGGCCGCGGTC CTCGACCAGCTTTCAGACACGGCCGACCGGGTGGCGACGGAGGCGTACCTGGAGACGGCGCGGCGTCCCGAGTCGGTGCG GCGGCTCCTCTCCCTTATCGGCTACGACGCCGCCACTGCGGCGGGGCTGGAGGATGACCCCCCCGCCACCCCCGATGGCA AGAGCCGCCACCAGAAGCTGGACGAACTCTGGCGCCGCAACCCTCTGCTCATGGACCCGGCCCGCCTCGAAGGGCCCCGG GCCATCCACACCCAGCGGCGGATGGTGACCGTGGCCGACTACGCCGACCGGCTCACCGACCACCCACTGGTGCTGCGGGC CAGCGGCTGGAGCGCCTGGACCGGCTCGTGGCCCACAGTCCGGGTGGCCACGGTCCTCTGGAACGACCACCCCCTCGATG AGGAGGGGCTCCCCTATCCCGATGACCTGCGGGAGCGGGTTATGGCGTTCCACCAAGAGCACCGGATCTGGGAACCGGTC TGGGAGCCGGAGCCCCCCACCATCCGGACCATCCTCCGCCCCTATCTGGAGGCCTGGCGCATGGCCGGCCAGGAGGTGGT GCTGGAGGACGCAGTTCCCGTGGGGATCAAGATGTTCATCTCCATCCGGGTGCGGGAGAATTACTTCCAGTCCGAAGTCC GCAACGCCGTTCACCAGGCCCTCGGCACCGGGCCGGGGGGCTTCTTCGAGCCTGGGCGCCACGACTTCGGCGAAGACCTC TACGCCAGCGACCTCTTCCAGACCCTCATGTCCCTGAATGGGGTCGAGAACGTCTGCCTCAACCGCTTTAAGCGGTTCGG GGACCAGTACCCGGACCAGACCGACACGGGACGCATCCCGCTCCAGGGGCTCGAAATTGCCGTATGTGACAACGACCCGA GCCGCCCCGAGCGGGGCTACATCAACCTCACCCTGACCGGAGGGCGCCGAGGATGA
Upstream 100 bases:
>100_bases GTGGATGTGCGAGGGGAGGGGGAGAAGCTCCTGATAACCGTTTCCTATGCCCTGGCCGCCATCGGCCACGGCGAGCGGCA CGAATTCCTGGTGTGAGACC
Downstream 100 bases:
>100_bases GCACCGCAACCGACCTTACCCGCTGGAACCGCGCCGGACTAAGCCGCTTCAGGTACGTGGACGGCAACGCCGTCACTTTT CTGGAACTGCTGCGGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MAENPKSILTFEGRCPDCAERRVELPQPLPEPGDDFDWLARDYDSFRRLMLEELAGRFPERTRWTAGDLEVVLVEALAAV LDQLSDTADRVATEAYLETARRPESVRRLLSLIGYDAATAAGLEDDPPATPDGKSRHQKLDELWRRNPLLMDPARLEGPR AIHTQRRMVTVADYADRLTDHPLVLRASGWSAWTGSWPTVRVATVLWNDHPLDEEGLPYPDDLRERVMAFHQEHRIWEPV WEPEPPTIRTILRPYLEAWRMAGQEVVLEDAVPVGIKMFISIRVRENYFQSEVRNAVHQALGTGPGGFFEPGRHDFGEDL YASDLFQTLMSLNGVENVCLNRFKRFGDQYPDQTDTGRIPLQGLEIAVCDNDPSRPERGYINLTLTGGRRG
Sequences:
>Translated_391_residues MAENPKSILTFEGRCPDCAERRVELPQPLPEPGDDFDWLARDYDSFRRLMLEELAGRFPERTRWTAGDLEVVLVEALAAV LDQLSDTADRVATEAYLETARRPESVRRLLSLIGYDAATAAGLEDDPPATPDGKSRHQKLDELWRRNPLLMDPARLEGPR AIHTQRRMVTVADYADRLTDHPLVLRASGWSAWTGSWPTVRVATVLWNDHPLDEEGLPYPDDLRERVMAFHQEHRIWEPV WEPEPPTIRTILRPYLEAWRMAGQEVVLEDAVPVGIKMFISIRVRENYFQSEVRNAVHQALGTGPGGFFEPGRHDFGEDL YASDLFQTLMSLNGVENVCLNRFKRFGDQYPDQTDTGRIPLQGLEIAVCDNDPSRPERGYINLTLTGGRRG >Mature_390_residues AENPKSILTFEGRCPDCAERRVELPQPLPEPGDDFDWLARDYDSFRRLMLEELAGRFPERTRWTAGDLEVVLVEALAAVL DQLSDTADRVATEAYLETARRPESVRRLLSLIGYDAATAAGLEDDPPATPDGKSRHQKLDELWRRNPLLMDPARLEGPRA IHTQRRMVTVADYADRLTDHPLVLRASGWSAWTGSWPTVRVATVLWNDHPLDEEGLPYPDDLRERVMAFHQEHRIWEPVW EPEPPTIRTILRPYLEAWRMAGQEVVLEDAVPVGIKMFISIRVRENYFQSEVRNAVHQALGTGPGGFFEPGRHDFGEDLY ASDLFQTLMSLNGVENVCLNRFKRFGDQYPDQTDTGRIPLQGLEIAVCDNDPSRPERGYINLTLTGGRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44510; Mature: 44378
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAENPKSILTFEGRCPDCAERRVELPQPLPEPGDDFDWLARDYDSFRRLMLEELAGRFPE CCCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC RTRWTAGDLEVVLVEALAAVLDQLSDTADRVATEAYLETARRPESVRRLLSLIGYDAATA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHH AGLEDDPPATPDGKSRHQKLDELWRRNPLLMDPARLEGPRAIHTQRRMVTVADYADRLTD CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECHHHCCCCHHHHHHHHEEHHHHHHHHHCC HPLVLRASGWSAWTGSWPTVRVATVLWNDHPLDEEGLPYPDDLRERVMAFHQEHRIWEPV CCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC WEPEPPTIRTILRPYLEAWRMAGQEVVLEDAVPVGIKMFISIRVRENYFQSEVRNAVHQA CCCCCCHHHHHHHHHHHHHHHCCCCEEHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH LGTGPGGFFEPGRHDFGEDLYASDLFQTLMSLNGVENVCLNRFKRFGDQYPDQTDTGRIP HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC LQGLEIAVCDNDPSRPERGYINLTLTGGRRG CCCCEEEEECCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure AENPKSILTFEGRCPDCAERRVELPQPLPEPGDDFDWLARDYDSFRRLMLEELAGRFPE CCCCCCEEEECCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC RTRWTAGDLEVVLVEALAAVLDQLSDTADRVATEAYLETARRPESVRRLLSLIGYDAATA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHH AGLEDDPPATPDGKSRHQKLDELWRRNPLLMDPARLEGPRAIHTQRRMVTVADYADRLTD CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECHHHCCCCHHHHHHHHEEHHHHHHHHHCC HPLVLRASGWSAWTGSWPTVRVATVLWNDHPLDEEGLPYPDDLRERVMAFHQEHRIWEPV CCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC WEPEPPTIRTILRPYLEAWRMAGQEVVLEDAVPVGIKMFISIRVRENYFQSEVRNAVHQA CCCCCCHHHHHHHHHHHHHHHCCCCEEHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH LGTGPGGFFEPGRHDFGEDLYASDLFQTLMSLNGVENVCLNRFKRFGDQYPDQTDTGRIP HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC LQGLEIAVCDNDPSRPERGYINLTLTGGRRG CCCCEEEEECCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA