Click here to switch to the map view.

The map label for this gene is 78188470

Identifier: 78188470

GI number: 78188470

Start: 575556

End: 575945

Strand: Reverse

Name: 78188470

Synonym: Cag_0492

Alternate gene names: NA

Gene position: 575945-575556 (Counterclockwise)

Preceding gene: 78188476

Following gene: 78188466

Centisome position: 22.39

GC content: 46.92

Gene sequence:

>390_bases
ATGCCTTCTCGACCAAGCAAACGCTTTGTGCTTAATTGGCTAAAAGCGCTGCTGCTCTCACCCGGCATGTTGTTTCCAGC
AACATATCTACTCCTTTACTTCAGCACAACACTCTACCTCAACACCGCACTAAAAAGCGAAGTGATAAAAACCTTGATGC
CGATGGGGCATATAAGCGTTCGTACCGTAACAACCGATATGACGCTTGAGCGCATAACGTTGCACAACGTAACACTGCAA
CCATCAGCCATAGGAGAAAGCAAAAAGCCTCAACACATTCGGCAGCTTACCATTGCCTGCCCAAAACTCATTCCACAGCT
TTTTACCAAACAAGGACGCACGCAAACCATCTGCCAAGTAGAGCAAGCGCTATCTCCTATTGCCCAATAA

Upstream 100 bases:

>100_bases
TAAAGAGAAAATTTTGTATCGTTAAAGCTAAAGCACAAGATTCGTTATTATGGTGCTCTGATAAACGGTAAACTGCTGGA
ATTTTTAAGCCTCAACTCTT

Downstream 100 bases:

>100_bases
ATTCTACGGGTGCTCTAAAAATCGTCGTGAGCGGTTTGAGAGCAAGGCGGACGGAGCGCAAAAACCGGAGTGTACAGATA
GTACATGAGGATTTTAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MPSRPSKRFVLNWLKALLLSPGMLFPATYLLLYFSTTLYLNTALKSEVIKTLMPMGHISVRTVTTDMTLERITLHNVTLQ
PSAIGESKKPQHIRQLTIACPKLIPQLFTKQGRTQTICQVEQALSPIAQ

Sequences:

>Translated_129_residues
MPSRPSKRFVLNWLKALLLSPGMLFPATYLLLYFSTTLYLNTALKSEVIKTLMPMGHISVRTVTTDMTLERITLHNVTLQ
PSAIGESKKPQHIRQLTIACPKLIPQLFTKQGRTQTICQVEQALSPIAQ
>Mature_128_residues
PSRPSKRFVLNWLKALLLSPGMLFPATYLLLYFSTTLYLNTALKSEVIKTLMPMGHISVRTVTTDMTLERITLHNVTLQP
SAIGESKKPQHIRQLTIACPKLIPQLFTKQGRTQTICQVEQALSPIAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14520; Mature: 14388

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRPSKRFVLNWLKALLLSPGMLFPATYLLLYFSTTLYLNTALKSEVIKTLMPMGHISV
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
RTVTTDMTLERITLHNVTLQPSAIGESKKPQHIRQLTIACPKLIPQLFTKQGRTQTICQV
EEEECCHHHHHHHHHCEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EQALSPIAQ
HHHHHHCCC
>Mature Secondary Structure 
PSRPSKRFVLNWLKALLLSPGMLFPATYLLLYFSTTLYLNTALKSEVIKTLMPMGHISV
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
RTVTTDMTLERITLHNVTLQPSAIGESKKPQHIRQLTIACPKLIPQLFTKQGRTQTICQV
EEEECCHHHHHHHHHCEEECCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EQALSPIAQ
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA