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The map label for this gene is 78188456

Identifier: 78188456

GI number: 78188456

Start: 558290

End: 559168

Strand: Reverse

Name: 78188456

Synonym: Cag_0478

Alternate gene names: NA

Gene position: 559168-558290 (Counterclockwise)

Preceding gene: 78188457

Following gene: 78188455

Centisome position: 21.74

GC content: 43.69

Gene sequence:

>879_bases
ATGAAAAACCCGAACGCTTTAAAATGGAGCGACTTAAAAACTGGTATTTTTTTCATTCTTGGTATGGGCTTTGCTGCTTA
TCTCGGTTTAGTAATTAGTAAAAATAGTAGCTTGTTTTCGGGCGTTACCACCGTTAAAATACGATCAAGCGATATTCAAA
GTTTAGCCGAAAACAACTTTGTATCGGTGTCGGGCAAAAAAATTGGCACCGTTTCAAAAATGGAGTTTGTTAAAAGTAAC
GACTCACTCTTTGTGGTGGCAAGCTTGCGTTTGCGCAACGAATATGCCCCCTTGGTAACTAAAGATGCGCGAGCCACTAT
TAAGTCGCTTGGTGTTTTGGGGGATAAGTTTGTTGATATTAAAACCGGCAAAGGAGCACCTGTAAATGAGGGTGATTTTC
TTGCGCTTGATACCGATGAAGGTATGGCAAGCTTAACCACCAATGCCAGCAATGCTTTTGTAAAAATCAACCAATTGCTT
GACCAACTCAACAGCGGCAAGGGTATGGCTGGACGCATTATTTCGGATGAGCAAATGGGCAAAGAGCTTGCTGAAACCGT
TACGGGCTTAAAAACGGCAACCAACGAATTAGCCCAACTTACCGCAAAGGCTTCGCGTGGCAACGGCTTGCTTCCCAAGC
TTTTAAACGACCCCGCAATGGCTAAAAATACGGAAGAGACGCTGGAGCACCTCAATCAAACCTCCCGCAAAACAGAATTA
CTTCTTACCAAGCTGAATGACGATAAAGGCACCTTAGCGCAACTCTCCAGCAATCCTGCGCTTTACAACAACCTCAATCA
AGCCGTCTCTTCGCTTGATTCGCTCTTGACTGATTTAAAAGCTCACCCAAGCCGCTACGTTAAATTCTCAGTTTTTTAA

Upstream 100 bases:

>100_bases
ATGTAACCGATCAACTGCAACACGCTGAGCACCCCTTTATTCGCTCAATTCTCTCTGATAAAATCCTCGAACTTTAACTT
TACTGAAAGGTTTTACAGCC

Downstream 100 bases:

>100_bases
GATGAATGCACCATGCGCTCCTTTTTAACAACATGGAGATATCGGCTTGTTCTTGTGTTGCTGCTCTGCAACACATTGCT
CCCGTGGCAAACCTTTGCAG

Product: VpsC protein

Products: NA

Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain-Containing Protein; VpsC Protein; Mce-Related Protein; Mce Family Protein; Virulence Factor MCE-Like Protein-Related Protein; Mce-Like Protein

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKNPNALKWSDLKTGIFFILGMGFAAYLGLVISKNSSLFSGVTTVKIRSSDIQSLAENNFVSVSGKKIGTVSKMEFVKSN
DSLFVVASLRLRNEYAPLVTKDARATIKSLGVLGDKFVDIKTGKGAPVNEGDFLALDTDEGMASLTTNASNAFVKINQLL
DQLNSGKGMAGRIISDEQMGKELAETVTGLKTATNELAQLTAKASRGNGLLPKLLNDPAMAKNTEETLEHLNQTSRKTEL
LLTKLNDDKGTLAQLSSNPALYNNLNQAVSSLDSLLTDLKAHPSRYVKFSVF

Sequences:

>Translated_292_residues
MKNPNALKWSDLKTGIFFILGMGFAAYLGLVISKNSSLFSGVTTVKIRSSDIQSLAENNFVSVSGKKIGTVSKMEFVKSN
DSLFVVASLRLRNEYAPLVTKDARATIKSLGVLGDKFVDIKTGKGAPVNEGDFLALDTDEGMASLTTNASNAFVKINQLL
DQLNSGKGMAGRIISDEQMGKELAETVTGLKTATNELAQLTAKASRGNGLLPKLLNDPAMAKNTEETLEHLNQTSRKTEL
LLTKLNDDKGTLAQLSSNPALYNNLNQAVSSLDSLLTDLKAHPSRYVKFSVF
>Mature_292_residues
MKNPNALKWSDLKTGIFFILGMGFAAYLGLVISKNSSLFSGVTTVKIRSSDIQSLAENNFVSVSGKKIGTVSKMEFVKSN
DSLFVVASLRLRNEYAPLVTKDARATIKSLGVLGDKFVDIKTGKGAPVNEGDFLALDTDEGMASLTTNASNAFVKINQLL
DQLNSGKGMAGRIISDEQMGKELAETVTGLKTATNELAQLTAKASRGNGLLPKLLNDPAMAKNTEETLEHLNQTSRKTEL
LLTKLNDDKGTLAQLSSNPALYNNLNQAVSSLDSLLTDLKAHPSRYVKFSVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31439; Mature: 31439

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPNALKWSDLKTGIFFILGMGFAAYLGLVISKNSSLFSGVTTVKIRSSDIQSLAENNF
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEEECHHHHHHHHCCE
VSVSGKKIGTVSKMEFVKSNDSLFVVASLRLRNEYAPLVTKDARATIKSLGVLGDKFVDI
EEECCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCEECHHHHHHHHHHCCCCCEEEE
KTGKGAPVNEGDFLALDTDEGMASLTTNASNAFVKINQLLDQLNSGKGMAGRIISDEQMG
ECCCCCCCCCCCEEEEECCCCCEEEECCCCCHHEEHHHHHHHHHCCCCCCCCEECHHHHH
KELAETVTGLKTATNELAQLTAKASRGNGLLPKLLNDPAMAKNTEETLEHLNQTSRKTEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHEE
LLTKLNDDKGTLAQLSSNPALYNNLNQAVSSLDSLLTDLKAHPSRYVKFSVF
EEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MKNPNALKWSDLKTGIFFILGMGFAAYLGLVISKNSSLFSGVTTVKIRSSDIQSLAENNF
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEEEECHHHHHHHHCCE
VSVSGKKIGTVSKMEFVKSNDSLFVVASLRLRNEYAPLVTKDARATIKSLGVLGDKFVDI
EEECCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCEECHHHHHHHHHHCCCCCEEEE
KTGKGAPVNEGDFLALDTDEGMASLTTNASNAFVKINQLLDQLNSGKGMAGRIISDEQMG
ECCCCCCCCCCCEEEEECCCCCEEEECCCCCHHEEHHHHHHHHHCCCCCCCCEECHHHHH
KELAETVTGLKTATNELAQLTAKASRGNGLLPKLLNDPAMAKNTEETLEHLNQTSRKTEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHEE
LLTKLNDDKGTLAQLSSNPALYNNLNQAVSSLDSLLTDLKAHPSRYVKFSVF
EEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA