Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
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Accession | NC_007514 |
Length | 2,572,079 |
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The map label for this gene is 78188345
Identifier: 78188345
GI number: 78188345
Start: 422821
End: 423096
Strand: Reverse
Name: 78188345
Synonym: Cag_0367
Alternate gene names: NA
Gene position: 423096-422821 (Counterclockwise)
Preceding gene: 78188346
Following gene: 78188344
Centisome position: 16.45
GC content: 41.3
Gene sequence:
>276_bases ATGAGTTGGGGCGTTGAAGATCCACAAAAGCGTAAAGATATTCGGGAACTGATGGATATTGCTTCTAAAATTGTGCAAGA AAACCCGAATCATGTAAATGAGGTAAAAAAAAGCCATAATAATTGCTGGATGGAGCAAATATACTTAATCCAGCGCTGCG ACTTTTGTGACCTTGCTCCCGACTGCCCAACACGCGAAGAAAAGGAGTGGCAGGAATATATCAAGGCAAACAACATTATG GTTATAAAGGACTCGTTTCCCACGAATCCCCAATAA
Upstream 100 bases:
>100_bases TTAACACCGTAACGGATTTTGATGTATGGTTAGAGAATAGAAAGAACTAAGTATAAAGCAGCTATTGATTGCAATAATTC TTATAAAAGGAGAACGATAT
Downstream 100 bases:
>100_bases ATGAACAGAGGCGACAACACCACTGCATGGGTAGTAAGAACTATTACGTCATTTTTCACAAAATGAGAACACTTTCACTC CCATCACCTTTCTTTCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSWGVEDPQKRKDIRELMDIASKIVQENPNHVNEVKKSHNNCWMEQIYLIQRCDFCDLAPDCPTREEKEWQEYIKANNIM VIKDSFPTNPQ
Sequences:
>Translated_91_residues MSWGVEDPQKRKDIRELMDIASKIVQENPNHVNEVKKSHNNCWMEQIYLIQRCDFCDLAPDCPTREEKEWQEYIKANNIM VIKDSFPTNPQ >Mature_90_residues SWGVEDPQKRKDIRELMDIASKIVQENPNHVNEVKKSHNNCWMEQIYLIQRCDFCDLAPDCPTREEKEWQEYIKANNIMV IKDSFPTNPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10852; Mature: 10721
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWGVEDPQKRKDIRELMDIASKIVQENPNHVNEVKKSHNNCWMEQIYLIQRCDFCDLAP CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC DCPTREEKEWQEYIKANNIMVIKDSFPTNPQ CCCCCCHHHHHHHHHHCCEEEEECCCCCCCC >Mature Secondary Structure SWGVEDPQKRKDIRELMDIASKIVQENPNHVNEVKKSHNNCWMEQIYLIQRCDFCDLAP CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCC DCPTREEKEWQEYIKANNIMVIKDSFPTNPQ CCCCCCHHHHHHHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA