Click here to switch to the map view.

The map label for this gene is lptG [H]

Identifier: 78188283

GI number: 78188283

Start: 335085

End: 336164

Strand: Reverse

Name: lptG [H]

Synonym: Cag_0302

Alternate gene names: 78188283

Gene position: 336164-335085 (Counterclockwise)

Preceding gene: 78188284

Following gene: 78188282

Centisome position: 13.07

GC content: 46.39

Gene sequence:

>1080_bases
ATGAAAATTCTTGAGCGCTACATTTTTCAACAATTCATTAAAGCGTTTCTCTTTACCGCCTTAGTGTTTGTCTCTCTTTT
CATCATTATTAACATGATTGAAAAGCTCGGGAATTTCATGGATCATCATGTTAGCGCACTTGAAATTGCGCGTTACTATC
TGCTTTCCATTCCCTCCATTTTTCTTGTAACCTCTCCCGTTAGCGCCTTACTTGCCTCTATTTTAGTAGCAGGCAAACTT
GCAACACAAAATGAATTGCCCGCAATTCGCTCGGCAGGCGTGAGTATGCGGCAATTGTTAACCCCCTTTGCATGGGGCGC
GTTGCTTCTCTTTCTGTTTAATTTTTTTAATGCGGGATGGCTTGCTCCCACAACCTATAGCCACAACCGCACCTTTGAGC
AACTCTACCTTGGCAAAAACGCAGGCGATCAAGAAACCCGCAACCTCCATCTATTGGACTCGGGAAACCGTTTTATTTCC
ATTGGGGCATTTAACCCTATTAACGAGAGTTTAAACAACGTTTCAATTGAGCGACTAAGTGGCGCAACCATGATTTCGCG
CATTGATGCCGATTCAATGCACTACAATCGCCGCACCAAGCGCTGGACAATGTGGCGCGTTACCGAACGTTATTTTAGCA
ACGGCTACCAAAGCTTTACAACAAAACCCACCGCCACCATTCGCCTTGCGCTTCGCCCAAAAGCGCTGCATGAAATGCGC
TTGCAACCCGACGAAATAACGCTGCCCCGCCACTATCAATTTCTTCGCGAAAAAGAGGAGGCTGGCTTTTCAGGACTTGA
ACGCTCCGCCGTAAAGTTCCACAATAAAATTGCTATGCCTTTTGCCTCGCTCATTATTACGCTGATTGGCGTGCCTCTTG
CGGCACGTAAAAAACGAGGCGGCATAGCGGCTGAAATAGCTATTACCCTTTTTATTGGCTTTCTCTACCTTGGCATTCAG
CGCACCATTGCCATTGCAGGCTATCAAGGTGTGCTGCCTCCAATTGTTGCCGCTTGGCTTCCAAATCTGCTCTTTCTTGT
TGTGGGCTGGGTGCTCTATAAAAAATCTACCGATTCATAG

Upstream 100 bases:

>100_bases
CCGCAAAAACCTCGATATGGCAACCTTGCGTAAGTACGGCACCGTGCGCGAGCTAACGCTTAAAGAGATTTTTGGCTACT
AAGCTGCACAGGTATGATCC

Downstream 100 bases:

>100_bases
TGTATGAATATGCTGCAACCTCCCGTTGTGGTGTTGATGACCGATTTTGGCATCACCGATACCTTTATTGGGCAAATGAA
AGGAGTTATTCTCTCTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMDHHVSALEIARYYLLSIPSIFLVTSPVSALLASILVAGKL
ATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAGWLAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFIS
IGAFNPINESLNNVSIERLSGATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEMR
LQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLAARKKRGGIAAEIAITLFIGFLYLGIQ
RTIAIAGYQGVLPPIVAAWLPNLLFLVVGWVLYKKSTDS

Sequences:

>Translated_359_residues
MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMDHHVSALEIARYYLLSIPSIFLVTSPVSALLASILVAGKL
ATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAGWLAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFIS
IGAFNPINESLNNVSIERLSGATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEMR
LQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLAARKKRGGIAAEIAITLFIGFLYLGIQ
RTIAIAGYQGVLPPIVAAWLPNLLFLVVGWVLYKKSTDS
>Mature_359_residues
MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMDHHVSALEIARYYLLSIPSIFLVTSPVSALLASILVAGKL
ATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAGWLAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFIS
IGAFNPINESLNNVSIERLSGATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEMR
LQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLAARKKRGGIAAEIAITLFIGFLYLGIQ
RTIAIAGYQGVLPPIVAAWLPNLLFLVVGWVLYKKSTDS

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI87082400, Length=360, Percent_Identity=23.6111111111111, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40597; Mature: 40597

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMDHHVSALEIARYYLLSIPSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FLVTSPVSALLASILVAGKLATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAGW
HHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFISIGAFNPINESLNNVSIERLS
CCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHCCHHHHHC
GATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEMR
CHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECHHHHHHHC
LQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLAARKKRG
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
GIAAEIAITLFIGFLYLGIQRTIAIAGYQGVLPPIVAAWLPNLLFLVVGWVLYKKSTDS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKILERYIFQQFIKAFLFTALVFVSLFIIINMIEKLGNFMDHHVSALEIARYYLLSIPSI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FLVTSPVSALLASILVAGKLATQNELPAIRSAGVSMRQLLTPFAWGALLLFLFNFFNAGW
HHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
LAPTTYSHNRTFEQLYLGKNAGDQETRNLHLLDSGNRFISIGAFNPINESLNNVSIERLS
CCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHCCHHHHHC
GATMISRIDADSMHYNRRTKRWTMWRVTERYFSNGYQSFTTKPTATIRLALRPKALHEMR
CHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECHHHHHHHC
LQPDEITLPRHYQFLREKEEAGFSGLERSAVKFHNKIAMPFASLIITLIGVPLAARKKRG
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
GIAAEIAITLFIGFLYLGIQRTIAIAGYQGVLPPIVAAWLPNLLFLVVGWVLYKKSTDS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]