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The map label for this gene is yrdA [H]

Identifier: 78188230

GI number: 78188230

Start: 280793

End: 281326

Strand: Reverse

Name: yrdA [H]

Synonym: Cag_0249

Alternate gene names: 78188230

Gene position: 281326-280793 (Counterclockwise)

Preceding gene: 78188234

Following gene: 78188229

Centisome position: 10.94

GC content: 50.19

Gene sequence:

>534_bases
ATGCTCATGGGAAAAATTTTGCCTTATAAAGGAATAGTGCCTCAATTACACGAATCGGTCTTTTTAACCGATGGGGCGTT
TGTAATTGGGGATGTGCATATTGGTGCCAACTCCAGCGTCTGGTTTAATGCCGTTGTGCGGGGCGATGTATGCCCTATTC
GCATTGGCGAAAAAACGAATGTGCAGGATAATGTTACGCTCCATGTTACGCACGATACAGGTCCGCTAACCATTGGCAAT
TGCGTTACCATTGGGCATGGTGCCGTGCTTCATGCTTGTACAGTGCAGGATCATGTGCTGATTGGCATGGGCGCTGTGCT
GCTTGATGATTGCGTAGTGGAACCTTGGTCGGTGGTGGCGGCAGGTTCGTTGGTAAAGCAAGGCTTTAGGGTGCCATCGG
GGATGTTGGTGGCAGGCGTACCTGCAAAAGTTATGCGCCCTATTACGGAGGCTGAGCGCCAAACCATTACCGAATCGCCT
GAAAATTATGTGCGCTACGTACAAAATTATCGGGCGGAGGATGCGCAAGGGTAA

Upstream 100 bases:

>100_bases
TGCGGCTGATGCAAGGGCAGGGAATGCCACTTGTGCTTTGTATATTGCGCCCATCGTTTTTGAACGCGAAGTCTATACAA
GAGGCTATCAACTAAATCAC

Downstream 100 bases:

>100_bases
TTCTCTACCACGATTTCATTACATTGCGCCAATTTTTAAAGCTCCCCTTGCCAAAACGCAAGGTTACAAGCCGAGCTTAC
TTGATTTTATTATGAAAACT

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLMGKILPYKGIVPQLHESVFLTDGAFVIGDVHIGANSSVWFNAVVRGDVCPIRIGEKTNVQDNVTLHVTHDTGPLTIGN
CVTIGHGAVLHACTVQDHVLIGMGAVLLDDCVVEPWSVVAAGSLVKQGFRVPSGMLVAGVPAKVMRPITEAERQTITESP
ENYVRYVQNYRAEDAQG

Sequences:

>Translated_177_residues
MLMGKILPYKGIVPQLHESVFLTDGAFVIGDVHIGANSSVWFNAVVRGDVCPIRIGEKTNVQDNVTLHVTHDTGPLTIGN
CVTIGHGAVLHACTVQDHVLIGMGAVLLDDCVVEPWSVVAAGSLVKQGFRVPSGMLVAGVPAKVMRPITEAERQTITESP
ENYVRYVQNYRAEDAQG
>Mature_177_residues
MLMGKILPYKGIVPQLHESVFLTDGAFVIGDVHIGANSSVWFNAVVRGDVCPIRIGEKTNVQDNVTLHVTHDTGPLTIGN
CVTIGHGAVLHACTVQDHVLIGMGAVLLDDCVVEPWSVVAAGSLVKQGFRVPSGMLVAGVPAKVMRPITEAERQTITESP
ENYVRYVQNYRAEDAQG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=177, Percent_Identity=41.8079096045198, Blast_Score=149, Evalue=8e-38,
Organism=Escherichia coli, GI87081681, Length=144, Percent_Identity=36.1111111111111, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI1787667, Length=144, Percent_Identity=36.8055555555556, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18985; Mature: 18985

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMGKILPYKGIVPQLHESVFLTDGAFVIGDVHIGANSSVWFNAVVRGDVCPIRIGEKTN
CCCCCCCCCCCCCHHHCCEEEEECCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCC
VQDNVTLHVTHDTGPLTIGNCVTIGHGAVLHACTVQDHVLIGMGAVLLDDCVVEPWSVVA
CCCCEEEEEEECCCCEEECCEEEECCCCEEEEEECCCEEEEHHHHHHHHHHCCCCHHHHH
AGSLVKQGFRVPSGMLVAGVPAKVMRPITEAERQTITESPENYVRYVQNYRAEDAQG
HHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLMGKILPYKGIVPQLHESVFLTDGAFVIGDVHIGANSSVWFNAVVRGDVCPIRIGEKTN
CCCCCCCCCCCCCHHHCCEEEEECCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCC
VQDNVTLHVTHDTGPLTIGNCVTIGHGAVLHACTVQDHVLIGMGAVLLDDCVVEPWSVVA
CCCCEEEEEEECCCCEEECCEEEECCCCEEEEEECCCEEEEHHHHHHHHHHCCCCHHHHH
AGSLVKQGFRVPSGMLVAGVPAKVMRPITEAERQTITESPENYVRYVQNYRAEDAQG
HHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]