| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is argT [H]
Identifier: 78067200
GI number: 78067200
Start: 2836667
End: 2837449
Strand: Direct
Name: argT [H]
Synonym: Bcep18194_A5731
Alternate gene names: 78067200
Gene position: 2836667-2837449 (Clockwise)
Preceding gene: 78067198
Following gene: 78067201
Centisome position: 76.79
GC content: 63.98
Gene sequence:
>783_bases ATGAAGAAGGCCGCCCTGTGCGCCGCCCTCGCCCTCATGGCGGGTAGCGCCTTCGCGAAGGAGTGGAAGACCGTGCGGAT CGGCGTCGATGCCAGCTACCCGCCGTTCGAGTCGACCGCGCCGAGCGGCGAGATCGTCGGTTTCGACGTCGATCTCACCA AGGAAATCTGCAAGCGAATCAACGTGAATTGCGTGTGGGTGGCGCAGGATCTCGACGGGATCATCCCGGCGCTGAAGGCG AAGAAGTACGACGTCATCGTGTCGTCGCTGACCGTCACGGACAAGCGCCGCGAACAGATCGACTTCTCCGACAAGGTATA CGACGCGCCGGCGCGGATGATCGCGAAGACCGGCTCGCCGCTGCTGCCGACGATCGCATCGCTGAAGGGCAAGCGCGTGG GCGTCGAGCAGGGCTCGACGCAGGAAACCTACGCGAAGGCGTACTGGGAGCCGCAGGGCGTGACGATCATTCCTTACCAG AACCAGGACCAGGTCTATGCCGATCTCGGCTCGGGCCGTCTCGATGCGACGCTGCAGGACGAGCTGCAGGCCGACTACGG CTTCCTGCGCACGCCGCGCGGCAAGGGCTTCGCGTTCGCCGGGCCGGAAGTGAAGGATCCGAAGACGATCGGCGACGGTA CCGCAATCGGCCTGCGCAAGGAAGATACGGACCTGAAGCTCAAGATCAACAAGGCGCTGGCCGACATGCACAAGGACGGC ACGTACGATCGGCTGTCGCACAAGTATTTCGCGTTCAGCGTCTATTCGGCTGCGGCCCGCTGA
Upstream 100 bases:
>100_bases AGAGCGCCGATCGGCGATTTTTGGCCGTCTAGAATACGCCGCGGCGCCCGGTCCGACCGGCCGCGAGCACTCCCGGAAAG TCAGCAACAGAAGGATGGAA
Downstream 100 bases:
>100_bases GCGACGAAAAGAAGAGACAACGGACGCGGGGGCGGCCTCGCATCCGGGCAGTACAGGCAGTCAACCACGCGCCGCCCGCT CCCTTGCCCGCCGCTCGCGC
Product: lysine/arginine/ornithine ABC transporter periplasmic ligand-binding protein
Products: ADP; phosphate; L-ornithine [Cytoplasm]; ADP; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: LAO-binding protein [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKKAALCAALALMAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVNCVWVAQDLDGIIPALKA KKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSPLLPTIASLKGKRVGVEQGSTQETYAKAYWEPQGVTIIPYQ NQDQVYADLGSGRLDATLQDELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLKINKALADMHKDG TYDRLSHKYFAFSVYSAAAR
Sequences:
>Translated_260_residues MKKAALCAALALMAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVNCVWVAQDLDGIIPALKA KKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSPLLPTIASLKGKRVGVEQGSTQETYAKAYWEPQGVTIIPYQ NQDQVYADLGSGRLDATLQDELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLKINKALADMHKDG TYDRLSHKYFAFSVYSAAAR >Mature_260_residues MKKAALCAALALMAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRINVNCVWVAQDLDGIIPALKA KKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSPLLPTIASLKGKRVGVEQGSTQETYAKAYWEPQGVTIIPYQ NQDQVYADLGSGRLDATLQDELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLKINKALADMHKDG TYDRLSHKYFAFSVYSAAAR
Specific function: This periplasmic binding protein is involved in an arginine transport system. ArgT and histidine-binding protein J (hisJ) interact with a common membrane-bound receptor, hisP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788649, Length=260, Percent_Identity=56.1538461538462, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=54.0772532188841, Blast_Score=282, Evalue=1e-77, Organism=Escherichia coli, GI1787085, Length=251, Percent_Identity=37.0517928286853, Blast_Score=165, Evalue=3e-42, Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=34.4, Blast_Score=154, Evalue=4e-39, Organism=Escherichia coli, GI1788228, Length=263, Percent_Identity=31.5589353612167, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787031, Length=248, Percent_Identity=31.8548387096774, Blast_Score=114, Evalue=7e-27,
Paralogues:
None
Copy number: 900 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28438; Mature: 28438
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAALCAALALMAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI CCHHHHHHHHHHHHCHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHC NVNCVWVAQDLDGIIPALKAKKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSP CCCEEEEECCCHHHHHHHCCCCEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCC LLPTIASLKGKRVGVEQGSTQETYAKAYWEPQGVTIIPYQNQDQVYADLGSGRLDATLQD HHHHHHHCCCCEECCCCCCCHHHHHHHEECCCCEEEEEECCCCCEEEECCCCCCCCHHHH ELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLKINKALADMHKDG HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHCCC TYDRLSHKYFAFSVYSAAAR CHHHHCCEEEEEEEEHHHCC >Mature Secondary Structure MKKAALCAALALMAGSAFAKEWKTVRIGVDASYPPFESTAPSGEIVGFDVDLTKEICKRI CCHHHHHHHHHHHHCHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHC NVNCVWVAQDLDGIIPALKAKKYDVIVSSLTVTDKRREQIDFSDKVYDAPARMIAKTGSP CCCEEEEECCCHHHHHHHCCCCEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCC LLPTIASLKGKRVGVEQGSTQETYAKAYWEPQGVTIIPYQNQDQVYADLGSGRLDATLQD HHHHHHHCCCCEECCCCCCCHHHHHHHEECCCCEEEEEECCCCCEEEECCCCCCCCHHHH ELQADYGFLRTPRGKGFAFAGPEVKDPKTIGDGTAIGLRKEDTDLKLKINKALADMHKDG HHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHCCC TYDRLSHKYFAFSVYSAAAR CHHHHCCEEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-ornithine [Periplasm]; H2O; ATP; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [Periplasm] + H2O = ADP + phosphate + L-lysine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 3040734; 9298646 [H]