| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yebQ [H]
Identifier: 78067186
GI number: 78067186
Start: 2822819
End: 2824186
Strand: Direct
Name: yebQ [H]
Synonym: Bcep18194_A5717
Alternate gene names: 78067186
Gene position: 2822819-2824186 (Clockwise)
Preceding gene: 78067185
Following gene: 78067190
Centisome position: 76.41
GC content: 69.01
Gene sequence:
>1368_bases ATGAACGCCGATACCGGCCTGCCGCTTCCGCAACGCTACTGGGCGATCGTCTGCGTCGCACTGGGCATCACGCTCGCCGT GCTCGACGGTGCCATCGCAAACGTCGCGCTGCCGACGATCGCGCGCGACCTGCATGCATCCGATGCCGCATCGATCTGGA TCGTCAACGCGTACCAGCTCGCGGTCACGATCACGCTGCTGCCGCTCGCGTCGCTCGGCGAGCGCATCGGCTACCGCCGC ATCTACATCGCGGGGCTCGCGCTGTTCACCGCGGCGTCGCTCGGCTGCGCACTCGCCGGCTCGCTGCCGATGCTCGCTGT GATGCGCGTGATCCAGGGCTTCGGCGCGGCCGGCATCATGAGCGTCAACGCGGCGCTCGTGCGGATGATCTACCCGTCGT CGATGCTCGGGCGCGGGCTGTCGATCAACGCGATGGTGGTGGCGCTGTCGTCGGCGATCGGGCCGACGGTCGCGTCCGCG ATCCTGTCGTTCGCCTCGTGGCCGTGGCTGTTCGCGGTCAACGTGCCGATCGGCATCGCCGCGGTATTCGGCAGCCTGCG CGCATTGCCGTCCAACCCGCTGCACGATGCGCCGTACGATTTCCCGAGCGCGCTGATGAACGCGTGTGTGTTCGGCCTGC TGATCACGGCCGTGGACGGGCTCGGTCACGGCGAAGGCCATGCGTACGTCGCGGCCGAGCTGGCCATCGCGTTCGTCGTC GGCTACTTCTTCGTGAAGCGCCAGCTGTCGCAGCCGGCGCCGCTGCTGCCGGTCGACCTGATGCGCATCCCGATGTTCGC GCTGTCGATCTATACGTCGATGGCGTCGTTCACGTCGCAGATGCTCGCGTTCGTCGCGCTGCCGTTCTGGCTGCAGAACT CGCTTGGCTTCTCGCAGGTCGAGACGGGCCTGTACATGACGCCGTGGCCGCTCGTGATCGTGTTCGCCGCGCCGCTCGCG GGCGTGCTGTCGGATCGCTATTCGGCCGGCATCCTCGGCGGGATCGGACTCGCGCTGTTCGCGGCCGGGCTGCTGTCGCT CGCGACGATCGGCGCGCACCCGGGCACCGTCGATATCGTGTGGCGGATGGCGCTGTGCGGTGCGGGCTTCGGGTTGTTCC AGTCGCCGAACAACCGCGCAATGCTGTCGTCGGCGCCGCGCGAACGCAGCGGCGGCGCGGGCGGCATGCTGAGCACCGCG CGCCTGACCGGTCAGACGCTCGGCGCCGCGCTCGTCGCATTGATTTTCGGGCTCGTGCCCGATCGCGGGCCGACGATTGC ACTCTATGTCGCCGCGGCATTCGCGGCAGTGGCCGCGGTCGTCAGCATGCTGCGCATCACGTCGCCGCGACCGGACACGG CGACCTGA
Upstream 100 bases:
>100_bases CTGCATCGGCCGGGCCGCTCATCGCCGCCTCCACCCCTCCGCATGGTTGCGCACGCAACCGGCAACCGGGCGCGCGGACA ACCACGCATCTGCTCCCGCC
Downstream 100 bases:
>100_bases CACCACCGCTCGCCGCCCTCGGACCCGCGCGTCATTCGGCGTCGAGCGCGTCCATCACGAAGCGCACGCGCGCCTGCACG CTCTCGCGCGGCAATTCGAC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQLAVTITLLPLASLGERIGYRR IYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIMSVNAALVRMIYPSSMLGRGLSINAMVVALSSAIGPTVASA ILSFASWPWLFAVNVPIGIAAVFGSLRALPSNPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAIAFVV GYFFVKRQLSQPAPLLPVDLMRIPMFALSIYTSMASFTSQMLAFVALPFWLQNSLGFSQVETGLYMTPWPLVIVFAAPLA GVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIVWRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTA RLTGQTLGAALVALIFGLVPDRGPTIALYVAAAFAAVAAVVSMLRITSPRPDTAT
Sequences:
>Translated_455_residues MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQLAVTITLLPLASLGERIGYRR IYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIMSVNAALVRMIYPSSMLGRGLSINAMVVALSSAIGPTVASA ILSFASWPWLFAVNVPIGIAAVFGSLRALPSNPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAIAFVV GYFFVKRQLSQPAPLLPVDLMRIPMFALSIYTSMASFTSQMLAFVALPFWLQNSLGFSQVETGLYMTPWPLVIVFAAPLA GVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIVWRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTA RLTGQTLGAALVALIFGLVPDRGPTIALYVAAAFAAVAAVVSMLRITSPRPDTAT >Mature_455_residues MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQLAVTITLLPLASLGERIGYRR IYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIMSVNAALVRMIYPSSMLGRGLSINAMVVALSSAIGPTVASA ILSFASWPWLFAVNVPIGIAAVFGSLRALPSNPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAIAFVV GYFFVKRQLSQPAPLLPVDLMRIPMFALSIYTSMASFTSQMLAFVALPFWLQNSLGFSQVETGLYMTPWPLVIVFAAPLA GVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIVWRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTA RLTGQTLGAALVALIFGLVPDRGPTIALYVAAAFAAVAAVVSMLRITSPRPDTAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=452, Percent_Identity=59.9557522123894, Blast_Score=514, Evalue=1e-147, Organism=Escherichia coli, GI1790195, Length=294, Percent_Identity=30.952380952381, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1788392, Length=306, Percent_Identity=30.3921568627451, Blast_Score=111, Evalue=8e-26, Organism=Escherichia coli, GI1789042, Length=412, Percent_Identity=24.5145631067961, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1788710, Length=416, Percent_Identity=24.5192307692308, Blast_Score=98, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6325455, Length=157, Percent_Identity=30.5732484076433, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47152; Mature: 47152
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH AVTITLLPLASLGERIGYRRIYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIM HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH SVNAALVRMIYPSSMLGRGLSINAMVVALSSAIGPTVASAILSFASWPWLFAVNVPIGIA HHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH AVFGSLRALPSNPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAIAFVV HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GYFFVKRQLSQPAPLLPVDLMRIPMFALSIYTSMASFTSQMLAFVALPFWLQNSLGFSQV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ETGLYMTPWPLVIVFAAPLAGVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIV CCCCEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH WRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTARLTGQTLGAALVALIFGLVP HHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DRGPTIALYVAAAFAAVAAVVSMLRITSPRPDTAT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNADTGLPLPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLHASDAASIWIVNAYQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH AVTITLLPLASLGERIGYRRIYIAGLALFTAASLGCALAGSLPMLAVMRVIQGFGAAGIM HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH SVNAALVRMIYPSSMLGRGLSINAMVVALSSAIGPTVASAILSFASWPWLFAVNVPIGIA HHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH AVFGSLRALPSNPLHDAPYDFPSALMNACVFGLLITAVDGLGHGEGHAYVAAELAIAFVV HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH GYFFVKRQLSQPAPLLPVDLMRIPMFALSIYTSMASFTSQMLAFVALPFWLQNSLGFSQV HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ETGLYMTPWPLVIVFAAPLAGVLSDRYSAGILGGIGLALFAAGLLSLATIGAHPGTVDIV CCCCEECCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH WRMALCGAGFGLFQSPNNRAMLSSAPRERSGGAGGMLSTARLTGQTLGAALVALIFGLVP HHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC DRGPTIALYVAAAFAAVAAVVSMLRITSPRPDTAT CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]