Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is 78067116
Identifier: 78067116
GI number: 78067116
Start: 2745186
End: 2745755
Strand: Direct
Name: 78067116
Synonym: Bcep18194_A5647
Alternate gene names: NA
Gene position: 2745186-2745755 (Clockwise)
Preceding gene: 78067115
Following gene: 78067119
Centisome position: 74.31
GC content: 67.54
Gene sequence:
>570_bases ATGATGGATACGATCAGGACACTCAACGAAGCCCGCCAGCAGATCCAGCAGTCGATCTTCGATCTGTTCAAGGGGCTGTC ATTCAGCGAACGGCTCGCGCAAGGCGGGCTGATGGCGCTGCAGGCCGTATGCGGCGCATGCCTCGCGTACGTGATCAGCC GCGCGCTGCACACCGAGCAGGCCGTGTGGGCGGCGATCACCGCGATCGCCGTCACGCAGCACAACTACTCGGACACGATG TCGCTGTCGCGCGACCAGTTCGTCGGCGCGATGGTCGGCGGCGTGCTCGGCTTCGCCGGCGCGGCGCTCGGCGGCGACCG CCTCGTCGCGTATGCGATTACCGTCGCGGTCGTGATCGTCTGCTGCTGGTGCCTGAATGTCGGCAGCGCGGCACGGCTCG GCGGCGTGACCGCGACGATCGTGCTGCTGTTTCCGGGCGACGGCCCGCTGTGGGACATTCCGCTGATGCGGCTCGGCGAG GTCACGCTCGGCACCGTGTGTGCGCTGGGCGTGTGCTGGGTGATGTCGAAAATCGAGCGCCGCTGGTTCCGCCACGCGGC GGCAAAGTGA
Upstream 100 bases:
>100_bases TCGAGAACGGCGACTCGGCCGCCGACGAACCGGCCGCCGCATCGCCCGAACAGGCGCGCTGACACCGGCGCGCCGCCGTT ACCCGCTTCTTGGCCAACGC
Downstream 100 bases:
>100_bases CTCGGTGAGCCGGCTGCCCGGCGCGCATCGCGGCATCGCGATCCGTGCCGGGCCGTCGGCCAGGTCAGTCGCCGATCCGC AGCACGATGCCGGAACCGAT
Product: membrane protein-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MMDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYVISRALHTEQAVWAAITAIAVTQHNYSDTM SLSRDQFVGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVCCWCLNVGSAARLGGVTATIVLLFPGDGPLWDIPLMRLGE VTLGTVCALGVCWVMSKIERRWFRHAAAK
Sequences:
>Translated_189_residues MMDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYVISRALHTEQAVWAAITAIAVTQHNYSDTM SLSRDQFVGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVCCWCLNVGSAARLGGVTATIVLLFPGDGPLWDIPLMRLGE VTLGTVCALGVCWVMSKIERRWFRHAAAK >Mature_189_residues MMDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYVISRALHTEQAVWAAITAIAVTQHNYSDTM SLSRDQFVGAMVGGVLGFAGAALGGDRLVAYAITVAVVIVCCWCLNVGSAARLGGVTATIVLLFPGDGPLWDIPLMRLGE VTLGTVCALGVCWVMSKIERRWFRHAAAK
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20194; Mature: 20194
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00457 NA_SOLUT_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYVISRALHTEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVWAAITAIAVTQHNYSDTMSLSRDQFVGAMVGGVLGFAGAALGGDRLVAYAITVAVVIV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CCWCLNVGSAARLGGVTATIVLLFPGDGPLWDIPLMRLGEVTLGTVCALGVCWVMSKIER HHHHHCCCCHHHHCCCEEEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH RWFRHAAAK HHHHHHCCC >Mature Secondary Structure MMDTIRTLNEARQQIQQSIFDLFKGLSFSERLAQGGLMALQAVCGACLAYVISRALHTEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVWAAITAIAVTQHNYSDTMSLSRDQFVGAMVGGVLGFAGAALGGDRLVAYAITVAVVIV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CCWCLNVGSAARLGGVTATIVLLFPGDGPLWDIPLMRLGEVTLGTVCALGVCWVMSKIER HHHHHCCCCHHHHCCCEEEEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH RWFRHAAAK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA