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The map label for this gene is rng [H]

Identifier: 78067097

GI number: 78067097

Start: 2726290

End: 2727759

Strand: Direct

Name: rng [H]

Synonym: Bcep18194_A5628

Alternate gene names: 78067097

Gene position: 2726290-2727759 (Clockwise)

Preceding gene: 78067096

Following gene: 78067098

Centisome position: 73.8

GC content: 65.31

Gene sequence:

>1470_bases
ATGAACGAAGAAATCCTGATTAACCTCACGCCGCAGGAAACGCGGGTTGCACTCGTCCAGCAAGGCGCGGTGCAGGAGCT
TCACGTCGAGCGCACGCTGTCGCGCGGGCGCGTCGGCAACATCTATCTCGGCAAGGTCGTGCGCGTGCTGCCCGGCATGC
AGTCGGCGTTCATCGACATCGGTCTCGAACGCGCGGCATTCCTGCACGTCGCCGACATCTGGCATCCGCGCCTCGCAGGC
GAGCCGCAGTCGGGCACGCCGCACCAGCCGATCGAGAAGATCGTGTTCGAAGGCCAGACGCTGATGGTCCAGGTGATCAA
GGACCCGATCGGCACGAAGGGCGCGCGCCTGTCGACGCAGGTCAGCATCGCGGGCCGCACGCTCGTCTACCTGCCGCAGG
AGCCGCATATCGGCATCTCGCAGAAGATCGAGAGCGAGGCCGAACGCGAGGCCGTGCGCGCGCGCCTGACGGCCGTGATC
CCGGCGGACGAGAAAGGCGGCTACATCGTGCGCACGATCGCCGAAGATGCGACCTCCGACGAACTCGCCGGCGACGTCAC
GTACCTGCGCAAGACGTGGGCGACGATCGTCGCCCAGGCACAGCGGCTGCCGGCGACGAGCCTGCTGTACCAGGATCTCG
ATCTCGCGCAGCGCGTGCTGCGCGATTTCGCGAACGACGACACGACGCGCATCCAGGTCGATTCGCGCGAGACGTACCAG
CGCCTCTCGGAATTCGCGGGCGAGTTCACGCCCGCCGTGAGCCCGAAGCTGCACCACTACACGGGCGAGCGGCCGCTGTT
CGACCTGTACAACATCGAGACGGAGATCCAGCGCGCGCTGTCGCGCCGCGTCGACCTGAAGTCGGGCGGTTACCTGATGA
TCGACCAGACCGAGGCGATGACGACGATCGACGTGAACACCGGCGGCTACGTCGGCGCACGCAACTTCGACGACACGATC
TTCAAGACCAACCTCGAAGCCGCGCATACGATCGCGCGGCAGCTGCGGCTGCGCAACCTCGGCGGGATCATCATCATCGA
CTTCATCGACATGGAGAACGCCGAGCATCGCGACGCGGTGCTGTCCGAGCTGAAGAAGGCGCTGTCGCGCGACCGCACGC
GCGTGACGGTCAACGGCTTCTCGCAGCTCGGGCTCGTCGAGATGACGCGCAAGCGCACGCGCGAATCGCTCGCGCATGTG
CTGTGCGAGCCGTGCCCGACCTGCCAGGGCAAGGGCCAGGTGAAGACATCGCGCACCGTGTGCTACGACATCCTGCGCGA
GATCCTGCGCGAGTCGCGGCAGTTCAACCCGCGCGAATTCCGCGTAATCGCCGCGCAACAGGTGATCGATCTGTTCCTCG
ACGAGGAATCGCAGCATCTCGCGATGTTGATCGACTTCATCGGCAAGCCGGTGTCGCTGCAGGTCGAGTCGAACCTGAGC
CAGGAGCAGTACGATATCGTGCTGATGTAA

Upstream 100 bases:

>100_bases
TCGAGCGAATCGACGGTTCCCATTCAGGTATCATGGGTCTGCCCCTTTTTGAGACTGCCGCGCTGCTACGTGCCGCGCGC
GTCGCCTTCTGAACCGCACC

Downstream 100 bases:

>100_bases
TTATTTTTTCTGTTATAAATCAGTACGTTACTCAAAAATAACCTCGTGATTCGGTAGCTGACCACCCATCTAGCTACCCA
ATCGGTTACCGCTAGTGAGA

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQSGTPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVI
PADEKGGYIVRTIAEDATSDELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM

Sequences:

>Translated_489_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQSGTPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVI
PADEKGGYIVRTIAEDATSDELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
>Mature_489_residues
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQSGTPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVI
PADEKGGYIVRTIAEDATSDELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVLSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPTCQGKGQVKTSRTVCYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=493, Percent_Identity=56.3894523326572, Blast_Score=542, Evalue=1e-155,
Organism=Escherichia coli, GI1787325, Length=458, Percent_Identity=37.7729257641921, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55000; Mature: 55000

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHH
GLERAAFLHVADIWHPRLAGEPQSGTPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPADEKGGYIVRTIAEDATSD
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCH
ELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAM
HHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
EEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
CYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
HHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCC
QEQYDIVLM
CCCCCEEEC
>Mature Secondary Structure
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHH
GLERAAFLHVADIWHPRLAGEPQSGTPHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEE
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPADEKGGYIVRTIAEDATSD
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCCCH
ELAGDVTYLRKTWATIVAQAQRLPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
RLSEFAGEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAM
HHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
EEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
CYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
HHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCC
QEQYDIVLM
CCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]