Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
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Accession | NC_007510 |
Length | 3,694,126 |
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The map label for this gene is ybeB [C]
Identifier: 78067094
GI number: 78067094
Start: 2724655
End: 2725101
Strand: Direct
Name: ybeB [C]
Synonym: Bcep18194_A5625
Alternate gene names: 78067094
Gene position: 2724655-2725101 (Clockwise)
Preceding gene: 78067093
Following gene: 78067095
Centisome position: 73.76
GC content: 65.55
Gene sequence:
>447_bases ATGGATATTCGCAAACTGCAGCGCGTGATCGTCGACGCCCTCGAAGACGTCAAGGCGCAAGACATCAAGGTGTTCAACAC CAGCCACCTGACCGAACTGTTCGACCGCGTGGTCGTCGCTTCGGGCACCTCCAACCGCCAGACCAAGGCACTCGCGTCGA GCGTGCGTGACAAGGTCAAGGAAGCCGGCGGCGACATCGTCAGCTCCGAAGGCGAAGACACCGGCGAATGGGTGCTGGTC GACTGCGGCGACGCGGTCGTGCACATCCTGCAACCGGCCCTGCGCCAGTACTACAACCTCGAGGAAATCTGGGGCGACAA GCCCGTGCGGATGAAGCTCGGCGGCGGCAAGGGCAACGGCTTCGCCCAGGCCAGCGAAGGCGACGACGAAGAAGAGGAAG CCGCGCCCGCACGCCCGGCACGCAAGACGGCCGCCCGCCGCCGTTGA
Upstream 100 bases:
>100_bases ATCGCGCGCCATGCGCAAATGCCCGACGCATCGGCCGAGCATGTGCCGGCCGCCGTATGGGCCTATATTCTTCAACATCG CCTCTACCATTCCTGAATCC
Downstream 100 bases:
>100_bases GCTTCGAGTCGTTACGCATCTCCCGATGAAGCTTTTCATCCTTGCGGTCGGTCACAAGATGCCGGGCTGGATCGCATCCG GCTTCGACGAATACACGAAG
Product: Iojap-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVVVASGTSNRQTKALASSVRDKVKEAGGDIVSSEGEDTGEWVLV DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKGNGFAQASEGDDEEEEAAPARPARKTAARRR
Sequences:
>Translated_148_residues MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVVVASGTSNRQTKALASSVRDKVKEAGGDIVSSEGEDTGEWVLV DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKGNGFAQASEGDDEEEEAAPARPARKTAARRR >Mature_148_residues MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVVVASGTSNRQTKALASSVRDKVKEAGGDIVSSEGEDTGEWVLV DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKGNGFAQASEGDDEEEEAAPARPARKTAARRR
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Iojap family [H]
Homologues:
Organism=Escherichia coli, GI87081768, Length=101, Percent_Identity=32.6732673267327, Blast_Score=77, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004394 [H]
Pfam domain/function: PF02410 DUF143 [H]
EC number: NA
Molecular weight: Translated: 16222; Mature: 16222
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVVVASGTSNRQTKALASSVRDKVK CCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EAGGDIVSSEGEDTGEWVLVDCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKGNG HCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCC FAQASEGDDEEEEAAPARPARKTAARRR CCCCCCCCCCHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVVVASGTSNRQTKALASSVRDKVK CCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EAGGDIVSSEGEDTGEWVLVDCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGGKGNG HCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCCC FAQASEGDDEEEEAAPARPARKTAARRR CCCCCCCCCCHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]