| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is yhhW [C]
Identifier: 78067000
GI number: 78067000
Start: 2625227
End: 2626099
Strand: Direct
Name: yhhW [C]
Synonym: Bcep18194_A5531
Alternate gene names: 78067000
Gene position: 2625227-2626099 (Clockwise)
Preceding gene: 78066998
Following gene: 78067001
Centisome position: 71.06
GC content: 68.96
Gene sequence:
>873_bases ATGACGACCGCTCGCTCGCTTGACCGCACGTACCCCGCACTTCGCACGACCGAAGGCGGCGGCTTCGTGGTTCACCGCCC GTTCCCGACCCGGCTCCTGATGGATTTCGATCCGTTCCTGCTGCTCGACGAAATGGGCCCCGTCGACTACGCACCCGGCG AAGCCAAGGGCGCCCCCGACCATCCGCATCGCGGCTTCGAGACCGTGACCTACGCACTCGACGGGCGCTTTCGCCATCGC GACTCGTCCGGCCATGCCGGCACGCTCGGCCCGGGCGACGTGCAATGGATGACGGCGGGCGCCGGCGTCGTGCACAGCGA AATGCCCGATCCTGAATTCGCGCAGACGGGCGGCCGCTCCCACGGCTTCCAGCTGTGGGTCAACCTGCCGCGCCGCGACA AGCTGATCGCGCCGCGCTACCAGGAGATCCCTGCCGACCGCGTCCCGACCGCGACGTCGCCGGACGGCCGCGCGCGCGTA CGCGTGATCGCCGGCGAAGCGTTCGGCGTCCGCGCCGCGATCGAAACGCGCACACCGATCCTCTACCAGCATTTCACGCT GCAGCCCGGTGCAACGGTCACGCAGACCGTCCCGGCAGGCTATCGTGTGTTCGCCTATCCGATCGACGGAACGGGCCTCT ACGGGCCCGCCAGGCAGGCGGTCGACGCACGGCACATGGTCGTGTACTGCGACGACGGCGACACGGTCACGTTCTCCGCC GGCGACACGCCGCTCGACCTGCTGCTGATCGGCGGCGTGCCGCTCAACGAGCCGATCGTCCGCTACGGCCCGTTCGTGAT GAACACCGAGGAAGAGATCCGGCAGGCGGTCGTCGACTACCAGACCGGTCGCATGGGTCGCATCGAAGCATGA
Upstream 100 bases:
>100_bases AATCCATTGCGAACCGTCGCGAATCGAACGGTAAAACGCCCAATATAATAGCGCTATGTTTCAAAAATAACGCTATTCCG ATCATTTCGAGGGTATCCGC
Downstream 100 bases:
>100_bases CGCCCGGACGGGCGCGCAGGTGCCGCGAAACTGCCCGTTTTGCGTCACAATGACTTCTTGAACCATGTGGCCGCCCGCCA CCAGAAGGAACCCGTCCCCT
Product: Pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPDHPHRGFETVTYALDGRFRHR DSSGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQTGGRSHGFQLWVNLPRRDKLIAPRYQEIPADRVPTATSPDGRARV RVIAGEAFGVRAAIETRTPILYQHFTLQPGATVTQTVPAGYRVFAYPIDGTGLYGPARQAVDARHMVVYCDDGDTVTFSA GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA
Sequences:
>Translated_290_residues MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPDHPHRGFETVTYALDGRFRHR DSSGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQTGGRSHGFQLWVNLPRRDKLIAPRYQEIPADRVPTATSPDGRARV RVIAGEAFGVRAAIETRTPILYQHFTLQPGATVTQTVPAGYRVFAYPIDGTGLYGPARQAVDARHMVVYCDDGDTVTFSA GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA >Mature_289_residues TTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPDHPHRGFETVTYALDGRFRHRD SSGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQTGGRSHGFQLWVNLPRRDKLIAPRYQEIPADRVPTATSPDGRARVR VIAGEAFGVRAAIETRTPILYQHFTLQPGATVTQTVPAGYRVFAYPIDGTGLYGPARQAVDARHMVVYCDDGDTVTFSAG DTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=290, Percent_Identity=42.4137931034483, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI4505823, Length=290, Percent_Identity=42.4137931034483, Blast_Score=226, Evalue=3e-59, Organism=Escherichia coli, GI1789847, Length=105, Percent_Identity=36.1904761904762, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31735; Mature: 31604
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPD CCCHHHHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYALDGRFRHRDSSGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQTGGRS CCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHCCCCC HGFQLWVNLPRRDKLIAPRYQEIPADRVPTATSPDGRARVRVIAGEAFGVRAAIETRTPI CCEEEEEECCCCCCEECCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCE LYQHFTLQPGATVTQTVPAGYRVFAYPIDGTGLYGPARQAVDARHMVVYCDDGDTVTFSA EEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHCCCEEEEEEECCCCEEEEEC GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAKGAPD CCHHHHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYALDGRFRHRDSSGHAGTLGPGDVQWMTAGAGVVHSEMPDPEFAQTGGRS CCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHCCCCC HGFQLWVNLPRRDKLIAPRYQEIPADRVPTATSPDGRARVRVIAGEAFGVRAAIETRTPI CCEEEEEECCCCCCEECCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCE LYQHFTLQPGATVTQTVPAGYRVFAYPIDGTGLYGPARQAVDARHMVVYCDDGDTVTFSA EEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHCCCEEEEEEECCCCEEEEEC GDTPLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]