Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 78066991

GI number: 78066991

Start: 2617448

End: 2618071

Strand: Direct

Name: yqhA [C]

Synonym: Bcep18194_A5522

Alternate gene names: 78066991

Gene position: 2617448-2618071 (Clockwise)

Preceding gene: 78066990

Following gene: 78066992

Centisome position: 70.85

GC content: 64.42

Gene sequence:

>624_bases
ATGTCTGCCCCGCATTCGCCCGGCCGCCCCGCGCGTCGCCCGCTTCGCCCGCTTCCCGCGCTGATTTTCATGAGCCGCTG
GCTCCAGGTTCCGCTTTACCTCGGCCTGATCGTTGCGCAGGCCGTCTATGTGTTCCTGTTCCTGAAGGAAGTCTGGCACC
TGCTGTCGCATGCGACGAGCCTCGACGAAATCAGCGTGATGCTCGCGGTGCTCGGCCTGATCGACGTGGTGATGATCTCG
AACCTGCTGATCATGGTGATCGTCGGCGGCTACGAAACGTTCGTGTCGCGGCTCGGCATCGAGGGCCACCCCGACGAGCC
CGAGTGGCTCGACCACGTGAACGCGGGCGTGCTGAAGGTCAAGCTGTCGATGGCGCTGATCAGCATTTCGTCGATCCACC
TGCTGAAGACGTTCATCAACCCCGACCAGCACACGATGCACGCGATCATGTGGCAGGTGATCATCCACGTGTCGTTCCTG
GTGTCGGCGCTCGTGATGGCGTGGGTCGACCGCCTGACGACGCACACGCACCCGGCCCATTTCCACGAGCAGCACGCCCG
CGACGCGCACGCGCCTGCGGCGAACGAGCCACGCAAGCCGGCCGAAGCAGCCGTCAACGCATAA

Upstream 100 bases:

>100_bases
GGGCCGGCGCGTCACTGCAGTCGCGCTGGCCGACGCGTTACAATAGCGCGCCTTTTCAAGATTACCCCCGATACCTGCGC
ACCGCGCCCGACTTTTCACC

Downstream 100 bases:

>100_bases
ACGCATTCCCCACAGTCCCCACAGAGTCTCAGCCATGACCGTCATCAAACAGGAAGACCTGATCCAGAGCATCGCGGATT
CGCTGCAGTACATCAGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSAPHSPGRPARRPLRPLPALIFMSRWLQVPLYLGLIVAQAVYVFLFLKEVWHLLSHATSLDEISVMLAVLGLIDVVMIS
NLLIMVIVGGYETFVSRLGIEGHPDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFINPDQHTMHAIMWQVIIHVSFL
VSALVMAWVDRLTTHTHPAHFHEQHARDAHAPAANEPRKPAEAAVNA

Sequences:

>Translated_207_residues
MSAPHSPGRPARRPLRPLPALIFMSRWLQVPLYLGLIVAQAVYVFLFLKEVWHLLSHATSLDEISVMLAVLGLIDVVMIS
NLLIMVIVGGYETFVSRLGIEGHPDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFINPDQHTMHAIMWQVIIHVSFL
VSALVMAWVDRLTTHTHPAHFHEQHARDAHAPAANEPRKPAEAAVNA
>Mature_206_residues
SAPHSPGRPARRPLRPLPALIFMSRWLQVPLYLGLIVAQAVYVFLFLKEVWHLLSHATSLDEISVMLAVLGLIDVVMISN
LLIMVIVGGYETFVSRLGIEGHPDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFINPDQHTMHAIMWQVIIHVSFLV
SALVMAWVDRLTTHTHPAHFHEQHARDAHAPAANEPRKPAEAAVNA

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=162, Percent_Identity=39.5061728395062, Blast_Score=126, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 23074; Mature: 22942

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPHSPGRPARRPLRPLPALIFMSRWLQVPLYLGLIVAQAVYVFLFLKEVWHLLSHATS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDEISVMLAVLGLIDVVMISNLLIMVIVGGYETFVSRLGIEGHPDEPEWLDHVNAGVLKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCHHHHH
KLSMALISISSIHLLKTFINPDQHTMHAIMWQVIIHVSFLVSALVMAWVDRLTTHTHPAH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FHEQHARDAHAPAANEPRKPAEAAVNA
HHHHHHHHCCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
SAPHSPGRPARRPLRPLPALIFMSRWLQVPLYLGLIVAQAVYVFLFLKEVWHLLSHATS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDEISVMLAVLGLIDVVMISNLLIMVIVGGYETFVSRLGIEGHPDEPEWLDHVNAGVLKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCHHHHH
KLSMALISISSIHLLKTFINPDQHTMHAIMWQVIIHVSFLVSALVMAWVDRLTTHTHPAH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FHEQHARDAHAPAANEPRKPAEAAVNA
HHHHHHHHCCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]