| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066880
Identifier: 78066880
GI number: 78066880
Start: 2478209
End: 2478583
Strand: Direct
Name: 78066880
Synonym: Bcep18194_A5411
Alternate gene names: NA
Gene position: 2478209-2478583 (Clockwise)
Preceding gene: 78066879
Following gene: 78066890
Centisome position: 67.09
GC content: 69.07
Gene sequence:
>375_bases ATGAATCGCCCACTTCATCGACCGTTTCATCGACCGTTCCGCACCATCGTCCTGACGAGCGTTGCCGCCGGCACGCTCGC ACTCGCCGGCTGCGCGATGCCGCCGCCGACGTCCACGATCCTGAGCCGCCTGCCCGAACCCGGTGCATCGGGCGGCCAGC CGCCCGCGCTGTCGAGCGCCGAACGCAAGCGCTATGACGAGATCGACCAGCAGGTGCTGCGCGAACAGAACAGCGCGATG GCAGCCGAGGCCGCCGCGCGCGCGTGGGCCTATTACTCGCCGCCGCCGGTGACGGTCTATGGCGGGTATTACGGCGGATG GGGCAATCGCTGGGGCTCGGGCATCAGCTACGGCTACCCGGGATGGTGGTGGTGA
Upstream 100 bases:
>100_bases GCATAATGACGCACGAGCGTCGCACGCACGGCTCCGGCGCCGAAGTCACGCACTTCGGCGCAAGCCGCTTCCCGTCGTCG GCGTGCTGCAGGAGAAACAC
Downstream 100 bases:
>100_bases GCGTGCATCGCTCAGCCGATTGATTACCGGCAGGAAATAAAAAAGCGCGGCATTTCCCGCGCTTTTTCAATGGATTCGAG CCATCGCGCTCAGTGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNRPLHRPFHRPFRTIVLTSVAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPALSSAERKRYDEIDQQVLREQNSAM AAEAAARAWAYYSPPPVTVYGGYYGGWGNRWGSGISYGYPGWWW
Sequences:
>Translated_124_residues MNRPLHRPFHRPFRTIVLTSVAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPALSSAERKRYDEIDQQVLREQNSAM AAEAAARAWAYYSPPPVTVYGGYYGGWGNRWGSGISYGYPGWWW >Mature_124_residues MNRPLHRPFHRPFRTIVLTSVAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPALSSAERKRYDEIDQQVLREQNSAM AAEAAARAWAYYSPPPVTVYGGYYGGWGNRWGSGISYGYPGWWW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13553; Mature: 13553
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPLHRPFHRPFRTIVLTSVAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPALSSA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCH ERKRYDEIDQQVLREQNSAMAAEAAARAWAYYSPPPVTVYGGYYGGWGNRWGSGISYGYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC GWWW CCCC >Mature Secondary Structure MNRPLHRPFHRPFRTIVLTSVAAGTLALAGCAMPPPTSTILSRLPEPGASGGQPPALSSA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCH ERKRYDEIDQQVLREQNSAMAAEAAARAWAYYSPPPVTVYGGYYGGWGNRWGSGISYGYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC GWWW CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA