| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78066861
Identifier: 78066861
GI number: 78066861
Start: 2458299
End: 2459921
Strand: Direct
Name: 78066861
Synonym: Bcep18194_A5392
Alternate gene names: NA
Gene position: 2458299-2459921 (Clockwise)
Preceding gene: 78066860
Following gene: 78066863
Centisome position: 66.55
GC content: 65.68
Gene sequence:
>1623_bases ATGTTACGGCTAAGCGAAATTAAACTCCCCCTCGACCATCCCGAGAGCGCGCTCGAGGCCGCGATTCGCGAGCGCCTCGC GGAGCTTGGCGTGGCCGCGGACGGCCTCCTCCGCTACACCGTGTTCCGCCGTGCGCACGATGCGCGCAAGCGCGCCGACA TCAAGCTCACGTATATCGTCGATGTCGAAGTCACGGACGAAGCGGCCGCGATCAAGCGCCTCGCCGGCAAGCCGCATTGC GGCGTGACGCCCGACATGGCGTACCACTTCGTCACGAAGGCGCCCGAGCACGGCAATTTCCTGCGCCCGGTCGTGATCGG CATGGGGCCGTGCGGCCTGTTCGCGGGGCTGATCCTCGCGCAGATGGGCTTCCGCCCCATCATCCTCGAACGCGGCAAGG CCGTGCGCGAGCGCACCAAGGACACCTTCGGCCTGTGGCGCAAGAGCGTGCTCAACCCCGAATCCAACGTGCAGTTCGGC GAAGGCGGCGCCGGGACGTTTTCCGACGGCAAGCTGTACAGCCAGATCAAGGATCCGAACCACTATGGCCGCAAGGTGCT GGACGAATTCGTCAAGGCCGGGGCGCCGGACGACATCCTGTACCTGAGCCGGCCGCACATCGGCACGTTCCGACTCGTCA GCATGGTGGAAAAGATGCGCGCGTCCATCCACGAGCTGGGTGGTGAAGTGCGTTTCGAAACGCGGGTCGACGACATCGAG ATCGATCAGGGCAAGGTCCGCTCGCTGAAGCTCTCGAACGGCGAAACGCTGCAATGCGACCACGTGGTGCTGGCCGTGGG CCACAGCGCGCGCGATACCTTCCAGATGCTGCACGATCGCGGTGTCTATATCGAAGCCAAGCCGTTCTCGCTGGGTTTCC GCATCGAGCATCCGCAGGGGCTGATCGATCGCAGCCGCTTCGGCAAGTTCGCGGGCCACAAGCAGCTCGGTGCGGCCGAC TACAAGGTGGTGCACCACAGCAGCAATGGCCGCGCCGTCTACAGCTTCTGCATGTGCCCCGGCGGCACGGTAGTCGCGGC GACCTCCGAGCCGGGCCGCGTAGTCACCAACGGCATGAGCCAGTACTCGCGGGCCGAGCGCAATGCGAATGCGGGCATCG TCGTCGGCATCACGCCGGACGACTATCCCGGCGGCCCGCTGGCGGGCATCGCGTTCCAGCGCAAATGGGAAGAGCGCGCG TTCGAACTCGGCGGCGGCGATTACCGCGCACCGGGCCAGTTGGTCGGCGATTTCATCGCCGGCCGGCCGTCGACGTCGCT CGGCTCCGTGGAGCCGTCGTACAAGCCGGGCGTGAACCCGACCGATCTCAGCACCGCGCTGCCGGACTACGTGATCGAAG CGATTCGCGAAGCCCTCCCCGAGATCGACAAGAAGATCGCCGGCTTCGCGATGCATGACGCGGTGCTCACCGGTGTCGAG ACGCGTACGTCGTCGCCGATCCGGATTCGACGCAAGGACGATTACCAGAGCATGAACGTCGAAGGCTTGTATCCGGCCGG TGAAGGTGCGGGGTATGCCGGCGGTATTTATTCGGCGGCGATCGACGGGATCGAAGTCGCGCAGGCGGTGGCGCTCAGCA TGGCGTCCGCGCAAACCGCCTAA
Upstream 100 bases:
>100_bases TGCGTCCGGCATCCCCACACGGCGAACAACACCGCCGGCCCGCCGGCCCCCGCCCGTATCAACACCGCCACGACGCCGTG GCAATCGCATCCGAGTCCCC
Downstream 100 bases:
>100_bases GGCGCCGGACAGCATCGGCGCGCAGAGATCGCGCATCGCGTGTGGCCTGCCCTGGCGGGCCGCACGCGGATGATGCAGCA GTACTTATTGCCATATCTGA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MLRLSEIKLPLDHPESALEAAIRERLAELGVAADGLLRYTVFRRAHDARKRADIKLTYIVDVEVTDEAAAIKRLAGKPHC GVTPDMAYHFVTKAPEHGNFLRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG EGGAGTFSDGKLYSQIKDPNHYGRKVLDEFVKAGAPDDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE IDQGKVRSLKLSNGETLQCDHVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD YKVVHHSSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA FELGGGDYRAPGQLVGDFIAGRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSMASAQTA
Sequences:
>Translated_540_residues MLRLSEIKLPLDHPESALEAAIRERLAELGVAADGLLRYTVFRRAHDARKRADIKLTYIVDVEVTDEAAAIKRLAGKPHC GVTPDMAYHFVTKAPEHGNFLRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG EGGAGTFSDGKLYSQIKDPNHYGRKVLDEFVKAGAPDDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE IDQGKVRSLKLSNGETLQCDHVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD YKVVHHSSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA FELGGGDYRAPGQLVGDFIAGRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSMASAQTA >Mature_540_residues MLRLSEIKLPLDHPESALEAAIRERLAELGVAADGLLRYTVFRRAHDARKRADIKLTYIVDVEVTDEAAAIKRLAGKPHC GVTPDMAYHFVTKAPEHGNFLRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG EGGAGTFSDGKLYSQIKDPNHYGRKVLDEFVKAGAPDDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE IDQGKVRSLKLSNGETLQCDHVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD YKVVHHSSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA FELGGGDYRAPGQLVGDFIAGRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSMASAQTA
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 58635; Mature: 58635
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLSEIKLPLDHPESALEAAIRERLAELGVAADGLLRYTVFRRAHDARKRADIKLTYIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE DVEVTDEAAAIKRLAGKPHCGVTPDMAYHFVTKAPEHGNFLRPVVIGMGPCGLFAGLILA EEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHEECCCHHHHHHHHHHH QMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPN HHCCCEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCCH HYGRKVLDEFVKAGAPDDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEE IDQGKVRSLKLSNGETLQCDHVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQG CCCCCEEEEEECCCCEEEECEEEEEECCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCC LIDRSRFGKFAGHKQLGAADYKVVHHSSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMS HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH QYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGDYRAPGQLVGDFIA HHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC GRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSMASAQTA CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRLSEIKLPLDHPESALEAAIRERLAELGVAADGLLRYTVFRRAHDARKRADIKLTYIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEE DVEVTDEAAAIKRLAGKPHCGVTPDMAYHFVTKAPEHGNFLRPVVIGMGPCGLFAGLILA EEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHEECCCHHHHHHHHHHH QMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPN HHCCCEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCCH HYGRKVLDEFVKAGAPDDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIE HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEE IDQGKVRSLKLSNGETLQCDHVVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQG CCCCCEEEEEECCCCEEEECEEEEEECCCHHHHHHHHHCCCCEEEECCCEEEEEEECCCC LIDRSRFGKFAGHKQLGAADYKVVHHSSNGRAVYSFCMCPGGTVVAATSEPGRVVTNGMS HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH QYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGDYRAPGQLVGDFIA HHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC GRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRTSSPIRIRRKDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAQAVALSMASAQTA CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]